RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 TSC22D2O75157 780 aa9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 DFFBO76075 338 aa9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 IL4P05112 153 aa9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 ZNF90Q03938 601 aa9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 IL15RAQ13261 267 aa9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 USF2Q15853 346 aaPredicted RBP9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 LINC00322Q6ZN03 302 aaPredicted RBP9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 THAP8Q8NA92 274 aa9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 OR51G1Q8NGK1 321 aa9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 TRGV9Q99603 122 aa9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 WFDC10AQ9H1F0 79 aa9.46□□□□□ -0.9
CCDC90B-216ENST00000529856 RBMY1BA6NDE4 496 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-216ENST00000529856 RBMY1EA6NEQ0 496 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-216ENST00000529856 FABP1P07148 127 aa9.45□□□□□ -0.9
CCDC90B-216ENST00000529856 HNRNPCP07910 306 aaKnown RBP eCLIP9.45□□□□□ -0.9
CCDC90B-216ENST00000529856 RBMY1DP0C7P1 496 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-216ENST00000529856 PAFAH1B2P68402 229 aa9.45□□□□□ -0.9
CCDC90B-216ENST00000529856 ACOT7LQ6ZUV0 252 aa9.45□□□□□ -0.9
CCDC90B-216ENST00000529856 NARS2Q96I59 477 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-216ENST00000529856 SRD5A3Q9H8P0 318 aa9.45□□□□□ -0.9
CCDC90B-216ENST00000529856 LSM5Q9Y4Y9 91 aaKnown RBP9.45□□□□□ -0.9
CCDC90B-216ENST00000529856 IGKV3-7A0A075B6H7 116 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 L7N2F9 121 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 CCNKO75909 580 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 METTL15P1P0C7V9 234 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 P2RY1P47900 373 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 VAMP2P63027 116 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 HAGHQ16775 308 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 ODF3L2Q3SX64 289 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 OR8G2PQ6IF36 304 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 C16orf54Q6UWD8 224 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 TMEM144Q7Z5S9 345 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 GBGT1Q8N5D6 347 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 OR10P1Q8NGE3 313 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 RNF125Q96EQ8 232 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 GRAMD2BQ96HH9 432 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 FAM110AQ9BQ89 295 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 TM2D3Q9BRN9 247 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 C11orf1Q9H5F2 150 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 RABAC1Q9UI14 185 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 U3KQK5 164 aa9.44□□□□□ -0.9
CCDC90B-216ENST00000529856 HUWE1Q7Z6Z7 4374 aaKnown RBP9.43□□□□□ -0.9
CCDC90B-216ENST00000529856 TRAV2A0A0B4J234 112 aa9.43□□□□□ -0.9
CCDC90B-216ENST00000529856 FNDC10F2Z333 226 aa9.43□□□□□ -0.9
CCDC90B-216ENST00000529856 SIX6O95475 246 aa9.43□□□□□ -0.9
CCDC90B-216ENST00000529856 TFPI2P48307 235 aa9.43□□□□□ -0.9
CCDC90B-216ENST00000529856 CMC4P56277 68 aaPredicted RBP9.43□□□□□ -0.9
CCDC90B-216ENST00000529856 RPL11P62913 178 aaKnown RBP9.43□□□□□ -0.9
CCDC90B-216ENST00000529856 DLK1P80370 383 aa9.43□□□□□ -0.9
CCDC90B-216ENST00000529856 AKR1C1Q04828 323 aa9.43□□□□□ -0.9
CCDC90B-216ENST00000529856 OR2F1Q13607 317 aa9.43□□□□□ -0.9
CCDC90B-216ENST00000529856 RAB32Q13637 225 aa9.43□□□□□ -0.9
CCDC90B-216ENST00000529856 CITED4Q96RK1 184 aa9.43□□□□□ -0.9
CCDC90B-216ENST00000529856 MS4A6AQ9H2W1 248 aa9.43□□□□□ -0.9
CCDC90B-216ENST00000529856 UBQLN2Q9UHD9 624 aa9.43□□□□□ -0.9
CCDC90B-216ENST00000529856 DNASE2O00115 360 aaPredicted RBP9.42□□□□□ -0.9
CCDC90B-216ENST00000529856 GOSR2O14653 212 aa9.42□□□□□ -0.9
CCDC90B-216ENST00000529856 BUB3O43684 328 aa9.42□□□□□ -0.9
CCDC90B-216ENST00000529856 CFDP00746 253 aaPredicted RBP9.42□□□□□ -0.9
CCDC90B-216ENST00000529856 PVALBP20472 110 aaPredicted RBP9.42□□□□□ -0.9
CCDC90B-216ENST00000529856 EIF2B2P49770 351 aaKnown RBP9.42□□□□□ -0.9
CCDC90B-216ENST00000529856 ARL16Q0P5N6 197 aa9.42□□□□□ -0.9
CCDC90B-216ENST00000529856 WFDC3Q8IUB2 231 aa9.42□□□□□ -0.9
CCDC90B-216ENST00000529856 GLMPQ8WWB7 406 aa9.42□□□□□ -0.9
CCDC90B-216ENST00000529856 PBDC1Q9BVG4 233 aa9.42□□□□□ -0.9
CCDC90B-216ENST00000529856 ZMAT4Q9H898 229 aa9.42□□□□□ -0.9
CCDC90B-216ENST00000529856 NPVFQ9HCQ7 196 aa9.42□□□□□ -0.9
CCDC90B-216ENST00000529856 SMCO3A2RU48 225 aa9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 HELTA6NFD8 242 aa9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 FAM24AA6NFZ4 105 aa9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 DEDDO75618 318 aa9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 PTTG1O95997 202 aa9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 BCAP31P51572 246 aa9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 AP2S1P53680 142 aaPredicted RBP9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 S100A10P60903 97 aa9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 LYZP61626 148 aa9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 RRAS2P62070 204 aaPredicted RBP9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 TMEM182Q6ZP80 229 aaPredicted RBP9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 STPG3Q8N7X2 389 aa9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 RCHY1Q96PM5 261 aa9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 GGACTQ9BVM4 153 aa9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 NMES1Q9C002 83 aa9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 MGAT4CQ9UBM8 478 aa9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 PFDN2Q9UHV9 154 aa9.41□□□□□ -0.9
CCDC90B-216ENST00000529856 LOC102724200A0A096LPH7 203 aaPredicted RBP9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 K7EQG2 157 aa9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 SSNA1O43805 119 aa9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 GATA2P23769 480 aaPredicted RBP9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 NUP62P37198 522 aaPredicted RBP9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 CAV2P51636 162 aa9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 CYCSP99999 105 aaKnown RBP9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 CYP2G1PQ6ZSU1 146 aa9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 APRG1Q8IVJ8 170 aa9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 BPIFCQ8NFQ6 507 aa9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 STXBP6Q8NFX7 210 aa9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 SPATA25Q9BR10 227 aa9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 GGTLC1Q9BX51 225 aa9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 MAP6D1Q9H9H5 199 aa9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 LYRM2Q9NU23 88 aaPredicted RBP9.4□□□□□ -0.9
CCDC90B-216ENST00000529856 CST7O76096 145 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms