RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 C7orf66A4D0T2 115 aa12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 RBMY1BA6NDE4 496 aaKnown RBP12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 RBMY1EA6NEQ0 496 aaKnown RBP12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 PRAF2O60831 178 aa12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 TSC22D2O75157 780 aa12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 HNRNPCP07910 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 RBMY1DP0C7P1 496 aaKnown RBP12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 TFPI2P48307 235 aa12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 USF2Q15853 346 aaPredicted RBP12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 HAGHQ16775 308 aa12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 OR8G2PQ6IF36 304 aa12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 OR51G1Q8NGK1 321 aa12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 NARS2Q96I59 477 aaKnown RBP12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 TRGV9Q99603 122 aa12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 UBQLN2Q9UHD9 624 aa12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 U3KQK5 164 aa12.1□□□□□ -0.47
SSSCA1-202ENST00000526433 NBEAL2Q6ZNJ1 2754 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 IGKV1OR2-108A0A075B7D4 117 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 K7EPK0 472 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 L7N2F9 121 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 CCNKO75909 580 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 FABP1P07148 127 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 METTL15P1P0C7V9 234 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 P2RY1P47900 373 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 RPL11P62913 178 aaKnown RBP12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 VAMP2P63027 116 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 PAFAH1B2P68402 229 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 IL15RAQ13261 267 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 OR2F1Q13607 317 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 ACOT7LQ6ZUV0 252 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 WFDC3Q8IUB2 231 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 GRAMD2BQ96HH9 432 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 RABAC1Q9UI14 185 aa12.09□□□□□ -0.47
SSSCA1-202ENST00000526433 DNASE2O00115 360 aaPredicted RBP12.08□□□□□ -0.48
SSSCA1-202ENST00000526433 C16orf54Q6UWD8 224 aa12.08□□□□□ -0.48
SSSCA1-202ENST00000526433 RNF125Q96EQ8 232 aa12.08□□□□□ -0.48
SSSCA1-202ENST00000526433 MS4A6AQ9H2W1 248 aa12.08□□□□□ -0.48
SSSCA1-202ENST00000526433 ZMAT4Q9H898 229 aa12.08□□□□□ -0.48
SSSCA1-202ENST00000526433 SMCO3A2RU48 225 aa12.07□□□□□ -0.48
SSSCA1-202ENST00000526433 SIX6O95475 246 aa12.07□□□□□ -0.48
SSSCA1-202ENST00000526433 CMC4P56277 68 aaPredicted RBP12.07□□□□□ -0.48
SSSCA1-202ENST00000526433 AKR1C1Q04828 323 aa12.07□□□□□ -0.48
SSSCA1-202ENST00000526433 ODF3L2Q3SX64 289 aa12.07□□□□□ -0.48
SSSCA1-202ENST00000526433 TMEM144Q7Z5S9 345 aa12.07□□□□□ -0.48
SSSCA1-202ENST00000526433 OR10P1Q8NGE3 313 aa12.07□□□□□ -0.48
SSSCA1-202ENST00000526433 CITED4Q96RK1 184 aa12.07□□□□□ -0.48
SSSCA1-202ENST00000526433 TM2D3Q9BRN9 247 aa12.07□□□□□ -0.48
SSSCA1-202ENST00000526433 PBDC1Q9BVG4 233 aa12.07□□□□□ -0.48
SSSCA1-202ENST00000526433 C11orf1Q9H5F2 150 aa12.07□□□□□ -0.48
SSSCA1-202ENST00000526433 GOSR2O14653 212 aa12.06□□□□□ -0.48
SSSCA1-202ENST00000526433 BUB3O43684 328 aa12.06□□□□□ -0.48
SSSCA1-202ENST00000526433 BCAP31P51572 246 aa12.06□□□□□ -0.48
SSSCA1-202ENST00000526433 S100A10P60903 97 aa12.06□□□□□ -0.48
SSSCA1-202ENST00000526433 LYZP61626 148 aa12.06□□□□□ -0.48
SSSCA1-202ENST00000526433 RRAS2P62070 204 aaPredicted RBP12.06□□□□□ -0.48
SSSCA1-202ENST00000526433 DLK1P80370 383 aa12.06□□□□□ -0.48
SSSCA1-202ENST00000526433 ARL16Q0P5N6 197 aa12.06□□□□□ -0.48
SSSCA1-202ENST00000526433 RAB32Q13637 225 aa12.06□□□□□ -0.48
SSSCA1-202ENST00000526433 FAM110AQ9BQ89 295 aa12.06□□□□□ -0.48
SSSCA1-202ENST00000526433 TENM3Q9P273 2699 aa12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 TRAV2A0A0B4J234 112 aa12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 FAM24AA6NFZ4 105 aa12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 DEDDO75618 318 aa12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 CFDP00746 253 aaPredicted RBP12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 PVALBP20472 110 aaPredicted RBP12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 GATA2P23769 480 aaPredicted RBP12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 EIF2B2P49770 351 aaKnown RBP12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 TMEM182Q6ZP80 229 aaPredicted RBP12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 STXBP6Q8NFX7 210 aa12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 GLMPQ8WWB7 406 aa12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 RCHY1Q96PM5 261 aa12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 NPVFQ9HCQ7 196 aa12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 PFDN2Q9UHV9 154 aa12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 STAB2Q8WWQ8 2551 aa12.05□□□□□ -0.48
SSSCA1-202ENST00000526433 LOC102724200A0A096LPH7 203 aaPredicted RBP12.04□□□□□ -0.48
SSSCA1-202ENST00000526433 HELTA6NFD8 242 aa12.04□□□□□ -0.48
SSSCA1-202ENST00000526433 FNDC10F2Z333 226 aa12.04□□□□□ -0.48
SSSCA1-202ENST00000526433 CAV2P51636 162 aa12.04□□□□□ -0.48
SSSCA1-202ENST00000526433 AP2S1P53680 142 aaPredicted RBP12.04□□□□□ -0.48
SSSCA1-202ENST00000526433 APRG1Q8IVJ8 170 aa12.04□□□□□ -0.48
SSSCA1-202ENST00000526433 BPIFCQ8NFQ6 507 aa12.04□□□□□ -0.48
SSSCA1-202ENST00000526433 SPATA25Q9BR10 227 aa12.04□□□□□ -0.48
SSSCA1-202ENST00000526433 MGAT4CQ9UBM8 478 aa12.04□□□□□ -0.48
SSSCA1-202ENST00000526433 K7EQG2 157 aa12.03□□□□□ -0.48
SSSCA1-202ENST00000526433 SSNA1O43805 119 aa12.03□□□□□ -0.48
SSSCA1-202ENST00000526433 CYP2G1PQ6ZSU1 146 aa12.03□□□□□ -0.48
SSSCA1-202ENST00000526433 STPG3Q8N7X2 389 aa12.03□□□□□ -0.48
SSSCA1-202ENST00000526433 GGACTQ9BVM4 153 aa12.03□□□□□ -0.48
SSSCA1-202ENST00000526433 GGTLC1Q9BX51 225 aa12.03□□□□□ -0.48
SSSCA1-202ENST00000526433 NMES1Q9C002 83 aa12.03□□□□□ -0.48
SSSCA1-202ENST00000526433 MAP6D1Q9H9H5 199 aa12.03□□□□□ -0.48
SSSCA1-202ENST00000526433 CST7O76096 145 aa12.02□□□□□ -0.49
SSSCA1-202ENST00000526433 PTTG1O95997 202 aa12.02□□□□□ -0.49
SSSCA1-202ENST00000526433 NUP62P37198 522 aaPredicted RBP12.02□□□□□ -0.49
SSSCA1-202ENST00000526433 CYCSP99999 105 aaKnown RBP12.02□□□□□ -0.49
SSSCA1-202ENST00000526433 ZNF124Q15973 351 aa12.02□□□□□ -0.49
SSSCA1-202ENST00000526433 FAM24BQ8N5W8 94 aa12.02□□□□□ -0.49
SSSCA1-202ENST00000526433 PPP1R14BQ96C90 147 aa12.02□□□□□ -0.49
SSSCA1-202ENST00000526433 WWC2-AS2Q96NR7 200 aa12.02□□□□□ -0.49
SSSCA1-202ENST00000526433 RLN2P04090 185 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms