RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 LCN6P62502 163 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 RHEBQ15382 184 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 PCOTHQ58A44 107 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 LCN15Q6UWW0 184 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 Q6ZRN7 208 aaPredicted RBP1.36□□□□□ -2.19
BRCA2-203ENST00000528762 ZNF826PQ6ZT77 177 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 ALPK2Q86TB3 2170 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 COA5Q86WW8 74 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 OR4D11Q8NGI4 311 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 OR8D4Q8NGM9 314 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 PLEKHB2Q96CS7 222 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 PBOV1Q9GZY1 135 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 TMEM126AQ9H061 195 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 EPDR1Q9UM22 224 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 RIMBP3CA6NJZ7 1639 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 RIMBP3BA6NNM3 1639 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 RIMBP3Q9UFD9 1639 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 NUP98P52948 1817 aa1.36□□□□□ -2.19
BRCA2-203ENST00000528762 COL4A5P29400 1685 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 TONSLQ96HA7 1378 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 RGS12O14924 1447 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 UHRF1BP1Q6BDS2 1440 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 SETD5Q9C0A6 1442 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 F8W036 122 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 AIPO00170 330 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 GPR31O00270 319 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 TAX1BP3O14907 124 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 BANF1O75531 89 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 CRPP02741 224 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 NBEAP1P0C6P0 100 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 FKBP2P26885 142 aaKnown RBP1.35□□□□□ -2.19
BRCA2-203ENST00000528762 TCTAP57738 103 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 TFAMQ00059 246 aaKnown RBP1.35□□□□□ -2.19
BRCA2-203ENST00000528762 TSNQ15631 228 aaKnown RBP1.35□□□□□ -2.19
BRCA2-203ENST00000528762 SPANXN5Q5MJ07 72 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 STX19Q8N4C7 294 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 LINC00471Q8N535 108 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 NUP35Q8NFH5 326 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 CARD19Q96LW7 228 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 INTS1Q8N201 2190 aaKnown RBP1.35□□□□□ -2.19
BRCA2-203ENST00000528762 FBN1P35555 2871 aaKnown RBP1.35□□□□□ -2.19
BRCA2-203ENST00000528762 PIK3C2AO00443 1686 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 SORL1Q92673 2214 aa1.35□□□□□ -2.19
BRCA2-203ENST00000528762 ZCCHC11Q5TAX3 1644 aaKnown RBP1.34□□□□□ -2.19
BRCA2-203ENST00000528762 SRP14P37108 136 aaKnown RBP1.34□□□□□ -2.19
BRCA2-203ENST00000528762 INSL3P51460 131 aa1.34□□□□□ -2.19
BRCA2-203ENST00000528762 KRTAP12-3P60328 96 aa1.34□□□□□ -2.19
BRCA2-203ENST00000528762 EIF5AP63241 154 aaKnown RBP1.34□□□□□ -2.19
BRCA2-203ENST00000528762 LTC4SQ16873 150 aa1.34□□□□□ -2.19
BRCA2-203ENST00000528762 TAC4Q86UU9 113 aa1.34□□□□□ -2.19
BRCA2-203ENST00000528762 RPS19BP1Q86WX3 136 aaKnown RBP1.34□□□□□ -2.19
BRCA2-203ENST00000528762 PHF13Q86YI8 300 aaPredicted RBP1.34□□□□□ -2.19
BRCA2-203ENST00000528762 AQP3Q92482 292 aa1.34□□□□□ -2.19
BRCA2-203ENST00000528762 ZHX1-C8orf76Q96EF9 292 aa1.34□□□□□ -2.19
BRCA2-203ENST00000528762 MRPL40Q9NQ50 206 aaKnown RBP1.34□□□□□ -2.19
BRCA2-203ENST00000528762 NHP2Q9NX24 153 aaKnown RBP1.34□□□□□ -2.19
BRCA2-203ENST00000528762 SSR3Q9UNL2 185 aa1.34□□□□□ -2.19
BRCA2-203ENST00000528762 N4BP2Q86UW6 1770 aaPredicted RBP1.34□□□□□ -2.2
BRCA2-203ENST00000528762 SCN3AQ9NY46 2000 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 MYOFQ9NZM1 2061 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 YTHDC2Q9H6S0 1430 aaKnown RBP1.33□□□□□ -2.2
BRCA2-203ENST00000528762 MYLKQ15746 1914 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 CAMSAP2Q08AD1 1489 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 TRGV2A0A075B6R0 118 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 TRAV1-1A0A0B4J248 108 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 A0A1B0GV72 72 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 DUXBA0A1W2PPF3 345 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 A0A1W2PRE2 83 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 C7orf71A4D174 169 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 J3QKU1 62 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 CST8O60676 142 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 GGCTO75223 188 aaKnown RBP1.33□□□□□ -2.2
BRCA2-203ENST00000528762 UBBP0CG47 229 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 KRTAP12-1P59990 96 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 SNCBQ16143 134 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 Q1T7F1 81 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 SCGB2B2Q4G0G5 96 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 BCL2L15Q5TBC7 163 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 FP248Q71RG6 208 aaPredicted RBP1.33□□□□□ -2.2
BRCA2-203ENST00000528762 OR13D1Q8NGV5 346 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 OR10K1Q8NGX5 313 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 OR2T10Q8NGZ9 312 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 MALSU1Q96EH3 234 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 ZNF625Q96I27 306 aaPredicted RBP1.33□□□□□ -2.2
BRCA2-203ENST00000528762 YPEL2Q96QA6 119 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 GPX7Q96SL4 187 aaPredicted RBP1.33□□□□□ -2.2
BRCA2-203ENST00000528762 SLC50A1Q9BRV3 221 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 TMEM70Q9BUB7 260 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 PBDC1Q9BVG4 233 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 TAS2R4Q9NYW5 299 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 PCTPQ9UKL6 214 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 NDUFAF1Q9Y375 327 aa1.33□□□□□ -2.2
BRCA2-203ENST00000528762 MAP1LC3B2A6NCE7 125 aa1.32□□□□□ -2.2
BRCA2-203ENST00000528762 RIIAD1A6NNX1 92 aa1.32□□□□□ -2.2
BRCA2-203ENST00000528762 OR2T1O43869 369 aa1.32□□□□□ -2.2
BRCA2-203ENST00000528762 IFNA21P01568 189 aa1.32□□□□□ -2.2
BRCA2-203ENST00000528762 ZNF846Q147U1 533 aa1.32□□□□□ -2.2
BRCA2-203ENST00000528762 DCUN1D2Q6PH85 259 aa1.32□□□□□ -2.2
BRCA2-203ENST00000528762 SMIM15Q7Z3B0 74 aa1.32□□□□□ -2.2
BRCA2-203ENST00000528762 OR10J5Q8NHC4 309 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms