RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 ECM29Q5VYK3 1845 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 ZNF106Q9H2Y7 1883 aaKnown RBP2.06□□□□□ -2.08
USP47-211ENST00000531513 IGLV3-9A0A075B6K5 115 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 TMEM212A6NML5 194 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 TCL1BO95988 128 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 METTL15P1P0C7V9 234 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 SRP14P37108 136 aaKnown RBP2.06□□□□□ -2.08
USP47-211ENST00000531513 AQP4P55087 323 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 EIF5AP63241 154 aaKnown RBP2.06□□□□□ -2.08
USP47-211ENST00000531513 RELAQ04206 551 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 LTC4SQ16873 150 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 BRMS1LQ5PSV4 323 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 BCL2L15Q5TBC7 163 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 LRRC28Q86X40 367 aaPredicted RBP2.06□□□□□ -2.08
USP47-211ENST00000531513 OR4D11Q8NGI4 311 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 CANT1Q8WVQ1 401 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 HIST1H2BLQ99880 126 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 TIMM21Q9BVV7 248 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 TMEM126AQ9H061 195 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 BAIAP2Q9UQB8 552 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 ARAP1Q96P48 1450 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 ADGRB3O60242 1522 aa2.06□□□□□ -2.08
USP47-211ENST00000531513 GREB1Q4ZG55 1949 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 SDK2Q58EX2 2172 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 A0A0D9SG52 128 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 A0A1B0GX51 115 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 ZNF705FA8MVS1 300 aaPredicted RBP2.05□□□□□ -2.08
USP47-211ENST00000531513 H3BRN7 92 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 J3KT08 172 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 DEGS1O15121 323 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 CST8O60676 142 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 NAPSAO96009 420 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 SHBGP04278 402 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 HTR1AP08908 422 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 BCL2P10415 239 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 COX6A1P12074 109 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 GPX2P18283 190 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 PLCXD2Q0VAA5 305 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 DPPA3Q6W0C5 159 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 CCDC115Q96NT0 180 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 TSC22D3Q99576 134 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 PCTPQ9UKL6 214 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 EPDR1Q9UM22 224 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 RTEL1-TNFRSF6BF6WH68 1400 aa2.05□□□□□ -2.08
USP47-211ENST00000531513 TLCD2A6NGC4 264 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 J3QRE1 110 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 TAX1BP3O14907 124 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 CRYGAP11844 174 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 RNASE4P34096 147 aaKnown RBP2.04□□□□□ -2.08
USP47-211ENST00000531513 SMARCA4P51532 1647 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 POLR2HP52434 150 aaKnown RBP2.04□□□□□ -2.08
USP47-211ENST00000531513 SLC38A11Q08AI6 406 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 RTL8BQ17RB0 113 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 MALRD1Q5VYJ5 2156 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 LCN15Q6UWW0 184 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 DEFB128Q7Z7B8 93 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 IFT20Q8IY31 132 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 CPAMD8Q8IZJ3 1885 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 ST6GALNAC3Q8NDV1 305 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 STAG3L4Q8TBR4 150 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 TEX37Q96LM6 180 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 TXNDC17Q9BRA2 123 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 TTTY12Q9BZ98 90 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 PLXND1Q9Y4D7 1925 aa2.04□□□□□ -2.08
USP47-211ENST00000531513 TRGV10A0A0A0MS01 117 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 TRGC2P03986 189 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 NFYBP25208 207 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 PSG9Q00887 426 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 ZNF345Q14585 488 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 NNATQ16517 81 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 FKBP1CQ5VVH2 108 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 C1orf140Q5VVS0 124 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 AAED1Q7RTV5 226 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 WFDC11Q8NEX6 87 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 OR4E2Q8NGC2 313 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 OR8B3Q8NGG8 313 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 PPTC7Q8NI37 304 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 SPACA4Q8TDM5 124 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 DCANP1Q8TF63 244 aa2.03□□□□□ -2.08
USP47-211ENST00000531513 GPX7Q96SL4 187 aaPredicted RBP2.03□□□□□ -2.08
USP47-211ENST00000531513 PXDNLA1KZ92 1463 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 BCL9O00512 1426 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 TRAV36DV7A0A075B6V5 113 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 A0A087WX48 190 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 C7orf71A4D174 169 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 TMEM189A5PLL7 270 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 M0R378 163 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 SDCBPO00560 298 aaPredicted RBP2.02□□□□□ -2.09
USP47-211ENST00000531513 P0DMU3 169 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 FAM231AP0DMU4 169 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 FAM231CP0DMU5 169 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 AKR1C3P42330 323 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 UBE2BP63146 152 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 PSPHP78330 225 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 EIF3IQ13347 325 aaKnown RBP2.02□□□□□ -2.09
USP47-211ENST00000531513 SPCS2Q15005 226 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 OR8B8Q15620 311 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 SMIM21Q3B7S5 101 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 Q6ZQT0 140 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 PRR15Q8IV56 129 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms