RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 DHRS2Q13268 280 aa11.45□□□□□ -0.58
CAPN1-213ENST00000527897 SPANXN5Q5MJ07 72 aa11.45□□□□□ -0.58
CAPN1-213ENST00000527897 STHQ8IWL8 128 aa11.45□□□□□ -0.58
CAPN1-213ENST00000527897 RNF183Q96D59 192 aa11.45□□□□□ -0.58
CAPN1-213ENST00000527897 CIB3Q96Q77 187 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-213ENST00000527897 TP53TG1Q9Y2A0 90 aa11.45□□□□□ -0.58
CAPN1-213ENST00000527897 TRAV2A0A0B4J234 112 aa11.44□□□□□ -0.58
CAPN1-213ENST00000527897 HELTA6NFD8 242 aa11.44□□□□□ -0.58
CAPN1-213ENST00000527897 K7EQG2 157 aa11.44□□□□□ -0.58
CAPN1-213ENST00000527897 CA1P00915 261 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-213ENST00000527897 IFNA21P01568 189 aa11.44□□□□□ -0.58
CAPN1-213ENST00000527897 BTCP35070 178 aa11.44□□□□□ -0.58
CAPN1-213ENST00000527897 ZNF90Q03938 601 aa11.44□□□□□ -0.58
CAPN1-213ENST00000527897 OR2F1Q13607 317 aa11.44□□□□□ -0.58
CAPN1-213ENST00000527897 PMS2P11Q13670 270 aa11.44□□□□□ -0.58
CAPN1-213ENST00000527897 C16orf54Q6UWD8 224 aa11.44□□□□□ -0.58
CAPN1-213ENST00000527897 LYG2Q86SG7 212 aa11.44□□□□□ -0.58
CAPN1-213ENST00000527897 RNF125Q96EQ8 232 aa11.44□□□□□ -0.58
CAPN1-213ENST00000527897 C7orf50Q9BRJ6 194 aaKnown RBP11.44□□□□□ -0.58
CAPN1-213ENST00000527897 U3KQE9 123 aa11.44□□□□□ -0.58
CAPN1-213ENST00000527897 SACSQ9NZJ4 4579 aa11.43□□□□□ -0.58
CAPN1-213ENST00000527897 LYZP61626 148 aa11.43□□□□□ -0.58
CAPN1-213ENST00000527897 GLMPQ8WWB7 406 aa11.43□□□□□ -0.58
CAPN1-213ENST00000527897 AGRNO00468 2067 aa11.43□□□□□ -0.58
CAPN1-213ENST00000527897 IGKV1D-37A0A075B6S9 117 aa11.42□□□□□ -0.58
CAPN1-213ENST00000527897 CXorf65A6NEN9 183 aa11.42□□□□□ -0.58
CAPN1-213ENST00000527897 KNCNA6PVL3 124 aa11.42□□□□□ -0.58
CAPN1-213ENST00000527897 SCGB1D2O95969 90 aa11.42□□□□□ -0.58
CAPN1-213ENST00000527897 FABP1P07148 127 aa11.42□□□□□ -0.58
CAPN1-213ENST00000527897 AP2S1P53680 142 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-213ENST00000527897 POLR2GP62487 172 aaKnown RBP eCLIP11.42□□□□□ -0.58
CAPN1-213ENST00000527897 SIGLEC15Q6ZMC9 328 aa11.42□□□□□ -0.58
CAPN1-213ENST00000527897 DCANP1Q8TF63 244 aa11.42□□□□□ -0.58
CAPN1-213ENST00000527897 PPP1R14BQ96C90 147 aa11.42□□□□□ -0.58
CAPN1-213ENST00000527897 STRAPQ9Y3F4 350 aaKnown RBP11.42□□□□□ -0.58
CAPN1-213ENST00000527897 LYSTQ99698 3801 aa11.42□□□□□ -0.58
CAPN1-213ENST00000527897 LCE6AA0A183 80 aa11.41□□□□□ -0.58
CAPN1-213ENST00000527897 LYRM1O43325 122 aa11.41□□□□□ -0.58
CAPN1-213ENST00000527897 BUB3O43684 328 aa11.41□□□□□ -0.58
CAPN1-213ENST00000527897 SSSCA1O60232 199 aa11.41□□□□□ -0.58
CAPN1-213ENST00000527897 NKX2-1P43699 371 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-213ENST00000527897 EWSR1Q01844 656 aaKnown RBP eCLIP11.41□□□□□ -0.58
CAPN1-213ENST00000527897 PSMG4Q5JS54 123 aa11.41□□□□□ -0.58
CAPN1-213ENST00000527897 RARRES2Q99969 163 aa11.41□□□□□ -0.58
CAPN1-213ENST00000527897 C20orf85Q9H1P6 137 aa11.41□□□□□ -0.58
CAPN1-213ENST00000527897 PFDN2Q9UHV9 154 aa11.41□□□□□ -0.58
CAPN1-213ENST00000527897 RYR2Q92736 4967 aa11.41□□□□□ -0.58
CAPN1-213ENST00000527897 TRAV6A0A075B6T7 132 aa11.4□□□□□ -0.58
CAPN1-213ENST00000527897 SMCO3A2RU48 225 aa11.4□□□□□ -0.58
CAPN1-213ENST00000527897 SNRPGP15A8MWD9 76 aa11.4□□□□□ -0.58
CAPN1-213ENST00000527897 PLA2G10O15496 165 aa11.4□□□□□ -0.58
CAPN1-213ENST00000527897 AKR1C1Q04828 323 aa11.4□□□□□ -0.58
CAPN1-213ENST00000527897 ACTL10Q5JWF8 245 aa11.4□□□□□ -0.58
CAPN1-213ENST00000527897 OR8G2PQ6IF36 304 aa11.4□□□□□ -0.58
CAPN1-213ENST00000527897 OR11H2Q8NH07 326 aa11.4□□□□□ -0.58
CAPN1-213ENST00000527897 PSENENQ9NZ42 101 aa11.4□□□□□ -0.58
CAPN1-213ENST00000527897 GSKIPQ9P0R6 139 aa11.4□□□□□ -0.58
CAPN1-213ENST00000527897 NUP62P37198 522 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-213ENST00000527897 SNRPD3P62318 126 aaKnown RBP11.39□□□□□ -0.59
CAPN1-213ENST00000527897 IAH1Q2TAA2 248 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-213ENST00000527897 OR4D5Q8NGN0 318 aa11.39□□□□□ -0.59
CAPN1-213ENST00000527897 GATAD1Q8WUU5 269 aa11.39□□□□□ -0.59
CAPN1-213ENST00000527897 TRGV9Q99603 122 aa11.39□□□□□ -0.59
CAPN1-213ENST00000527897 NRN1Q9NPD7 142 aa11.39□□□□□ -0.59
CAPN1-213ENST00000527897 IGKV1OR2-108A0A075B7D4 117 aa11.38□□□□□ -0.59
CAPN1-213ENST00000527897 CCSO14618 274 aa11.38□□□□□ -0.59
CAPN1-213ENST00000527897 JTBO76095 146 aa11.38□□□□□ -0.59
CAPN1-213ENST00000527897 ID3Q02535 119 aa11.38□□□□□ -0.59
CAPN1-213ENST00000527897 GSG1LQ6UXU4 331 aa11.38□□□□□ -0.59
CAPN1-213ENST00000527897 ACOT7LQ6ZUV0 252 aa11.38□□□□□ -0.59
CAPN1-213ENST00000527897 TRPT1Q86TN4 253 aaKnown RBP11.38□□□□□ -0.59
CAPN1-213ENST00000527897 TMEM217Q8N7C4 229 aa11.38□□□□□ -0.59
CAPN1-213ENST00000527897 THAP8Q8NA92 274 aa11.38□□□□□ -0.59
CAPN1-213ENST00000527897 FAM25EA8MYX2 175 aa11.37□□□□□ -0.59
CAPN1-213ENST00000527897 PRSS46E5RG02 174 aa11.37□□□□□ -0.59
CAPN1-213ENST00000527897 DEFB4AO15263 64 aa11.37□□□□□ -0.59
CAPN1-213ENST00000527897 TCRBP04435 133 aa11.37□□□□□ -0.59
CAPN1-213ENST00000527897 GATA2P23769 480 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-213ENST00000527897 CNPY1Q3B7I2 92 aa11.37□□□□□ -0.59
CAPN1-213ENST00000527897 ZBTB8BQ8NAP8 495 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-213ENST00000527897 MITD1Q8WV92 249 aa11.37□□□□□ -0.59
CAPN1-213ENST00000527897 RAB40CQ96S21 281 aa11.37□□□□□ -0.59
CAPN1-213ENST00000527897 NUDT15Q9NV35 164 aa11.37□□□□□ -0.59
CAPN1-213ENST00000527897 METTL15P1P0C7V9 234 aa11.36□□□□□ -0.59
CAPN1-213ENST00000527897 ORM2P19652 201 aa11.36□□□□□ -0.59
CAPN1-213ENST00000527897 RRAS2P62070 204 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-213ENST00000527897 OR8I2Q8N0Y5 310 aa11.36□□□□□ -0.59
CAPN1-213ENST00000527897 BPIFCQ8NFQ6 507 aa11.36□□□□□ -0.59
CAPN1-213ENST00000527897 LINC00052Q96N35 136 aa11.36□□□□□ -0.59
CAPN1-213ENST00000527897 SEC22CQ9BRL7 303 aa11.36□□□□□ -0.59
CAPN1-213ENST00000527897 CCDC32Q9BV29 185 aa11.36□□□□□ -0.59
CAPN1-213ENST00000527897 SLC25A22Q9H936 323 aa11.36□□□□□ -0.59
CAPN1-213ENST00000527897 CLEC5AQ9NY25 188 aa11.36□□□□□ -0.59
CAPN1-213ENST00000527897 CCNKO75909 580 aa11.35□□□□□ -0.59
CAPN1-213ENST00000527897 SPP1P10451 314 aa11.35□□□□□ -0.59
CAPN1-213ENST00000527897 C4BPBP20851 252 aa11.35□□□□□ -0.59
CAPN1-213ENST00000527897 ZNF846Q147U1 533 aa11.35□□□□□ -0.59
CAPN1-213ENST00000527897 MORN3Q6PF18 240 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-213ENST00000527897 OR1B1Q8NGR6 318 aa11.35□□□□□ -0.59
CAPN1-213ENST00000527897 SMIM8Q96KF7 97 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms