RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 NHLH2Q02577 135 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 CLINT1Q14677 625 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 C9orf66Q5T8R8 295 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 LAMTOR1Q6IAA8 161 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 BTNL8Q6UX41 500 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 TREML4Q6UXN2 200 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 CYP2G1PQ6ZSU1 146 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 KCNRGQ8N5I3 272 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 STPG3Q8N7X2 389 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 OR9G4Q8NGQ1 327 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 TMEM170AQ8WVE7 144 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 TMEM190Q8WZ59 177 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 RNF125Q96EQ8 232 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 RAX2Q96IS3 184 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 ST6GAL2Q96JF0 529 aa6.11□□□□□ -1.43
SSBP3-211ENST00000528787 PSMG3Q9BT73 122 aaPredicted RBP6.11□□□□□ -1.43
SSBP3-211ENST00000528787 IGHV3-21A0A0B4J1V1 117 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 HELTA6NFD8 242 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 AGPAT2O15120 278 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 HYPMO75409 117 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 TSPAN15O95858 294 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 IGHV3-23P01764 117 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 HNRNPCP07910 306 aaKnown RBP eCLIP6.1□□□□□ -1.43
SSBP3-211ENST00000528787 TPT1P13693 172 aaKnown RBP6.1□□□□□ -1.43
SSBP3-211ENST00000528787 PLP1P60201 277 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 PAFAH1B2P68402 229 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 C1orf194Q5T5A4 169 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 STXBP6Q8NFX7 210 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 DYNLRB2Q8TF09 96 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 GATAD1Q8WUU5 269 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 TAF15Q92804 592 aaKnown RBP eCLIP6.1□□□□□ -1.432e-6■■■■□ 24
SSBP3-211ENST00000528787 MDFIQ99750 246 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 C20orf24Q9BUV8 137 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 NPCDR1Q9BY65 106 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 WDR61Q9GZS3 305 aaKnown RBP6.1□□□□□ -1.43
SSBP3-211ENST00000528787 ARL6Q9H0F7 186 aa6.1□□□□□ -1.43
SSBP3-211ENST00000528787 LSM4Q9Y4Z0 139 aaKnown RBP6.1□□□□□ -1.43
SSBP3-211ENST00000528787 PUS1Q9Y606 427 aaKnown RBP eCLIP6.1□□□□□ -1.43
SSBP3-211ENST00000528787 TRAV25A0A0B4J276 109 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 ADARB2-AS1A8MUL3 147 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 UMAD1C9J7I0 102 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 PPP5D1E7EU14 171 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 TEX46H3BTG2 121 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 BCL2L11O43521 198 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 COX7A2P2O60397 106 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 IGKV1-17P01599 117 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 IL4P05112 153 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 LINC00869P0C866 280 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 PSG1P11464 419 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 SYNJ2BPP57105 145 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 TAS2R45P59539 299 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 B2MP61769 119 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 ACOT6Q3I5F7 207 aaPredicted RBP6.09□□□□□ -1.43
SSBP3-211ENST00000528787 TIGITQ495A1 244 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 LCN12Q6JVE5 192 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 C19orf35Q6ZS72 473 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 LINC00482Q8N8I6 264 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 WFDC9Q8NEX5 89 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 NEURL2Q9BR09 285 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 MRPL32Q9BYC8 188 aaKnown RBP6.09□□□□□ -1.43
SSBP3-211ENST00000528787 HIGD1AQ9Y241 93 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 WNK1Q9H4A3 2382 aa6.09□□□□□ -1.43
SSBP3-211ENST00000528787 A0A1W2PPV4 95 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 WI2-2373I1.2A0A1W2PRP0 233 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 RNF222A6NCQ9 220 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 SEC14L6B5MCN3 397 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 F8W735 103 aaPredicted RBP6.08□□□□□ -1.44
SSBP3-211ENST00000528787 IGHV3-48P01763 117 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 OR5G3P0C626 314 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 RPL7P18124 248 aaKnown RBP6.08□□□□□ -1.44
SSBP3-211ENST00000528787 ADMP35318 185 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 RAB5CP51148 216 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 KRTAP10-3P60369 221 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 LYZP61626 148 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 RHOBP62745 196 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 OPCMLQ14982 345 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 MLANAQ16655 118 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 DEFB136Q30KP8 78 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 C10orf113Q5VZT2 155 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 TOMM20LQ6UXN7 152 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 DPPA3Q6W0C5 159 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 RBPMS2Q6ZRY4 209 aaKnown RBP6.08□□□□□ -1.44
SSBP3-211ENST00000528787 TMUB2Q71RG4 321 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 SLC51BQ86UW2 128 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 DLX4Q92988 240 aaPredicted RBP6.08□□□□□ -1.44
SSBP3-211ENST00000528787 CHRDL1Q9BU40 450 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 PBDC1Q9BVG4 233 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 ZNF471Q9BX82 626 aaPredicted RBP6.08□□□□□ -1.44
SSBP3-211ENST00000528787 SMIM3Q9BZL3 60 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 DNAJC4Q9NNZ3 241 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 SLC39A9Q9NUM3 307 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 CLEC5AQ9NY25 188 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 S4R3C0 116 aa6.08□□□□□ -1.44
SSBP3-211ENST00000528787 TRAV2A0A0B4J234 112 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 IGHV7-4-1A0A0J9YVY3 117 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 C2orf70A6NJV1 201 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 SAP30O75446 220 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 SEC11BP0C7V7 166 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 C8orf88P0DMB2 117 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 FOLR2P14207 255 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms