RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 ARMC1Q9NVT9 282 aa4.39□□□□□ -1.71
SVIP-204ENST00000530199 RFNGQ9Y644 331 aa4.39□□□□□ -1.71
SVIP-204ENST00000530199 S4R3C0 116 aa4.39□□□□□ -1.71
SVIP-204ENST00000530199 NDUFA4O00483 81 aa4.38□□□□□ -1.71
SVIP-204ENST00000530199 APOA2P02652 100 aa4.38□□□□□ -1.71
SVIP-204ENST00000530199 MAS1P04201 325 aa4.38□□□□□ -1.71
SVIP-204ENST00000530199 CRYGCP07315 174 aa4.38□□□□□ -1.71
SVIP-204ENST00000530199 UBCP0CG48 685 aaKnown RBP4.38□□□□□ -1.71
SVIP-204ENST00000530199 HIST1H1BP16401 226 aaKnown RBP4.38□□□□□ -1.71
SVIP-204ENST00000530199 DAD1P61803 113 aa4.38□□□□□ -1.71
SVIP-204ENST00000530199 ARFRP1Q13795 201 aa4.38□□□□□ -1.71
SVIP-204ENST00000530199 TNXAQ16473 311 aa4.38□□□□□ -1.71
SVIP-204ENST00000530199 ZSCAN26Q16670 478 aa4.38□□□□□ -1.71
SVIP-204ENST00000530199 ZNF502Q8TBZ5 544 aa4.38□□□□□ -1.71
SVIP-204ENST00000530199 RHPN1-AS1Q9BWJ2 59 aa4.38□□□□□ -1.71
SVIP-204ENST00000530199 TTTY10Q9BZA0 68 aa4.38□□□□□ -1.71
SVIP-204ENST00000530199 SLC25A22Q9H936 323 aa4.38□□□□□ -1.71
SVIP-204ENST00000530199 AP3M1Q9Y2T2 418 aa4.38□□□□□ -1.71
SVIP-204ENST00000530199 MRPS16Q9Y3D3 137 aaKnown RBP4.38□□□□□ -1.71
SVIP-204ENST00000530199 CHTOPQ9Y3Y2 248 aaKnown RBP4.38□□□□□ -1.71
SVIP-204ENST00000530199 LRRC42Q9Y546 428 aa4.38□□□□□ -1.71
SVIP-204ENST00000530199 IGHV7-4-1A0A0J9YVY3 117 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 GEMIN2O14893 280 aaKnown RBP4.37□□□□□ -1.71
SVIP-204ENST00000530199 MAGEB4O15481 346 aaPredicted RBP4.37□□□□□ -1.71
SVIP-204ENST00000530199 SC5DO75845 299 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 RBM11P57052 281 aaKnown RBP4.37□□□□□ -1.71
SVIP-204ENST00000530199 TAS2R19P59542 299 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 CXCR4P61073 352 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 UBE2KP61086 200 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 Q6ZRU5 148 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 OR13C9Q8NGT0 318 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 OR10AC1Q8NH08 325 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 OR52N1Q8NH53 320 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 NEK7Q8TDX7 302 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 GALMQ96C23 342 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 RPUSD4Q96CM3 377 aaKnown RBP4.37□□□□□ -1.71
SVIP-204ENST00000530199 ABHD14BQ96IU4 210 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 PAIP2Q9BPZ3 127 aaKnown RBP4.37□□□□□ -1.71
SVIP-204ENST00000530199 TMEM59Q9BXS4 323 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 PLGRKTQ9HBL7 147 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 SPACA1Q9HBV2 294 aa4.37□□□□□ -1.71
SVIP-204ENST00000530199 IGKV3-7A0A075B6H7 116 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 IGLV11-55A0A075B6I3 123 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 MCRIP1C9JLW8 97 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 GOSR2O14653 212 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 CREBL2O60519 120 aaPredicted RBP4.36□□□□□ -1.71
SVIP-204ENST00000530199 DHFRP00374 187 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 ISG15P05161 165 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 MRPL3P09001 348 aaKnown RBP4.36□□□□□ -1.71
SVIP-204ENST00000530199 RRM2P31350 389 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 ETV1P50549 477 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 NUTF2P61970 127 aaKnown RBP4.36□□□□□ -1.71
SVIP-204ENST00000530199 IFFO1Q0D2I5 559 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 SPANXN2Q5MJ10 180 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 TMEM244Q5VVB8 128 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 NXNL2Q5VZ03 156 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 SCXQ7RTU7 201 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 FAM24BQ8N5W8 94 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 OR10K1Q8NGX5 313 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 ACOT12Q8WYK0 555 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 ZNF414Q96IQ9 312 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 TMEM109Q9BVC6 243 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 MS4A6AQ9H2W1 248 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 PRR34Q9NV39 138 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 YTHDF2Q9Y5A9 579 aaKnown RBP4.36□□□□□ -1.71
SVIP-204ENST00000530199 KIF25-AS1Q9Y6Z4 181 aa4.36□□□□□ -1.71
SVIP-204ENST00000530199 TRAV3A0A0B4J244 114 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 SMCO3A2RU48 225 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 FAM231BA6NCW3 169 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 KNCNA6PVL3 124 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 GABRPO00591 440 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 RPP14O95059 124 aaKnown RBP4.35□□□□□ -1.71
SVIP-204ENST00000530199 KRTAP10-12P60413 245 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 RSU1Q15404 277 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 ESRGQ1W209 222 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 VMA21Q3ZAQ7 101 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 UBE2UQ5VVX9 321 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 OR4C5Q8NGB2 326 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 TEX47Q8TBZ9 253 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 MCUR1Q96AQ8 359 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 CPNE2Q96FN4 548 aaPredicted RBP4.35□□□□□ -1.71
SVIP-204ENST00000530199 OR10C1Q96KK4 312 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 KCTD14Q9BQ13 255 aaPredicted RBP4.35□□□□□ -1.71
SVIP-204ENST00000530199 C20orf24Q9BUV8 137 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 CMTM6Q9NX76 183 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 XCL2Q9UBD3 114 aa4.35□□□□□ -1.71
SVIP-204ENST00000530199 BBIP1A8MTZ0 92 aa4.34□□□□□ -1.71
SVIP-204ENST00000530199 DNASE2O00115 360 aaPredicted RBP4.34□□□□□ -1.71
SVIP-204ENST00000530199 MRASO14807 208 aa4.34□□□□□ -1.71
SVIP-204ENST00000530199 ZNF207O43670 478 aaKnown RBP4.34□□□□□ -1.71
SVIP-204ENST00000530199 GLAP06280 429 aa4.34□□□□□ -1.71
SVIP-204ENST00000530199 BTCP35070 178 aa4.34□□□□□ -1.71
SVIP-204ENST00000530199 HMGN3Q15651 99 aa4.34□□□□□ -1.71
SVIP-204ENST00000530199 TNFAIP8L3Q5GJ75 292 aa4.34□□□□□ -1.71
SVIP-204ENST00000530199 ACTL10Q5JWF8 245 aa4.34□□□□□ -1.71
SVIP-204ENST00000530199 C10orf55Q5SWW7 151 aa4.34□□□□□ -1.71
SVIP-204ENST00000530199 TCF24Q7RTU0 167 aa4.34□□□□□ -1.71
SVIP-204ENST00000530199 ARPINQ7Z6K5 226 aa4.34□□□□□ -1.71
SVIP-204ENST00000530199 PUSL1Q8N0Z8 303 aaKnown RBP4.34□□□□□ -1.71
SVIP-204ENST00000530199 MS4A15Q8N5U1 240 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms