RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 RARRES3Q9UL19 164 aa2.42□□□□□ -2.02
COPB1-205ENST00000526527 ZNF443Q9Y2A4 671 aaPredicted RBP2.42□□□□□ -2.02
COPB1-205ENST00000526527 PCNTO95613 3336 aa2.42□□□□□ -2.02
COPB1-205ENST00000526527 DOCK3Q8IZD9 2030 aa2.42□□□□□ -2.02
COPB1-205ENST00000526527 TRAV27A0A087WT01 109 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 IGHV1OR21-1A0A087WYE8 117 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 TRAV13-1A0A0B4J241 112 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 TRAV4A0A0B4J268 109 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 IGHV3OR16-9A0A0B4J2B5 98 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 LOC107984640A0A0U1RRK4 108 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 C3orf85A0A1B0GTC6 90 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 SPAARA0A1B0GVQ0 90 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 C5orf63A6NC05 138 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 RBMY1BA6NDE4 496 aaKnown RBP2.41□□□□□ -2.02
COPB1-205ENST00000526527 ARRDC5A6NEK1 342 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 RBMY1EA6NEQ0 496 aaKnown RBP2.41□□□□□ -2.02
COPB1-205ENST00000526527 E9PLD3 99 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 J3QQQ9 107 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 K7EP34 96 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 GEMIN2O14893 280 aaKnown RBP2.41□□□□□ -2.02
COPB1-205ENST00000526527 GABARAPO95166 117 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 NAPSAO96009 420 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 CFDP00746 253 aaPredicted RBP2.41□□□□□ -2.02
COPB1-205ENST00000526527 RBMY1DP0C7P1 496 aaKnown RBP2.41□□□□□ -2.02
COPB1-205ENST00000526527 CECR9P0C854 216 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 RBMY1A1P0DJD3 496 aaKnown RBP2.41□□□□□ -2.02
COPB1-205ENST00000526527 SCGB1C2P0DMR2 95 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 P0DMU3 169 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 FAM231AP0DMU4 169 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 FAM231CP0DMU5 169 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 LGALS3P17931 250 aaKnown RBP2.41□□□□□ -2.02
COPB1-205ENST00000526527 LMO2P25791 158 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 IL3RAP26951 378 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 PSMB8P28062 276 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 MYCNOSP40205 109 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 CTRLP40313 264 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 HERVK_113P63121 156 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 ENDOGQ14249 297 aaKnown RBP2.41□□□□□ -2.02
COPB1-205ENST00000526527 PMCHL1Q16048 86 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 NSUN5P1Q3KNT7 163 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 TMEM52BQ4KMG9 183 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 KLF17Q5JT82 389 aaPredicted RBP2.41□□□□□ -2.02
COPB1-205ENST00000526527 COA6Q5JTJ3 125 aaKnown RBP2.41□□□□□ -2.02
COPB1-205ENST00000526527 TMEM236Q5W0B7 351 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 CXCL17Q6UXB2 119 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 HEPN1Q6WQI6 88 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 Q6ZS92 163 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 SLC25A42Q86VD7 318 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 MSRB3Q8IXL7 192 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 PIANPQ8IYJ0 282 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 OR9G1Q8NH87 305 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 ATP6V0E2Q8NHE4 81 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 VSTM2AQ8TAG5 236 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 BRK1Q8WUW1 75 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 FGF14Q92915 247 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 MAL2Q969L2 176 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 RBMXL1Q96E39 390 aaKnown RBP2.41□□□□□ -2.02
COPB1-205ENST00000526527 S100A16Q96FQ6 103 aaKnown RBP2.41□□□□□ -2.02
COPB1-205ENST00000526527 YPEL4Q96NS1 127 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 HIST1H4GQ99525 98 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 SPIN2BQ9BPZ2 258 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 C19orf24Q9BVV8 132 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 TSSK6Q9BXA6 273 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 SLIRPQ9GZT3 109 aaKnown RBP2.41□□□□□ -2.02
COPB1-205ENST00000526527 AICDAQ9GZX7 198 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 ST20Q9HBF5 79 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 CALYQ9NYX4 217 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 OR5V1Q9UGF6 321 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 CACFD1Q9UGQ2 172 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 KLK13Q9UKR3 277 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 NEUROG3Q9Y4Z2 214 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 ENPP4Q9Y6X5 453 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 V9GY05 133 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 FER1L5A0AVI2 2057 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 MCM3APO60318 1980 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 TRIOBPQ9H2D6 2365 aa2.41□□□□□ -2.02
COPB1-205ENST00000526527 FRMPD3Q5JV73 1810 aa2.4□□□□□ -2.02
COPB1-205ENST00000526527 PDE4DIPQ5VU43 2346 aa2.4□□□□□ -2.02
COPB1-205ENST00000526527 A0A087WWC5 75 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 A0A087WWV3 80 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 SMIM26A0A096LP01 95 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 TRAV8-3A0A0A6YYJ7 113 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 LOC100131303A0A0U1RQF7 123 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 KANTRA0A1W2PQU2 76 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 IGLC7A0M8Q6 106 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 ZFP92A6NM28 416 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 NDUFC2-KCTD14E9PQ53 114 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 H3BMG7 143 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 CCDC179H3BU77 68 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 SLC37A4O43826 429 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 PROSCO94903 275 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 SFT2D2O95562 160 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 HRASP01112 189 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 TPT1P13693 172 aaKnown RBP2.4□□□□□ -2.03
COPB1-205ENST00000526527 RPL22P35268 128 aaKnown RBP2.4□□□□□ -2.03
COPB1-205ENST00000526527 PSMB3P49720 205 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 P2RX1P51575 399 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 RND2P52198 227 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 MFAP2P55001 183 aa2.4□□□□□ -2.03
COPB1-205ENST00000526527 FOXA3P55318 350 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms