RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 HIVEP2P31629 2446 aa10.09□□□□□ -0.79
SCN3B-206ENST00000530277 ZNF138P52744 262 aa10.09□□□□□ -0.79
SCN3B-206ENST00000530277 FXYD7P58549 80 aa10.09□□□□□ -0.79
SCN3B-206ENST00000530277 FBLL1A6NHQ2 334 aaKnown RBP10.09□□□□□ -0.79
SCN3B-206ENST00000530277 PLA2G2CQ5R387 149 aa10.09□□□□□ -0.79
SCN3B-206ENST00000530277 STXBP6Q8NFX7 210 aa10.09□□□□□ -0.79
SCN3B-206ENST00000530277 LOC105371242A0A075B767 164 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 HLA-DQA1P01909 254 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 ZNF788Q6ZQV5 615 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 C18orf15Q96N68 181 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 KLK15Q9H2R5 256 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 PRDM13Q9H4Q3 707 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 OR2T8A6NH00 312 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 TDGF1P13385 188 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 TWIST1Q15672 202 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 Q5PR19 223 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 PPP1R27Q86WC6 154 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 C5orf30Q96GV9 206 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 ABCA12Q86UK0 2595 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 JMJD1CQ15652 2540 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 F5H697 171 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 IGHV2-5P01817 119 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 LIPFP07098 398 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 SCRT1Q9BWW7 348 aa10.08□□□□□ -0.8
SCN3B-206ENST00000530277 MBD3L4A6NDZ8 208 aaPredicted RBP10.07□□□□□ -0.8
SCN3B-206ENST00000530277 MBD3L3A6NE82 208 aaPredicted RBP10.07□□□□□ -0.8
SCN3B-206ENST00000530277 MBD3L5A6NJ08 208 aaPredicted RBP10.07□□□□□ -0.8
SCN3B-206ENST00000530277 GPR183P32249 361 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 Q6ZVH6 145 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 MBD3L2Q8NHZ7 208 aaPredicted RBP10.07□□□□□ -0.8
SCN3B-206ENST00000530277 DIRC2Q96SL1 478 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 TXNDC17Q9BRA2 123 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 SNHG12Q9BXW3 62 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 TMEM133Q9H2Q1 129 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 RABAC1Q9UI14 185 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.07□□□□□ -0.8
SCN3B-206ENST00000530277 LEPROTL1O95214 131 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 IGKV3-20P01619 116 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 ZCCHC14Q8WYQ9 949 aaKnown RBP10.07□□□□□ -0.8
SCN3B-206ENST00000530277 NRN1Q9NPD7 142 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 C15orf65H3BRN8 121 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 M0R3E3 92 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 PFN1P07737 140 aaKnown RBP10.07□□□□□ -0.8
SCN3B-206ENST00000530277 GRNP28799 593 aaKnown RBP10.07□□□□□ -0.8
SCN3B-206ENST00000530277 TBR1Q16650 682 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 Q6ZS92 163 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 Q9H3A6 140 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 DKK4Q9UBT3 224 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 B9A039 149 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 LMO1P25800 156 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 NMUP48645 174 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 C17orf58Q2M2W7 97 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 CIARTQ8N365 385 aaPredicted RBP10.07□□□□□ -0.8
SCN3B-206ENST00000530277 TMEM208Q9BTX3 173 aa10.07□□□□□ -0.8
SCN3B-206ENST00000530277 MTORP42345 2549 aa10.06□□□□□ -0.8
SCN3B-206ENST00000530277 NPIPB11E5RHQ5 1161 aa10.06□□□□□ -0.8
SCN3B-206ENST00000530277 TMEM178BH3BS89 294 aa10.06□□□□□ -0.8
SCN3B-206ENST00000530277 IGLV2-14P01704 120 aa10.06□□□□□ -0.8
SCN3B-206ENST00000530277 PAFAH1B2P68402 229 aa10.06□□□□□ -0.8
SCN3B-206ENST00000530277 JOSD1Q15040 202 aaPredicted RBP10.06□□□□□ -0.8
SCN3B-206ENST00000530277 C22orf34Q6ZV56 151 aa10.06□□□□□ -0.8
SCN3B-206ENST00000530277 PMS2P5A8MQ11 134 aa10.06□□□□□ -0.8
SCN3B-206ENST00000530277 TM4SF5O14894 197 aa10.06□□□□□ -0.8
SCN3B-206ENST00000530277 GGCTO75223 188 aaKnown RBP10.06□□□□□ -0.8
SCN3B-206ENST00000530277 IGHV3-11P01762 117 aa10.06□□□□□ -0.8
SCN3B-206ENST00000530277 PF4V1P10720 104 aa10.06□□□□□ -0.8
SCN3B-206ENST00000530277 SSBP2P81877 361 aaPredicted RBP10.06□□□□□ -0.8
SCN3B-206ENST00000530277 ELOVL5Q9NYP7 299 aa10.06□□□□□ -0.8
SCN3B-206ENST00000530277 DPM3Q9P2X0 92 aa10.06□□□□□ -0.8
SCN3B-206ENST00000530277 Q8NFD4 153 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 HCFC1P51610 2035 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 KIAA1549Q9HCM3 1950 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 A0A1B0GW64 132 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 H0YJW9 148 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 MT-ND6P03923 174 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 PSG1P11464 419 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 ZNF672Q499Z4 452 aaPredicted RBP10.05□□□□□ -0.8
SCN3B-206ENST00000530277 TMEM189A5PLL7 270 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 E7EQL1 145 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 F2Z2F3 143 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 FRMD6-AS1P0C7T7 363 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 IGHV1-8P0DP01 117 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 NPPCP23582 126 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 TM4SF20Q53R12 229 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 ODF3L1Q8IXM7 274 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 WFDC12Q8WWY7 111 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 MAP1LC3CQ9BXW4 147 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 BET1LQ9NYM9 111 aa10.05□□□□□ -0.8
SCN3B-206ENST00000530277 RNASE2P10153 161 aaKnown RBP10.04□□□□□ -0.8
SCN3B-206ENST00000530277 RELQ04864 619 aaPredicted RBP10.04□□□□□ -0.8
SCN3B-206ENST00000530277 RIGQ13278 110 aa10.04□□□□□ -0.8
SCN3B-206ENST00000530277 COL5A1-AS1Q5SY13 56 aa10.04□□□□□ -0.8
SCN3B-206ENST00000530277 LYPD6BQ8NI32 183 aa10.04□□□□□ -0.8
SCN3B-206ENST00000530277 TMEM191AQ9H0A3 160 aa10.04□□□□□ -0.8
SCN3B-206ENST00000530277 A1L4Q6 167 aa10.04□□□□□ -0.8
SCN3B-206ENST00000530277 CORTO00230 105 aa10.04□□□□□ -0.8
SCN3B-206ENST00000530277 GOSR1O95249 250 aa10.04□□□□□ -0.8
SCN3B-206ENST00000530277 CKS2P33552 79 aa10.04□□□□□ -0.8
SCN3B-206ENST00000530277 TMEM219Q86XT9 240 aa10.04□□□□□ -0.8
SCN3B-206ENST00000530277 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms