RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 TMEM17Q86X19 198 aa5.61□□□□□ -1.51
CD44-232ENST00000531118 OR4B1Q8NGF8 309 aa5.61□□□□□ -1.51
CD44-232ENST00000531118 GNPNAT1Q96EK6 184 aaPredicted RBP5.61□□□□□ -1.51
CD44-232ENST00000531118 RNF125Q96EQ8 232 aa5.61□□□□□ -1.51
CD44-232ENST00000531118 TMEM208Q9BTX3 173 aa5.61□□□□□ -1.51
CD44-232ENST00000531118 SLC5A7Q9GZV3 580 aa5.61□□□□□ -1.51
CD44-232ENST00000531118 SCPEP1Q9HB40 452 aa5.61□□□□□ -1.51
CD44-232ENST00000531118 MRPL36Q9P0J6 103 aaKnown RBP5.61□□□□□ -1.51
CD44-232ENST00000531118 V9GY05 133 aa5.61□□□□□ -1.51
CD44-232ENST00000531118 TRAV26-1A0A087WT03 109 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 TRAV1-2A0A0B4J238 106 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 TRDV1A0A1B0GX56 115 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 TMEM235A6NFC5 223 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 ZNF705GA8MUZ8 300 aaPredicted RBP5.6□□□□□ -1.51
CD44-232ENST00000531118 M0QYG6 137 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 CLN5O75503 358 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 SCGB2A1O75556 95 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 KRASP01116 189 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 RLN1P04808 185 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 PTHLHP12272 177 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 PSMB9P28065 219 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 PSG9Q00887 426 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 ARL6IP1Q15041 203 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 TIGITQ495A1 244 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 HACD4Q5VWC8 232 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 CADM3Q8N126 398 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 LGALS14Q8TCE9 139 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 RXFP4Q8TDU9 374 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 TMEM230Q96A57 120 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 TSC22D3Q99576 134 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 NDUFB11Q9NX14 153 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 FKBP11Q9NYL4 201 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 SSR3Q9UNL2 185 aa5.6□□□□□ -1.51
CD44-232ENST00000531118 RRP15Q9Y3B9 282 aaKnown RBP5.6□□□□□ -1.51
CD44-232ENST00000531118 IGLV5-52A0A0A0MRZ9 124 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 A0A0J9YY99 117 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 METTL21EPA6NDL7 271 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 CBY3A6NI87 242 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 F6UB75 175 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 SSX5O60225 188 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 INSP01308 110 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 IGKV1-17P01599 117 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 PRM2P04554 102 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 P0C879 139 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 RAB3BP20337 219 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 F2RP25116 425 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 TSPOP30536 169 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 LPAR6P43657 344 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 PAX9P55771 341 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 GNG2P59768 71 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 FCN2Q15485 313 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 SPARTQ8N0X7 666 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 COQ8AQ8NI60 647 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 FCAMRQ8WWV6 532 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 IGF2BP2-AS1Q96M15 143 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 VCX3AQ9NNX9 186 aa5.59□□□□□ -1.51
CD44-232ENST00000531118 FAT4Q6V0I7 4981 aa5.59□□□□□ -1.52
CD44-232ENST00000531118 IFITM5A6NNB3 132 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 SOCS3O14543 225 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 SIVA1O15304 175 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 GSTZ1O43708 216 aaPredicted RBP5.58□□□□□ -1.52
CD44-232ENST00000531118 M6PRP20645 277 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 PSMB3P49720 205 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 CDNFQ49AH0 187 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 SPINK9Q5DT21 86 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 FAM78BQ5VT40 261 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 SPATA31B1PQ5VZV4 182 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 C22orf42Q6IC83 251 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 NFE4Q86UQ8 179 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 OR4X1Q8NH49 305 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 GPR146Q96CH1 333 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 LINC00052Q96N35 136 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 ATG5Q9H1Y0 275 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 FAM30AQ9NZY2 134 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 TNFRSF18Q9Y5U5 241 aa5.58□□□□□ -1.52
CD44-232ENST00000531118 A0A0J9YX75 114 aa5.57□□□□□ -1.52
CD44-232ENST00000531118 A8MTW9 85 aa5.57□□□□□ -1.52
CD44-232ENST00000531118 CORTO00230 105 aa5.57□□□□□ -1.52
CD44-232ENST00000531118 BUB3O43684 328 aa5.57□□□□□ -1.52
CD44-232ENST00000531118 SCGNO76038 276 aa5.57□□□□□ -1.52
CD44-232ENST00000531118 RNASE2P10153 161 aaKnown RBP5.57□□□□□ -1.52
CD44-232ENST00000531118 OPRK1P41145 380 aa5.57□□□□□ -1.52
CD44-232ENST00000531118 OR10A3P58181 314 aa5.57□□□□□ -1.52
CD44-232ENST00000531118 KRTAP10-4P60372 401 aaPredicted RBP5.57□□□□□ -1.52
CD44-232ENST00000531118 ERHP84090 104 aaKnown RBP5.57□□□□□ -1.52
CD44-232ENST00000531118 OR5I1Q13606 314 aa5.57□□□□□ -1.52
CD44-232ENST00000531118 AMTNQ6UX39 209 aa5.57□□□□□ -1.52
CD44-232ENST00000531118 BAP18Q8IXM2 172 aa5.57□□□□□ -1.52
CD44-232ENST00000531118 BEST4Q8NFU0 473 aa5.57□□□□□ -1.52
CD44-232ENST00000531118 TSPAN14Q8NG11 270 aa5.57□□□□□ -1.52
CD44-232ENST00000531118 ABHD1Q96SE0 405 aa5.57□□□□□ -1.52
CD44-232ENST00000531118 WDR12Q9GZL7 423 aaKnown RBP5.57□□□□□ -1.52
CD44-232ENST00000531118 TXNL4BQ9NX01 149 aaKnown RBP5.57□□□□□ -1.52
CD44-232ENST00000531118 ZNF701M0R085 212 aaPredicted RBP5.56□□□□□ -1.52
CD44-232ENST00000531118 M0R2Z0 102 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 CRXO43186 299 aaPredicted RBP5.56□□□□□ -1.52
CD44-232ENST00000531118 TNFAIP8O95379 198 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 IL4P05112 153 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 IGLC1P0CG04 106 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 AZU1P20160 251 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms