RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 HIGD2AQ9BW72 106 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 YIPF3Q9GZM5 350 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 COPZ2Q9P299 210 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 SBF1O95248 1867 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 CPAMD8Q8IZJ3 1885 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 CDK5RAP2Q96SN8 1893 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 MYO16Q9Y6X6 1858 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 CCDC88CQ9P219 2028 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 SCN8AQ9UQD0 1980 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 MDFIC2A0A1B0GVS7 189 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 C1orf196B1AJZ1 125 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 TP53I11O14683 189 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 IGKV1-16P04430 117 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 SCTP09683 121 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 P0DMU3 169 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 FAM231AP0DMU4 169 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 FAM231CP0DMU5 169 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 COX4I1P13073 169 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 NFYAP23511 347 aaPredicted RBP2.16□□□□□ -2.06
C11orf88-204ENST00000529661 FKBP2P26885 142 aaKnown RBP2.16□□□□□ -2.06
C11orf88-204ENST00000529661 SDC4P31431 198 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 RNASE4P34096 147 aaKnown RBP2.16□□□□□ -2.06
C11orf88-204ENST00000529661 KISS1Q15726 138 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 HRCT1Q6UXD1 115 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 LRRC28Q86X40 367 aaPredicted RBP2.16□□□□□ -2.06
C11orf88-204ENST00000529661 OR4C16Q8NGL9 310 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 PFN4Q8NHR9 129 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 STAG3L4Q8TBR4 150 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 WFDC5Q8TCV5 224 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 DNAJC9Q8WXX5 260 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 OR8B2Q96RD0 313 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 CGREF1Q99674 301 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 OSTCQ9NRP0 149 aa2.16□□□□□ -2.06
C11orf88-204ENST00000529661 TRGV5A0A0B4J1U4 118 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 RFPL4AA6NLU0 287 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 RFPL4AL1F8VTS6 287 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 TMEM256-PLSCR3K7ERE1 68 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 SLC22A1O15245 554 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 MPC1LP0DKB6 136 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 UBE2BP63146 152 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 C22orf39Q6P5X5 142 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 OR8I2Q8N0Y5 310 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 LRRC18Q8N456 261 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 SIGLECL1Q8N7X8 197 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 Q8NDZ9 215 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 PPTC7Q8NI37 304 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 RNASE11Q8TAA1 199 aaKnown RBP2.15□□□□□ -2.07
C11orf88-204ENST00000529661 IMMP2LQ96T52 175 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 ZNF471Q9BX82 626 aaPredicted RBP2.15□□□□□ -2.07
C11orf88-204ENST00000529661 OR2H1Q9GZK4 316 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 OTORQ9NRC9 128 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 HSPB8Q9UJY1 196 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 TRAPPC2LQ9UL33 140 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 EPDR1Q9UM22 224 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 TRPM1Q7Z4N2 1603 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 OVOS2A0A0G2JMS6 1433 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 SOGA1O94964 1423 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 TRAPPC8Q9Y2L5 1435 aa2.15□□□□□ -2.07
C11orf88-204ENST00000529661 SPEF2Q9C093 1822 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 RFX7Q2KHR2 1363 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 TRGV10A0A0A0MS01 117 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 TRAV5A0A0B4J249 113 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 C3orf84H3BNL1 204 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 H3BT86 120 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 GABARAPH6UMI1 98 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 K7EP13 123 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 GNRH2O43555 120 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 OR2T1O43869 369 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 SULT1C4O75897 302 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 TCL1BO95988 128 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 C1QCP02747 245 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 FUSP35637 526 aaKnown RBP eCLIP2.14□□□□□ -2.07
C11orf88-204ENST00000529661 RPL28P46779 137 aaKnown RBP2.14□□□□□ -2.07
C11orf88-204ENST00000529661 FOXF1Q12946 379 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 LYZL1Q6UWQ5 148 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 PHF5AQ7RTV0 110 aaKnown RBP2.14□□□□□ -2.07
C11orf88-204ENST00000529661 BPIFA4PQ86YQ2 179 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 FGF13Q92913 245 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 HIST1H2BLQ99880 126 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 MRPL32Q9BYC8 188 aaKnown RBP2.14□□□□□ -2.07
C11orf88-204ENST00000529661 POPDC3Q9HBV1 291 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 NAT8Q9UHE5 227 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 MYH7P12883 1935 aa2.14□□□□□ -2.07
C11orf88-204ENST00000529661 ARHGEF11O15085 1522 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 ZFC3H1O60293 1989 aaKnown RBP2.13□□□□□ -2.07
C11orf88-204ENST00000529661 TRAV7A0A075B6U4 112 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 TRBV7-6A0A0J9YX20 115 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 C11orf86A6NJI1 115 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 C9JAW5 83 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 E7EQL1 145 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 CST7O76096 145 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 TNFSF15O95150 251 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 OR2H2O95918 312 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 UBBP0CG47 229 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 DYNLT3P51808 116 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 SLC38A11Q08AI6 406 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 PABPC1L2AQ5JQF8 200 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 MSRB3Q8IXL7 192 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 IFT20Q8IY31 132 aa2.13□□□□□ -2.07
C11orf88-204ENST00000529661 OR2T10Q8NGZ9 312 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms