RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 RD3LP0DJH9 198 aa11.41□□□□□ -0.58
CCDC90B-215ENST00000529745 PSG1P11464 419 aa11.41□□□□□ -0.58
CCDC90B-215ENST00000529745 LYL1P12980 280 aa11.41□□□□□ -0.58
CCDC90B-215ENST00000529745 ANXA7P20073 488 aaKnown RBP11.41□□□□□ -0.58
CCDC90B-215ENST00000529745 OR8G2PQ6IF36 304 aa11.41□□□□□ -0.58
CCDC90B-215ENST00000529745 THAP8Q8NA92 274 aa11.41□□□□□ -0.58
CCDC90B-215ENST00000529745 OR51G1Q8NGK1 321 aa11.41□□□□□ -0.58
CCDC90B-215ENST00000529745 S100ZQ8WXG8 99 aa11.41□□□□□ -0.58
CCDC90B-215ENST00000529745 C20orf85Q9H1P6 137 aa11.41□□□□□ -0.58
CCDC90B-215ENST00000529745 IGKV3-7A0A075B6H7 116 aa11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 IGHV3-66A0A0C4DH42 116 aa11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 HELTA6NFD8 242 aa11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 MPTX1A8MV57 137 aa11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 DNASE2O00115 360 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 BUB3O43684 328 aa11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 IFNA21P01568 189 aa11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 TFPI2P48307 235 aa11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 EIF2B2P49770 351 aaKnown RBP11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 AP2S1P53680 142 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 C4orf46Q504U0 113 aa11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 APRG1Q8IVJ8 170 aa11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 GBGT1Q8N5D6 347 aa11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 DCANP1Q8TF63 244 aa11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 TRGV9Q99603 122 aa11.4□□□□□ -0.58
CCDC90B-215ENST00000529745 WRBO00258 174 aa11.39□□□□□ -0.59
CCDC90B-215ENST00000529745 TCRBP04435 133 aa11.39□□□□□ -0.59
CCDC90B-215ENST00000529745 FABP1P07148 127 aa11.39□□□□□ -0.59
CCDC90B-215ENST00000529745 NUP62P37198 522 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-215ENST00000529745 NKX2-1P43699 371 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-215ENST00000529745 STPG3Q8N7X2 389 aa11.39□□□□□ -0.59
CCDC90B-215ENST00000529745 IL17DQ8TAD2 202 aa11.39□□□□□ -0.59
CCDC90B-215ENST00000529745 RNF183Q96D59 192 aa11.39□□□□□ -0.59
CCDC90B-215ENST00000529745 RNF125Q96EQ8 232 aa11.39□□□□□ -0.59
CCDC90B-215ENST00000529745 MAGT1Q9H0U3 335 aa11.39□□□□□ -0.59
CCDC90B-215ENST00000529745 SEPSECSQ9HD40 501 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-215ENST00000529745 RABAC1Q9UI14 185 aa11.39□□□□□ -0.59
CCDC90B-215ENST00000529745 PCLOQ9Y6V0 5065 aa11.38□□□□□ -0.59
CCDC90B-215ENST00000529745 IGKV1OR2-108A0A075B7D4 117 aa11.38□□□□□ -0.59
CCDC90B-215ENST00000529745 ZFP92A6NM28 416 aa11.38□□□□□ -0.59
CCDC90B-215ENST00000529745 CFDP00746 253 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-215ENST00000529745 ZNF124Q15973 351 aa11.38□□□□□ -0.59
CCDC90B-215ENST00000529745 FAM24BQ8N5W8 94 aa11.38□□□□□ -0.59
CCDC90B-215ENST00000529745 SMIM8Q96KF7 97 aa11.38□□□□□ -0.59
CCDC90B-215ENST00000529745 STRAPQ9Y3F4 350 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-215ENST00000529745 PMS2P5A8MQ11 134 aa11.37□□□□□ -0.59
CCDC90B-215ENST00000529745 SPRY2O43597 315 aa11.37□□□□□ -0.59
CCDC90B-215ENST00000529745 ATF4P18848 351 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-215ENST00000529745 TAS2R30P59541 319 aa11.37□□□□□ -0.59
CCDC90B-215ENST00000529745 DEFB131AP59861 70 aa11.37□□□□□ -0.59
CCDC90B-215ENST00000529745 POLR2GP62487 172 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC90B-215ENST00000529745 RPL11P62913 178 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-215ENST00000529745 ZNF90Q03938 601 aa11.37□□□□□ -0.59
CCDC90B-215ENST00000529745 SPANXN5Q5MJ07 72 aa11.37□□□□□ -0.59
CCDC90B-215ENST00000529745 ZBTB8BQ8NAP8 495 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-215ENST00000529745 STXBP6Q8NFX7 210 aa11.37□□□□□ -0.59
CCDC90B-215ENST00000529745 CSTL1Q9H114 145 aa11.37□□□□□ -0.59
CCDC90B-215ENST00000529745 PTTG2Q9NZH5 202 aa11.37□□□□□ -0.59
CCDC90B-215ENST00000529745 PFDN2Q9UHV9 154 aa11.37□□□□□ -0.59
CCDC90B-215ENST00000529745 RPL35AP18077 110 aaKnown RBP11.36□□□□□ -0.59
CCDC90B-215ENST00000529745 PAX9P55771 341 aa11.36□□□□□ -0.59
CCDC90B-215ENST00000529745 IAH1Q2TAA2 248 aaPredicted RBP11.36□□□□□ -0.59
CCDC90B-215ENST00000529745 DEFB135Q30KP9 77 aa11.36□□□□□ -0.59
CCDC90B-215ENST00000529745 C1orf194Q5T5A4 169 aa11.36□□□□□ -0.59
CCDC90B-215ENST00000529745 GATAD1Q8WUU5 269 aa11.36□□□□□ -0.59
CCDC90B-215ENST00000529745 SLC45A2Q9UMX9 530 aa11.36□□□□□ -0.59
CCDC90B-215ENST00000529745 SNRPGP15A8MWD9 76 aa11.35□□□□□ -0.59
CCDC90B-215ENST00000529745 FNDC10F2Z333 226 aa11.35□□□□□ -0.59
CCDC90B-215ENST00000529745 ASAH1Q13510 395 aa11.35□□□□□ -0.59
CCDC90B-215ENST00000529745 TMEM14EPQ6UXP3 125 aa11.35□□□□□ -0.59
CCDC90B-215ENST00000529745 SIGLEC15Q6ZMC9 328 aa11.35□□□□□ -0.59
CCDC90B-215ENST00000529745 TMEM144Q7Z5S9 345 aa11.35□□□□□ -0.59
CCDC90B-215ENST00000529745 ZNF431Q8TF32 576 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-215ENST00000529745 RAB40CQ96S21 281 aa11.35□□□□□ -0.59
CCDC90B-215ENST00000529745 NRN1Q9NPD7 142 aa11.35□□□□□ -0.59
CCDC90B-215ENST00000529745 NUDT15Q9NV35 164 aa11.35□□□□□ -0.59
CCDC90B-215ENST00000529745 PSENENQ9NZ42 101 aa11.35□□□□□ -0.59
CCDC90B-215ENST00000529745 TBC1D24Q9ULP9 559 aa11.35□□□□□ -0.59
CCDC90B-215ENST00000529745 AGRNO00468 2067 aa11.35□□□□□ -0.59
CCDC90B-215ENST00000529745 H3BP45 60 aa11.34□□□□□ -0.59
CCDC90B-215ENST00000529745 TSC22D2O75157 780 aa11.34□□□□□ -0.59
CCDC90B-215ENST00000529745 WDR12Q9GZL7 423 aaKnown RBP11.34□□□□□ -0.59
CCDC90B-215ENST00000529745 FBXL17Q9UF56 701 aa11.34□□□□□ -0.59
CCDC90B-215ENST00000529745 PAIP2BQ9ULR5 123 aaKnown RBP11.34□□□□□ -0.59
CCDC90B-215ENST00000529745 HERC2O95714 4834 aa11.34□□□□□ -0.59
CCDC90B-215ENST00000529745 STARD9Q9P2P6 4700 aa11.33□□□□□ -0.6
CCDC90B-215ENST00000529745 TRAV6A0A075B6T7 132 aa11.33□□□□□ -0.6
CCDC90B-215ENST00000529745 SSSCA1O60232 199 aa11.33□□□□□ -0.6
CCDC90B-215ENST00000529745 H2AFB2P0C5Z0 115 aa11.33□□□□□ -0.6
CCDC90B-215ENST00000529745 ZNF688P0C7X2 276 aa11.33□□□□□ -0.6
CCDC90B-215ENST00000529745 DLK1P80370 383 aa11.33□□□□□ -0.6
CCDC90B-215ENST00000529745 ZNF846Q147U1 533 aa11.33□□□□□ -0.6
CCDC90B-215ENST00000529745 TMEM41BQ5BJD5 291 aa11.33□□□□□ -0.6
CCDC90B-215ENST00000529745 LEMD1Q68G75 181 aa11.33□□□□□ -0.6
CCDC90B-215ENST00000529745 MZT2BQ6NZ67 158 aa11.33□□□□□ -0.6
CCDC90B-215ENST00000529745 ACOT7LQ6ZUV0 252 aa11.33□□□□□ -0.6
CCDC90B-215ENST00000529745 TRPT1Q86TN4 253 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-215ENST00000529745 RCL1Q9Y2P8 373 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-215ENST00000529745 FAM240BA0A1B0GVZ2 78 aa11.32□□□□□ -0.6
CCDC90B-215ENST00000529745 UPK1BO75841 260 aa11.32□□□□□ -0.6
CCDC90B-215ENST00000529745 MBPP02686 304 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms