RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 PPIAL4CA0A0B4J2A2 164 aa16.25■□□□□ 0.19
SMIM3-201ENST00000526627 LY6LH3BQJ8 138 aa16.25■□□□□ 0.19
SMIM3-201ENST00000526627 PPIAL4GP0DN37 164 aa16.25■□□□□ 0.19
SMIM3-201ENST00000526627 PLP1P60201 277 aa16.25■□□□□ 0.19
SMIM3-201ENST00000526627 RCHY1Q96PM5 261 aa16.25■□□□□ 0.19
SMIM3-201ENST00000526627 FBXL15Q9H469 300 aa16.25■□□□□ 0.19
SMIM3-201ENST00000526627 KLF12Q9Y4X4 402 aa16.25■□□□□ 0.19
SMIM3-201ENST00000526627 ZNF705FA8MVS1 300 aaPredicted RBP16.24■□□□□ 0.19
SMIM3-201ENST00000526627 ZNF705DP0CH99 300 aaPredicted RBP16.24■□□□□ 0.19
SMIM3-201ENST00000526627 ZNF705BP0CI00 300 aaPredicted RBP16.24■□□□□ 0.19
SMIM3-201ENST00000526627 GP9P14770 177 aa16.24■□□□□ 0.19
SMIM3-201ENST00000526627 ZNF600Q6ZNG1 722 aa16.24■□□□□ 0.19
SMIM3-201ENST00000526627 GRAMD2BQ96HH9 432 aa16.24■□□□□ 0.19
SMIM3-201ENST00000526627 PGPA6NDG6 321 aa16.24■□□□□ 0.19
SMIM3-201ENST00000526627 HYPMO75409 117 aa16.24■□□□□ 0.19
SMIM3-201ENST00000526627 RBP4P02753 201 aa16.24■□□□□ 0.19
SMIM3-201ENST00000526627 TDRG1Q3Y452 100 aa16.24■□□□□ 0.19
SMIM3-201ENST00000526627 LDLRAD2Q5SZI1 272 aa16.24■□□□□ 0.19
SMIM3-201ENST00000526627 TEX43Q6ZNM6 134 aa16.24■□□□□ 0.19
SMIM3-201ENST00000526627 C8orf46Q8TAG6 207 aa16.24■□□□□ 0.19
SMIM3-201ENST00000526627 WIPF2Q8TF74 440 aaPredicted RBP16.24■□□□□ 0.19
SMIM3-201ENST00000526627 FAM90A27PA6NNH2 459 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 CORTO00230 105 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 SLC25A5P05141 298 aaKnown RBP16.23■□□□□ 0.19
SMIM3-201ENST00000526627 GPX1P07203 203 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 NBEAP1P0C6P0 100 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 SRIP30626 198 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 LBHQ53QV2 105 aaPredicted RBP16.23■□□□□ 0.19
SMIM3-201ENST00000526627 GDF5OSQ5U4N7 250 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 TOMM20LQ6UXN7 152 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 C22orf15Q8WYQ4 148 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 SAMD10Q9BYL1 202 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 BRS3P32247 399 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 SLAQ13239 276 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 FBXL19-AS1Q494R0 122 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 ZNF672Q499Z4 452 aaPredicted RBP16.23■□□□□ 0.19
SMIM3-201ENST00000526627 NUP35Q8NFH5 326 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 RPEQ96AT9 228 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 SGK494Q96LW2 274 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 FBXL7Q9UJT9 491 aa16.23■□□□□ 0.19
SMIM3-201ENST00000526627 EREGO14944 169 aa16.22■□□□□ 0.19
SMIM3-201ENST00000526627 PTPRZ1P23471 2315 aaPredicted RBP16.22■□□□□ 0.19
SMIM3-201ENST00000526627 LEMD1Q68G75 181 aa16.22■□□□□ 0.19
SMIM3-201ENST00000526627 A0A1W2PS18 150 aa16.22■□□□□ 0.19
SMIM3-201ENST00000526627 APCSP02743 223 aa16.22■□□□□ 0.19
SMIM3-201ENST00000526627 PRR27Q6MZM9 219 aa16.22■□□□□ 0.19
SMIM3-201ENST00000526627 SRSF12Q8WXF0 261 aaKnown RBP16.22■□□□□ 0.19
SMIM3-201ENST00000526627 I3L2K1 104 aa16.21■□□□□ 0.19
SMIM3-201ENST00000526627 IGLC1P0CG04 106 aa16.21■□□□□ 0.19
SMIM3-201ENST00000526627 USF2Q15853 346 aaPredicted RBP16.21■□□□□ 0.19
SMIM3-201ENST00000526627 RASL11AQ6T310 242 aa16.21■□□□□ 0.19
SMIM3-201ENST00000526627 Q8N976 141 aa16.21■□□□□ 0.19
SMIM3-201ENST00000526627 MLST8Q9BVC4 326 aa16.21■□□□□ 0.19
SMIM3-201ENST00000526627 ZNF331Q9NQX6 463 aaPredicted RBP16.21■□□□□ 0.19
SMIM3-201ENST00000526627 CBLN4Q9NTU7 201 aa16.21■□□□□ 0.19
SMIM3-201ENST00000526627 PTPRQQ9UMZ3 2332 aa16.21■□□□□ 0.19
SMIM3-201ENST00000526627 VWC2LB2RUY7 222 aa16.2■□□□□ 0.18
SMIM3-201ENST00000526627 ZNF253O75346 499 aa16.2■□□□□ 0.18
SMIM3-201ENST00000526627 SIGLECL1Q8N7X8 197 aa16.2■□□□□ 0.18
SMIM3-201ENST00000526627 LY6G5BQ8NDX9 201 aa16.2■□□□□ 0.18
SMIM3-201ENST00000526627 KCNS1Q96KK3 526 aa16.2■□□□□ 0.18
SMIM3-201ENST00000526627 H3BTX0 84 aa16.2■□□□□ 0.18
SMIM3-201ENST00000526627 RNF224P0DH78 156 aa16.2■□□□□ 0.18
SMIM3-201ENST00000526627 CA7P43166 264 aa16.2■□□□□ 0.18
SMIM3-201ENST00000526627 UBE2G1P62253 170 aa16.2■□□□□ 0.18
SMIM3-201ENST00000526627 PSG1P11464 419 aa16.19■□□□□ 0.18
SMIM3-201ENST00000526627 CDSNQ15517 529 aa16.19■□□□□ 0.18
SMIM3-201ENST00000526627 LINC00322Q6ZN03 302 aaPredicted RBP16.19■□□□□ 0.18
SMIM3-201ENST00000526627 TSKUQ8WUA8 353 aa16.19■□□□□ 0.18
SMIM3-201ENST00000526627 SMIM12Q96EX1 92 aa16.19■□□□□ 0.18
SMIM3-201ENST00000526627 GPR82Q96P67 336 aa16.19■□□□□ 0.18
SMIM3-201ENST00000526627 NEU1Q99519 415 aa16.19■□□□□ 0.18
SMIM3-201ENST00000526627 ATG101Q9BSB4 218 aa16.19■□□□□ 0.18
SMIM3-201ENST00000526627 FAM103A1Q9BTL3 118 aaKnown RBP16.19■□□□□ 0.18
SMIM3-201ENST00000526627 TBL2Q9Y4P3 447 aaKnown RBP16.19■□□□□ 0.18
SMIM3-201ENST00000526627 C5orf17Q8NAS9 161 aa16.19■□□□□ 0.18
SMIM3-201ENST00000526627 RNF5Q99942 180 aa16.19■□□□□ 0.18
SMIM3-201ENST00000526627 SNHG12Q9BXW3 62 aa16.19■□□□□ 0.18
SMIM3-201ENST00000526627 Q9H3A6 140 aa16.19■□□□□ 0.18
SMIM3-201ENST00000526627 RPH3ALQ9UNE2 315 aa16.19■□□□□ 0.18
SMIM3-201ENST00000526627 TLN1Q9Y490 2541 aaKnown RBP16.19■□□□□ 0.18
SMIM3-201ENST00000526627 HIST1H1EP10412 219 aaKnown RBP16.18■□□□□ 0.18
SMIM3-201ENST00000526627 OR8B3Q8NGG8 313 aa16.18■□□□□ 0.18
SMIM3-201ENST00000526627 VN1R17PQ8TDU5 208 aa16.18■□□□□ 0.18
SMIM3-201ENST00000526627 TMEM68Q96MH6 324 aa16.18■□□□□ 0.18
SMIM3-201ENST00000526627 OR8B2Q96RD0 313 aa16.18■□□□□ 0.18
SMIM3-201ENST00000526627 LY6HO94772 140 aa16.18■□□□□ 0.18
SMIM3-201ENST00000526627 TOMM40O96008 361 aa16.18■□□□□ 0.18
SMIM3-201ENST00000526627 C20orf144Q9BQM9 153 aa16.18■□□□□ 0.18
SMIM3-201ENST00000526627 CHRDL1Q9BU40 450 aa16.18■□□□□ 0.18
SMIM3-201ENST00000526627 NRN1Q9NPD7 142 aa16.18■□□□□ 0.18
SMIM3-201ENST00000526627 ONECUT1Q9UBC0 465 aa16.18■□□□□ 0.18
SMIM3-201ENST00000526627 HIGD1AQ9Y241 93 aa16.18■□□□□ 0.18
SMIM3-201ENST00000526627 HIGD1CA8MV81 97 aa16.17■□□□□ 0.18
SMIM3-201ENST00000526627 TIMM23O14925 209 aa16.17■□□□□ 0.18
SMIM3-201ENST00000526627 LTAP01374 205 aa16.17■□□□□ 0.18
SMIM3-201ENST00000526627 TCRAP04437 139 aa16.17■□□□□ 0.18
SMIM3-201ENST00000526627 AMTP48728 403 aa16.17■□□□□ 0.18
SMIM3-201ENST00000526627 C18orf32Q8TCD1 76 aa16.17■□□□□ 0.18
SMIM3-201ENST00000526627 WNT10AQ9GZT5 417 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms