RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 TMEM41BQ5BJD5 291 aa16.27■□□□□ 0.2
TRAPPC4-210ENST00000531290 LRTM2Q8N967 370 aa16.27■□□□□ 0.2
TRAPPC4-210ENST00000531290 S100ZQ8WXG8 99 aa16.27■□□□□ 0.2
TRAPPC4-210ENST00000531290 TMED3Q9Y3Q3 217 aa16.27■□□□□ 0.2
TRAPPC4-210ENST00000531290 U3KQE9 123 aa16.27■□□□□ 0.2
TRAPPC4-210ENST00000531290 IFNA10P01566 189 aa16.26■□□□□ 0.19
TRAPPC4-210ENST00000531290 DHRS2Q13268 280 aa16.26■□□□□ 0.19
TRAPPC4-210ENST00000531290 MORN3Q6PF18 240 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC4-210ENST00000531290 TRPT1Q86TN4 253 aaKnown RBP16.26■□□□□ 0.19
TRAPPC4-210ENST00000531290 DCANP1Q8TF63 244 aa16.26■□□□□ 0.19
TRAPPC4-210ENST00000531290 NPIPB3Q92617 1050 aa16.26■□□□□ 0.19
TRAPPC4-210ENST00000531290 ACY3Q96HD9 319 aa16.26■□□□□ 0.19
TRAPPC4-210ENST00000531290 A6NHS1 94 aa16.25■□□□□ 0.19
TRAPPC4-210ENST00000531290 KNCNA6PVL3 124 aa16.25■□□□□ 0.19
TRAPPC4-210ENST00000531290 RD3LP0DJH9 198 aa16.25■□□□□ 0.19
TRAPPC4-210ENST00000531290 SPP1P10451 314 aa16.25■□□□□ 0.19
TRAPPC4-210ENST00000531290 C4orf46Q504U0 113 aa16.25■□□□□ 0.19
TRAPPC4-210ENST00000531290 C16orf54Q6UWD8 224 aa16.25■□□□□ 0.19
TRAPPC4-210ENST00000531290 COQ8AQ8NI60 647 aa16.25■□□□□ 0.19
TRAPPC4-210ENST00000531290 DTD1Q8TEA8 209 aa16.25■□□□□ 0.19
TRAPPC4-210ENST00000531290 TMEM170AQ8WVE7 144 aa16.25■□□□□ 0.19
TRAPPC4-210ENST00000531290 CCDC32Q9BV29 185 aa16.25■□□□□ 0.19
TRAPPC4-210ENST00000531290 HSPB7Q9UBY9 170 aa16.25■□□□□ 0.19
TRAPPC4-210ENST00000531290 U3KQ87 197 aa16.25■□□□□ 0.19
TRAPPC4-210ENST00000531290 IL4P05112 153 aa16.24■□□□□ 0.19
TRAPPC4-210ENST00000531290 ACTL10Q5JWF8 245 aa16.24■□□□□ 0.19
TRAPPC4-210ENST00000531290 C9orf170A2RU37 121 aa16.23■□□□□ 0.19
TRAPPC4-210ENST00000531290 LYRM1O43325 122 aa16.23■□□□□ 0.19
TRAPPC4-210ENST00000531290 HOXB5P09067 269 aa16.23■□□□□ 0.19
TRAPPC4-210ENST00000531290 SLC25A6P12236 298 aa16.23■□□□□ 0.19
TRAPPC4-210ENST00000531290 LGALS9CQ6DKI2 356 aa16.23■□□□□ 0.19
TRAPPC4-210ENST00000531290 GLMPQ8WWB7 406 aa16.23■□□□□ 0.19
TRAPPC4-210ENST00000531290 RBKSQ9H477 322 aa16.23■□□□□ 0.19
TRAPPC4-210ENST00000531290 FLVCR2Q9UPI3 526 aa16.23■□□□□ 0.19
TRAPPC4-210ENST00000531290 MED6O75586 246 aa16.22■□□□□ 0.19
TRAPPC4-210ENST00000531290 TOMM40O96008 361 aa16.22■□□□□ 0.19
TRAPPC4-210ENST00000531290 IFNA21P01568 189 aa16.22■□□□□ 0.19
TRAPPC4-210ENST00000531290 GIG44P09565 113 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC4-210ENST00000531290 OR4E1P0C645 316 aa16.22■□□□□ 0.19
TRAPPC4-210ENST00000531290 ATP5IP56385 69 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC4-210ENST00000531290 USF2Q15853 346 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC4-210ENST00000531290 PSMG4Q5JS54 123 aa16.22■□□□□ 0.19
TRAPPC4-210ENST00000531290 C2CD4CQ8TF44 421 aa16.22■□□□□ 0.19
TRAPPC4-210ENST00000531290 RAB40CQ96S21 281 aa16.22■□□□□ 0.19
TRAPPC4-210ENST00000531290 BATF3Q9NR55 127 aa16.22■□□□□ 0.19
TRAPPC4-210ENST00000531290 FAM90A26D6RGX4 464 aa16.21■□□□□ 0.19
TRAPPC4-210ENST00000531290 SNRPD3P62318 126 aaKnown RBP16.21■□□□□ 0.19
TRAPPC4-210ENST00000531290 PSG1P11464 419 aa16.2■□□□□ 0.18
TRAPPC4-210ENST00000531290 MIFP14174 115 aa16.2■□□□□ 0.18
TRAPPC4-210ENST00000531290 ANXA7P20073 488 aaKnown RBP16.2■□□□□ 0.18
TRAPPC4-210ENST00000531290 RPP25LQ8N5L8 163 aaKnown RBP16.2■□□□□ 0.18
TRAPPC4-210ENST00000531290 Q8NAQ8 132 aa16.2■□□□□ 0.18
TRAPPC4-210ENST00000531290 PTTG2Q9NZH5 202 aa16.2■□□□□ 0.18
TRAPPC4-210ENST00000531290 PFDN2Q9UHV9 154 aa16.2■□□□□ 0.18
TRAPPC4-210ENST00000531290 IGHV4-28A0A0C4DH34 117 aa16.19■□□□□ 0.18
TRAPPC4-210ENST00000531290 PLA2G10O15496 165 aa16.19■□□□□ 0.18
TRAPPC4-210ENST00000531290 BUB3O43684 328 aa16.19■□□□□ 0.18
TRAPPC4-210ENST00000531290 C4BPBP20851 252 aa16.19■□□□□ 0.18
TRAPPC4-210ENST00000531290 BTCP35070 178 aa16.19■□□□□ 0.18
TRAPPC4-210ENST00000531290 RPP30P78346 268 aaKnown RBP16.19■□□□□ 0.18
TRAPPC4-210ENST00000531290 GGNBP1Q5YKI7 109 aa16.19■□□□□ 0.18
TRAPPC4-210ENST00000531290 SIGLEC15Q6ZMC9 328 aa16.19■□□□□ 0.18
TRAPPC4-210ENST00000531290 OR51G1Q8NGK1 321 aa16.19■□□□□ 0.18
TRAPPC4-210ENST00000531290 CIB3Q96Q77 187 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC4-210ENST00000531290 HRH4Q9H3N8 390 aa16.19■□□□□ 0.18
TRAPPC4-210ENST00000531290 NRN1Q9NPD7 142 aa16.19■□□□□ 0.18
TRAPPC4-210ENST00000531290 PITX3O75364 302 aa16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 RBMY1A1P0DJD3 496 aaKnown RBP16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 RBMY1CP0DJD4 496 aa16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 GPX4P36969 197 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 TCTAP57738 103 aa16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 NUTF2P61970 127 aaKnown RBP16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 RAB11AP62491 216 aa16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 ZNF846Q147U1 533 aa16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 RBMY1FQ15415 496 aaKnown RBP16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 MZT2BQ6NZ67 158 aa16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 WDR12Q9GZL7 423 aaKnown RBP16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 C20orf85Q9H1P6 137 aa16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 SEPSECSQ9HD40 501 aaKnown RBP16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 CLEC5AQ9NY25 188 aa16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 TBC1D24Q9ULP9 559 aa16.18■□□□□ 0.18
TRAPPC4-210ENST00000531290 ZFP92A6NM28 416 aa16.17■□□□□ 0.18
TRAPPC4-210ENST00000531290 ZNF705EA8MWA4 302 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC4-210ENST00000531290 C11orf94C9JXX5 98 aa16.17■□□□□ 0.18
TRAPPC4-210ENST00000531290 DEDDO75618 318 aa16.17■□□□□ 0.18
TRAPPC4-210ENST00000531290 TCRBP04435 133 aa16.17■□□□□ 0.18
TRAPPC4-210ENST00000531290 NUP62P37198 522 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC4-210ENST00000531290 PBDC1Q9BVG4 233 aa16.17■□□□□ 0.18
TRAPPC4-210ENST00000531290 PAIP2BQ9ULR5 123 aaKnown RBP16.17■□□□□ 0.18
TRAPPC4-210ENST00000531290 IGLL5B9A064 214 aa16.16■□□□□ 0.18
TRAPPC4-210ENST00000531290 RNF125Q96EQ8 232 aa16.16■□□□□ 0.18
TRAPPC4-210ENST00000531290 SLC35E1Q96K37 410 aa16.16■□□□□ 0.18
TRAPPC4-210ENST00000531290 FAM240BA0A1B0GVZ2 78 aa16.15■□□□□ 0.18
TRAPPC4-210ENST00000531290 WRBO00258 174 aa16.15■□□□□ 0.18
TRAPPC4-210ENST00000531290 SYNGR2O43760 224 aa16.15■□□□□ 0.18
TRAPPC4-210ENST00000531290 ADAP1O75689 374 aa16.15■□□□□ 0.18
TRAPPC4-210ENST00000531290 FABP1P07148 127 aa16.15■□□□□ 0.18
TRAPPC4-210ENST00000531290 IAPPP10997 89 aa16.15■□□□□ 0.18
TRAPPC4-210ENST00000531290 GAMTQ14353 236 aa16.15■□□□□ 0.18
TRAPPC4-210ENST00000531290 C1QTNF4Q9BXJ3 329 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms