RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 SCRT2Q9NQ03 307 aa11.48□□□□□ -0.57
USP48-213ENST00000529637 AKAP13Q12802 2813 aa11.48□□□□□ -0.57
USP48-213ENST00000529637 ADGRG4Q8IZF6 3080 aa11.48□□□□□ -0.57
USP48-213ENST00000529637 DMXL2Q8TDJ6 3036 aa11.48□□□□□ -0.57
USP48-213ENST00000529637 LEPROTL1O95214 131 aa11.48□□□□□ -0.57
USP48-213ENST00000529637 IGKV1-16P04430 117 aa11.48□□□□□ -0.57
USP48-213ENST00000529637 ZNF137PP52743 207 aa11.48□□□□□ -0.57
USP48-213ENST00000529637 SSBP2P81877 361 aaPredicted RBP11.48□□□□□ -0.57
USP48-213ENST00000529637 LINC00322Q6ZN03 302 aaPredicted RBP11.48□□□□□ -0.57
USP48-213ENST00000529637 CORO2AQ92828 525 aa11.48□□□□□ -0.57
USP48-213ENST00000529637 GRAMD2BQ96HH9 432 aa11.48□□□□□ -0.57
USP48-213ENST00000529637 TMEM14BQ9NUH8 114 aa11.48□□□□□ -0.57
USP48-213ENST00000529637 IDI2-AS1Q9NZ38 188 aa11.48□□□□□ -0.57
USP48-213ENST00000529637 K7EM74 188 aa11.47□□□□□ -0.57
USP48-213ENST00000529637 KLK10O43240 276 aa11.47□□□□□ -0.57
USP48-213ENST00000529637 IGHV3-48P01763 117 aa11.47□□□□□ -0.57
USP48-213ENST00000529637 C8orf88P0DMB2 117 aa11.47□□□□□ -0.57
USP48-213ENST00000529637 CFHR2P36980 270 aa11.47□□□□□ -0.57
USP48-213ENST00000529637 RTL8BQ17RB0 113 aa11.47□□□□□ -0.57
USP48-213ENST00000529637 DDB2Q92466 427 aa11.47□□□□□ -0.57
USP48-213ENST00000529637 H1FXQ92522 213 aaKnown RBP11.47□□□□□ -0.57
USP48-213ENST00000529637 ABCA4P78363 2273 aa11.47□□□□□ -0.57
USP48-213ENST00000529637 TOX4O94842 621 aa11.47□□□□□ -0.57
USP48-213ENST00000529637 NAV3Q8IVL0 2385 aa11.47□□□□□ -0.57
USP48-213ENST00000529637 ZNF292O60281 2723 aa11.47□□□□□ -0.57
USP48-213ENST00000529637 PPIAL4DF5H284 164 aa11.47□□□□□ -0.57
USP48-213ENST00000529637 RASL11AQ6T310 242 aa11.47□□□□□ -0.57
USP48-213ENST00000529637 FNDC4Q9H6D8 234 aaPredicted RBP11.47□□□□□ -0.57
USP48-213ENST00000529637 RPH3ALQ9UNE2 315 aa11.47□□□□□ -0.57
USP48-213ENST00000529637 A0A1B0GXF2 115 aa11.46□□□□□ -0.57
USP48-213ENST00000529637 K7ERU9 68 aa11.46□□□□□ -0.57
USP48-213ENST00000529637 PLAUP00749 431 aa11.46□□□□□ -0.57
USP48-213ENST00000529637 LHBP01229 141 aa11.46□□□□□ -0.57
USP48-213ENST00000529637 RPS20P60866 119 aaKnown RBP11.46□□□□□ -0.57
USP48-213ENST00000529637 FAM71F2Q6NXP2 309 aa11.46□□□□□ -0.57
USP48-213ENST00000529637 C12orf54Q6X4T0 127 aa11.46□□□□□ -0.57
USP48-213ENST00000529637 IGLC1P0CG04 106 aa11.46□□□□□ -0.58
USP48-213ENST00000529637 CD40P25942 277 aa11.46□□□□□ -0.58
USP48-213ENST00000529637 CLEC2AQ6UVW9 174 aa11.46□□□□□ -0.58
USP48-213ENST00000529637 FAM169BQ8N8A8 192 aa11.46□□□□□ -0.58
USP48-213ENST00000529637 OR10W1Q8NGF6 305 aa11.46□□□□□ -0.58
USP48-213ENST00000529637 ADTRPQ96IZ2 230 aa11.46□□□□□ -0.58
USP48-213ENST00000529637 GAFA1Q96PS6 74 aa11.46□□□□□ -0.58
USP48-213ENST00000529637 C7orf71A4D174 169 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 CD5LO43866 347 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 UQCRFS1P47985 274 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 TCTAP57738 103 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 FOXA2Q9Y261 457 aaPredicted RBP11.45□□□□□ -0.58
USP48-213ENST00000529637 FAM231BA6NCW3 169 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 CCL3L1P16619 93 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 TAS2R45P59539 299 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 FAM231DQ6ZW35 169 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 ZNF329Q86UD4 541 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 GTSF1Q8WW33 167 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 C7orf69Q9H7B7 122 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 PRNDQ9UKY0 176 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 TLN1Q9Y490 2541 aaKnown RBP11.45□□□□□ -0.58
USP48-213ENST00000529637 PEX7O00628 323 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 C2orf91Q6ZV80 131 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 CCL17Q92583 94 aa11.45□□□□□ -0.58
USP48-213ENST00000529637 hADV38S2A0JD32 116 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 SRRM4A7MD48 611 aaKnown RBP11.44□□□□□ -0.58
USP48-213ENST00000529637 CGB3P0DN86 165 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 CGB7P0DN87 165 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 TMEM11P17152 192 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 CR1LQ2VPA4 569 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 PGLYRP4Q96LB8 373 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 MUC6Q6W4X9 2439 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 IGLV3-9A0A075B6K5 115 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 PSMB11A5LHX3 300 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 CSN3P07498 182 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 GPR183P32249 361 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 TEX45Q8NA69 505 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 HARBI1Q96MB7 349 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 CHRDL1Q9BU40 450 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 ATMQ13315 3056 aa11.44□□□□□ -0.58
USP48-213ENST00000529637 HSBP1L1C9JCN9 74 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 CT45A6P0DMU7 189 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 CT45A5P0DMU8 189 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 CT45A7P0DMV0 189 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 TMEM108Q6UXF1 575 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 OR1B1Q8NGR6 318 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 JMJD8Q96S16 334 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 KALRNO60229 2985 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 GOSR1O95249 250 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 APOA2P02652 100 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 SAA1P0DJI8 122 aaPredicted RBP11.43□□□□□ -0.58
USP48-213ENST00000529637 Q71RC1 249 aaPredicted RBP11.43□□□□□ -0.58
USP48-213ENST00000529637 FER1L6-AS1Q8NA97 138 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.43□□□□□ -0.58
USP48-213ENST00000529637 MRPL20Q9BYC9 149 aaKnown RBP11.43□□□□□ -0.58
USP48-213ENST00000529637 TMEM191AQ9H0A3 160 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 RPUSD1Q9UJJ7 312 aaKnown RBP11.43□□□□□ -0.58
USP48-213ENST00000529637 GAGE10A6NGK3 116 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 HBBP68871 147 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 OR10X1Q8NGY0 326 aa11.43□□□□□ -0.58
USP48-213ENST00000529637 PEF1Q9UBV8 284 aaKnown RBP11.43□□□□□ -0.58
USP48-213ENST00000529637 CUL9Q8IWT3 2517 aa11.42□□□□□ -0.58
USP48-213ENST00000529637 UPK2O00526 184 aa11.42□□□□□ -0.58
USP48-213ENST00000529637 ZNF788Q6ZQV5 615 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms