RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 RNASE11Q8TAA1 199 aaKnown RBP6.35□□□□□ -1.39
VPS11-203ENST00000529545 FCGR1BQ92637 280 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 PPP1R14BQ96C90 147 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 LINC00052Q96N35 136 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 TMEM208Q9BTX3 173 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 MAGT1Q9H0U3 335 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 ANAPC10Q9UM13 185 aa6.35□□□□□ -1.39
VPS11-203ENST00000529545 A0A0B4J293 547 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 EPM2AB3EWF7 344 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 BUB3O43684 328 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 HLA-DMAP28067 261 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 HTR2BP41595 481 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 ALDH3B2P48448 385 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 RND2P52198 227 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 UCP3P55916 312 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 GABARAPL2P60520 117 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 PSG9Q00887 426 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 EBLN2Q6P2I7 272 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 ZNRF2Q8NHG8 242 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 RRNAD1Q96FB5 475 aaKnown RBP6.34□□□□□ -1.39
VPS11-203ENST00000529545 CLUHP3Q96NS8 147 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 SAV1Q9H4B6 383 aaPredicted RBP6.34□□□□□ -1.39
VPS11-203ENST00000529545 SCPEP1Q9HB40 452 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 PTTG2Q9NZH5 202 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 RAB26Q9ULW5 256 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 HERC1Q15751 4861 aa6.34□□□□□ -1.39
VPS11-203ENST00000529545 LOC100506127A0A0U1RQW1 187 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 M0QYG6 137 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 NUDT3O95989 172 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 IGLC1P0CG04 106 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 RD3LP0DJH9 198 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 PGAM2P15259 253 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 PSMB3P49720 205 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 CLINT1Q14677 625 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 USF2Q15853 346 aaPredicted RBP6.33□□□□□ -1.4
VPS11-203ENST00000529545 UBE2NLQ5JXB2 153 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 GDF5OSQ5U4N7 250 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 ETFRF1Q6IPR1 90 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 PRSS54Q6PEW0 395 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 LYSMD2Q8IV50 215 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 CROCCP3Q8IVE0 287 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 RNASEH2CQ8TDP1 164 aaKnown RBP6.33□□□□□ -1.4
VPS11-203ENST00000529545 SLC35B3Q9H1N7 401 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 HEYLQ9NQ87 328 aaPredicted RBP6.33□□□□□ -1.4
VPS11-203ENST00000529545 KLK11Q9UBX7 282 aa6.33□□□□□ -1.4
VPS11-203ENST00000529545 APOBP04114 4563 aaKnown RBP6.32□□□□□ -1.4
VPS11-203ENST00000529545 LYRM9A8MSI8 78 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 F5H768 121 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 TOMM40O96008 361 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 IGKV1-5P01602 117 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 INAFM2P0DMQ5 153 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 RCVRNP35243 200 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 RORCP51449 518 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 SPCS3P61009 180 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 RND3P61587 244 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 TRIM16LQ309B1 348 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 BSXQ3C1V8 233 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 TTC32Q5I0X7 151 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 NOXA1Q86UR1 476 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 SPARTQ8N0X7 666 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 C1orf158Q8N1D5 194 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 ZNF709Q8N972 641 aa6.32□□□□□ -1.4
VPS11-203ENST00000529545 ZNF486Q96H40 463 aaPredicted RBP6.32□□□□□ -1.4
VPS11-203ENST00000529545 C3orf85A0A1B0GTC6 90 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 P0C879 139 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 DEFB130BP0DP73 79 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 DEFB130AP0DP74 79 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 PIGPP57054 158 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 DEFB1P60022 68 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 ZNF79Q15937 498 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 C2orf83Q53S99 150 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 LCE1DQ5T752 114 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 FAM78BQ5VT40 261 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 SAMD13Q5VXD3 122 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 SAMD12Q8N8I0 201 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 OR51G1Q8NGK1 321 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 NPIPB3Q92617 1050 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 RNF125Q96EQ8 232 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 ACY3Q96HD9 319 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 ABHD1Q96SE0 405 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 PBDC1Q9BVG4 233 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 MRPS26Q9BYN8 205 aaKnown RBP6.31□□□□□ -1.4
VPS11-203ENST00000529545 RPRMQ9NS64 109 aa6.31□□□□□ -1.4
VPS11-203ENST00000529545 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.31□□□□□ -1.4
VPS11-203ENST00000529545 DMBT1Q9UGM3 2413 aaPredicted RBP6.31□□□□□ -1.4
VPS11-203ENST00000529545 DNAH5Q8TE73 4624 aa6.3□□□□□ -1.4
VPS11-203ENST00000529545 CEBPZOSA8MTT3 80 aa6.3□□□□□ -1.4
VPS11-203ENST00000529545 ISLRO14498 428 aa6.3□□□□□ -1.4
VPS11-203ENST00000529545 ATP5G1P05496 136 aa6.3□□□□□ -1.4
VPS11-203ENST00000529545 PSG1P11464 419 aa6.3□□□□□ -1.4
VPS11-203ENST00000529545 PI3P19957 117 aa6.3□□□□□ -1.4
VPS11-203ENST00000529545 ATP5G3P48201 142 aa6.3□□□□□ -1.4
VPS11-203ENST00000529545 PAX9P55771 341 aa6.3□□□□□ -1.4
VPS11-203ENST00000529545 B2MP61769 119 aa6.3□□□□□ -1.4
VPS11-203ENST00000529545 OR8G2PQ6IF36 304 aa6.3□□□□□ -1.4
VPS11-203ENST00000529545 SSX7Q7RTT5 188 aa6.3□□□□□ -1.4
VPS11-203ENST00000529545 CCDC71LQ8N9Z2 235 aa6.3□□□□□ -1.4
VPS11-203ENST00000529545 SLC24A4Q8NFF2 622 aa6.3□□□□□ -1.4
VPS11-203ENST00000529545 OR4C16Q8NGL9 310 aa6.3□□□□□ -1.4
VPS11-203ENST00000529545 OR52E5Q8NH55 327 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms