RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 NANOGP1Q8N7R0 232 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 GDPD1Q8N9F7 314 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 CCDC71LQ8N9Z2 235 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 BPIFB6Q8NFQ5 453 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 VN1R17PQ8TDU5 208 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 SCARB1Q8WTV0 552 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 ST8SIA2Q92186 375 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 QTRT1Q9BXR0 403 aaKnown RBP2.53□□□□□ -2
PTPRC-213ENST00000529828 COMMD5Q9GZQ3 224 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 MS4A6AQ9H2W1 248 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 SCN3BQ9NY72 215 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 THYN1Q9P016 225 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 RABAC1Q9UI14 185 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 KLK9Q9UKQ9 250 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 OR2W1Q9Y3N9 320 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 AGRNO00468 2067 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 A0A1B0GW15 77 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 C15orf62A8K5M9 175 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 K7EIM0 57 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 UPK2O00526 184 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 ST8SIA3O43173 380 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 EIF4EBP3O60516 100 aaPredicted RBP2.52□□□□□ -2.01
PTPRC-213ENST00000529828 SNAPC5O75971 98 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 HRASP01112 189 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 HLA-DQB1P01920 261 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF688P0C7X2 276 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 OR10A3P58181 314 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 EIF4EBP1Q13541 118 aaPredicted RBP2.52□□□□□ -2.01
PTPRC-213ENST00000529828 VAMP3Q15836 100 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 CDNFQ49AH0 187 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 RNASE10Q5GAN6 216 aaKnown RBP2.52□□□□□ -2.01
PTPRC-213ENST00000529828 ACTL10Q5JWF8 245 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 UBE2UQ5VVX9 321 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 FAM90A2PQ658T7 463 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 TMEM91Q6ZNR0 172 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 TRPT1Q86TN4 253 aaKnown RBP2.52□□□□□ -2.01
PTPRC-213ENST00000529828 MTURNQ8N3F0 131 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 MS4A15Q8N5U1 240 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 OR10R2Q8NGX6 335 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 NUDCD2Q8WVJ2 157 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 SECTM1Q8WVN6 248 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 SAT2Q96F10 170 aaPredicted RBP2.52□□□□□ -2.01
PTPRC-213ENST00000529828 C14orf144Q96I85 54 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 SRRQ9GZT4 340 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 CCL28Q9NRJ3 127 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 BET1LQ9NYM9 111 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 PSORS1C1Q9UIG5 152 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 NSG2Q9Y328 171 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 LRP1Q07954 4544 aaKnown RBP2.52□□□□□ -2.01
PTPRC-213ENST00000529828 FLG2Q5D862 2391 aaPredicted RBP2.52□□□□□ -2.01
PTPRC-213ENST00000529828 TRAV14DV4A0A0A6YYC5 116 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 TEX50A0A1B0GTY4 177 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF705EA8MWA4 302 aaPredicted RBP2.52□□□□□ -2.01
PTPRC-213ENST00000529828 K7EMT4 169 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 SERPINE2P07093 398 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 CTSGP08311 255 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 TRAPPC2P0DI81 140 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 TRAPPC2BP0DI82 140 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 SCGB1A1P11684 91 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 GADD45AP24522 165 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 PSMA1P25786 263 aaKnown RBP2.52□□□□□ -2.01
PTPRC-213ENST00000529828 RPS19P39019 145 aaKnown RBP2.52□□□□□ -2.01
PTPRC-213ENST00000529828 CCR6P51684 374 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 FGF8P55075 233 aaPredicted RBP2.52□□□□□ -2.01
PTPRC-213ENST00000529828 FXYD4P59646 89 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 PAFAH1B2P68402 229 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 MLANAQ16655 118 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 TRIQKQ629K1 86 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 SPSB3Q6PJ21 355 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 ZFP82Q8N141 532 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 HSD17B11Q8NBQ5 300 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 DMBX1Q8NFW5 382 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 STXBP6Q8NFX7 210 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 OR51H1Q8NH63 302 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 SFT2D1Q8WV19 159 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 SLC25A46Q96AG3 418 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 SMIM12Q96EX1 92 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 HSD17B10Q99714 261 aaKnown RBP2.52□□□□□ -2.01
PTPRC-213ENST00000529828 COPZ2Q9P299 210 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 XCL2Q9UBD3 114 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 RAB22AQ9UL26 194 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 F11RQ9Y624 299 aaKnown RBP2.52□□□□□ -2.01
PTPRC-213ENST00000529828 FAT3Q8TDW7 4589 aa2.52□□□□□ -2.01
PTPRC-213ENST00000529828 IGHV3OR16-12A0A075B7B8 117 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 TMEM235A6NFC5 223 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 K7EP13 123 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 CYB5BO43169 146 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 CD74P04233 296 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 EIF4EP06730 217 aaKnown RBP2.51□□□□□ -2.01
PTPRC-213ENST00000529828 TMBIM6P55061 237 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 CMC4P56277 68 aaPredicted RBP2.51□□□□□ -2.01
PTPRC-213ENST00000529828 C5orf47Q569G3 176 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF773Q6PK81 442 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF66Q6ZN08 573 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 SPATA12Q7Z6I5 190 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 MRPL52Q86TS9 123 aaKnown RBP2.51□□□□□ -2.01
PTPRC-213ENST00000529828 C8orf59Q8N0T1 100 aaPredicted RBP2.51□□□□□ -2.01
PTPRC-213ENST00000529828 DYNC2LI1Q8TCX1 351 aa2.51□□□□□ -2.01
PTPRC-213ENST00000529828 PINX1Q96BK5 328 aaKnown RBP2.51□□□□□ -2.01
PTPRC-213ENST00000529828 GGACTQ9BVM4 153 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms