RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 LRP11Q86VZ4 500 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 SLC30A7Q8NEW0 376 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 OR13C8Q8NGS7 320 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 STAG3L4Q8TBR4 150 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 MS4A6EQ96DS6 147 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 ADAT3Q96EY9 351 aaPredicted RBP3.75□□□□□ -1.81
PCF11-202ENST00000528336 ZNF382Q96SR6 550 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 NRTNQ99748 197 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 CHAC1Q9BUX1 264 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 MED28Q9H204 178 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 VCXQ9H320 206 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 CA10Q9NS85 328 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 ZNF706Q9Y5V0 76 aaPredicted RBP3.75□□□□□ -1.81
PCF11-202ENST00000528336 RP1P56715 2156 aa3.75□□□□□ -1.81
PCF11-202ENST00000528336 ZFC3H1O60293 1989 aaKnown RBP3.74□□□□□ -1.81
PCF11-202ENST00000528336 A0A087WUU8 490 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 IGHV5-51A0A0C4DH38 117 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 A0A0J9YY10 115 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 C9JQL5 133 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 TXNDC9O14530 226 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 RTL8CO15255 209 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 GABARAPO95166 117 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 IGF2P01344 180 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 LTAP01374 205 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 CRISP2P16562 243 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 PPIBP23284 216 aaKnown RBP3.74□□□□□ -1.81
PCF11-202ENST00000528336 CMPK1P30085 196 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 PEBP1P30086 187 aaKnown RBP3.74□□□□□ -1.81
PCF11-202ENST00000528336 DEFA1P59665 94 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 RELAQ04206 551 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 GRK1Q15835 563 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 RNF165Q6ZSG1 346 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 ZNF433Q8N7K0 673 aaPredicted RBP3.74□□□□□ -1.81
PCF11-202ENST00000528336 C20orf203Q8NBC4 194 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 FAM57AQ8TBR7 257 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 ZNF721Q8TF20 911 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 RTN4IP1Q8WWV3 396 aaPredicted RBP3.74□□□□□ -1.81
PCF11-202ENST00000528336 IGF2BP2-AS1Q96M15 143 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 OR2A5Q96R48 311 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 NMNAT3Q96T66 252 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 MRPL57Q9BQC6 102 aaKnown RBP3.74□□□□□ -1.81
PCF11-202ENST00000528336 TBL1XR1Q9BZK7 514 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 ZNF492Q9P255 531 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 CHD8Q9HCK8 2581 aa3.74□□□□□ -1.81
PCF11-202ENST00000528336 UNC13CQ8NB66 2214 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 MEIKINA0A087WXM9 373 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 RIIAD1A6NNX1 92 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 OPN1SWP03999 348 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 SCTP09683 121 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 CCL4P13236 92 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 ELF3P78545 371 aaPredicted RBP3.73□□□□□ -1.81
PCF11-202ENST00000528336 TNFAIP8L3Q5GJ75 292 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 EBLN2Q6P2I7 272 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 Q6Q795 121 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 CAMK2N1Q7Z7J9 78 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 ZNF283Q8N7M2 679 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 SLC25A29Q8N8R3 303 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 ACOT12Q8WYK0 555 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 SLC7A6Q92536 515 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 GNPNAT1Q96EK6 184 aaPredicted RBP3.73□□□□□ -1.81
PCF11-202ENST00000528336 C14orf144Q96I85 54 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 ABHD14BQ96IU4 210 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 CCL13Q99616 98 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 GGTLC1Q9BX51 225 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 COMMD5Q9GZQ3 224 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 SND1-IT1Q9HBX3 110 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 MED11Q9P086 117 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 LAMTOR3Q9UHA4 124 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 TAC3Q9UHF0 121 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 U3KQ87 197 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 IGF2RP11717 2491 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 FREM2Q5SZK8 3169 aa3.73□□□□□ -1.81
PCF11-202ENST00000528336 ACACBO00763 2458 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 AHCTF1Q8WYP5 2266 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 UQCRHLA0A096LP55 91 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 IGHV1-45A0A0A0MS14 117 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 IGHV3-72A0A0B4J1Y9 119 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 NKX2-6A6NCS4 301 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 LST1O00453 97 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 IFNA7P01567 189 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 UQCRHP07919 91 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 NPY1RP25929 384 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 PPP1CCP36873 323 aaKnown RBP3.72□□□□□ -1.81
PCF11-202ENST00000528336 EVX1P49640 407 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 PLCXD2Q0VAA5 305 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 RHEBQ15382 184 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 C4orf33Q8N1A6 199 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 SLC22A24Q8N4F4 322 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 ZNF645Q8N7E2 425 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 IP6K3Q96PC2 410 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 ERMAPQ96PL5 475 aaPredicted RBP3.72□□□□□ -1.81
PCF11-202ENST00000528336 FAM60AQ9NP50 221 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 HMG20AQ9NP66 347 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 KCNIP2Q9NS61 270 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 AK3Q9UIJ7 227 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 RBM7Q9Y580 266 aaKnown RBP3.72□□□□□ -1.81
PCF11-202ENST00000528336 COL27A1Q8IZC6 1860 aaPredicted RBP3.72□□□□□ -1.81
PCF11-202ENST00000528336 APC2O95996 2303 aa3.72□□□□□ -1.81
PCF11-202ENST00000528336 TPRP12270 2363 aaKnown RBP3.71□□□□□ -1.81
PCF11-202ENST00000528336 AKAP13Q12802 2813 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms