RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 LSM5Q9Y4Y9 91 aaKnown RBP12.94□□□□□ -0.34
LMX1B-203ENST00000526117 TRAV2A0A0B4J234 112 aa12.93□□□□□ -0.34
LMX1B-203ENST00000526117 SSNA1O43805 119 aa12.93□□□□□ -0.34
LMX1B-203ENST00000526117 DEDDO75618 318 aa12.93□□□□□ -0.34
LMX1B-203ENST00000526117 HNRNPCP07910 306 aaKnown RBP eCLIP12.93□□□□□ -0.34
LMX1B-203ENST00000526117 IGHV4-30-4P0DP06 118 aa12.93□□□□□ -0.34
LMX1B-203ENST00000526117 H2BFSP57053 126 aa12.93□□□□□ -0.34
LMX1B-203ENST00000526117 CD81P60033 236 aa12.93□□□□□ -0.34
LMX1B-203ENST00000526117 ZNF90Q03938 601 aa12.93□□□□□ -0.34
LMX1B-203ENST00000526117 USF2Q15853 346 aaPredicted RBP12.93□□□□□ -0.34
LMX1B-203ENST00000526117 ST8SIA2Q92186 375 aa12.93□□□□□ -0.34
LMX1B-203ENST00000526117 RNF125Q96EQ8 232 aa12.93□□□□□ -0.34
LMX1B-203ENST00000526117 NPVFQ9HCQ7 196 aa12.93□□□□□ -0.34
LMX1B-203ENST00000526117 OR4C46A6NHA9 309 aa12.92□□□□□ -0.34
LMX1B-203ENST00000526117 APOHP02749 345 aaPredicted RBP12.92□□□□□ -0.34
LMX1B-203ENST00000526117 AKR1C1Q04828 323 aa12.92□□□□□ -0.34
LMX1B-203ENST00000526117 RGS21Q2M5E4 152 aa12.92□□□□□ -0.34
LMX1B-203ENST00000526117 GRAMD2BQ96HH9 432 aa12.92□□□□□ -0.34
LMX1B-203ENST00000526117 PFDN2Q9UHV9 154 aa12.92□□□□□ -0.34
LMX1B-203ENST00000526117 RABAC1Q9UI14 185 aa12.92□□□□□ -0.34
LMX1B-203ENST00000526117 SLC45A2Q9UMX9 530 aa12.92□□□□□ -0.34
LMX1B-203ENST00000526117 CCNKO75909 580 aa12.91□□□□□ -0.34
LMX1B-203ENST00000526117 RLN2P04090 185 aa12.91□□□□□ -0.34
LMX1B-203ENST00000526117 CD7P09564 240 aa12.91□□□□□ -0.34
LMX1B-203ENST00000526117 NHLRC4P0CG21 123 aaPredicted RBP12.91□□□□□ -0.34
LMX1B-203ENST00000526117 EIF2B2P49770 351 aaKnown RBP12.91□□□□□ -0.34
LMX1B-203ENST00000526117 S100A10P60903 97 aa12.91□□□□□ -0.34
LMX1B-203ENST00000526117 MGAT4CQ9UBM8 478 aa12.91□□□□□ -0.34
LMX1B-203ENST00000526117 ALG5Q9Y673 324 aa12.91□□□□□ -0.34
LMX1B-203ENST00000526117 IGHV3-49A0A0A0MS15 119 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 BUB3O43684 328 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 SIX6O95475 246 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 FRMD6-AS1P0C7T7 363 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 P2RY1P47900 373 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 SULT1A1P50225 295 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 CAV2P51636 162 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 CMC4P56277 68 aaPredicted RBP12.9□□□□□ -0.34
LMX1B-203ENST00000526117 SELENOTP62341 195 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 PAFAH1B2P68402 229 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 ARL16Q0P5N6 197 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 VWC2Q2TAL6 325 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 C16orf54Q6UWD8 224 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 TCF24Q7RTU0 167 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 TMEM252Q8N6L7 170 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 GLMPQ8WWB7 406 aa12.9□□□□□ -0.34
LMX1B-203ENST00000526117 OR11H12B2RN74 326 aa12.89□□□□□ -0.35
LMX1B-203ENST00000526117 E5RGE8 158 aa12.89□□□□□ -0.35
LMX1B-203ENST00000526117 PET100P0DJ07 73 aa12.89□□□□□ -0.35
LMX1B-203ENST00000526117 S100A11P31949 105 aa12.89□□□□□ -0.35
LMX1B-203ENST00000526117 BCAP31P51572 246 aa12.89□□□□□ -0.35
LMX1B-203ENST00000526117 PLP1P60201 277 aa12.89□□□□□ -0.35
LMX1B-203ENST00000526117 OXA1LQ15070 435 aa12.89□□□□□ -0.35
LMX1B-203ENST00000526117 C1orf194Q5T5A4 169 aa12.89□□□□□ -0.35
LMX1B-203ENST00000526117 TEPPQ6URK8 271 aa12.89□□□□□ -0.35
LMX1B-203ENST00000526117 LINC00322Q6ZN03 302 aaPredicted RBP12.89□□□□□ -0.35
LMX1B-203ENST00000526117 STX12Q86Y82 276 aa12.89□□□□□ -0.35
LMX1B-203ENST00000526117 LILRB2Q8N423 598 aa12.89□□□□□ -0.35
LMX1B-203ENST00000526117 BPIFCQ8NFQ6 507 aa12.89□□□□□ -0.35
LMX1B-203ENST00000526117 PPP1R1CQ8WVI7 109 aa12.89□□□□□ -0.35
LMX1B-203ENST00000526117 IGHV3OR16-13A0A075B7E8 117 aa12.88□□□□□ -0.35
LMX1B-203ENST00000526117 IGHV3-74A0A0B4J1X5 117 aa12.88□□□□□ -0.35
LMX1B-203ENST00000526117 HELTA6NFD8 242 aa12.88□□□□□ -0.35
LMX1B-203ENST00000526117 DFFBO76075 338 aa12.88□□□□□ -0.35
LMX1B-203ENST00000526117 AP2S1P53680 142 aaPredicted RBP12.88□□□□□ -0.35
LMX1B-203ENST00000526117 RRAS2P62070 204 aaPredicted RBP12.88□□□□□ -0.35
LMX1B-203ENST00000526117 HBG1P69891 147 aa12.88□□□□□ -0.35
LMX1B-203ENST00000526117 HBG2P69892 147 aa12.88□□□□□ -0.35
LMX1B-203ENST00000526117 SLC38A11Q08AI6 406 aa12.88□□□□□ -0.35
LMX1B-203ENST00000526117 CYP2G1PQ6ZSU1 146 aa12.88□□□□□ -0.35
LMX1B-203ENST00000526117 ASB13Q8WXK3 278 aa12.88□□□□□ -0.35
LMX1B-203ENST00000526117 SELENOKQ9Y6D0 94 aa12.88□□□□□ -0.35
LMX1B-203ENST00000526117 IGSF23A1L1A6 192 aa12.87□□□□□ -0.35
LMX1B-203ENST00000526117 SMCO3A2RU48 225 aa12.87□□□□□ -0.35
LMX1B-203ENST00000526117 FAM24AA6NFZ4 105 aa12.87□□□□□ -0.35
LMX1B-203ENST00000526117 H0YIZ8 118 aa12.87□□□□□ -0.35
LMX1B-203ENST00000526117 S100A7P31151 101 aa12.87□□□□□ -0.35
LMX1B-203ENST00000526117 BAXQ07812 192 aa12.87□□□□□ -0.35
LMX1B-203ENST00000526117 ATP6V1FQ16864 119 aa12.87□□□□□ -0.35
LMX1B-203ENST00000526117 PXDC1Q5TGL8 231 aa12.87□□□□□ -0.35
LMX1B-203ENST00000526117 SLC25A31Q9H0C2 315 aa12.87□□□□□ -0.35
LMX1B-203ENST00000526117 MS4A6AQ9H2W1 248 aa12.87□□□□□ -0.35
LMX1B-203ENST00000526117 CST7O76096 145 aa12.86□□□□□ -0.35
LMX1B-203ENST00000526117 MPC2O95563 127 aa12.86□□□□□ -0.35
LMX1B-203ENST00000526117 LYZP61626 148 aa12.86□□□□□ -0.35
LMX1B-203ENST00000526117 ODF3L2Q3SX64 289 aa12.86□□□□□ -0.35
LMX1B-203ENST00000526117 ZNF546Q86UE3 836 aa12.86□□□□□ -0.35
LMX1B-203ENST00000526117 CHAC2Q8WUX2 184 aa12.86□□□□□ -0.35
LMX1B-203ENST00000526117 PBDC1Q9BVG4 233 aa12.86□□□□□ -0.35
LMX1B-203ENST00000526117 TUBA4BQ9H853 241 aa12.86□□□□□ -0.35
LMX1B-203ENST00000526117 SEPSECSQ9HD40 501 aaKnown RBP12.86□□□□□ -0.35
LMX1B-203ENST00000526117 OR5AC2Q9NZP5 309 aa12.86□□□□□ -0.35
LMX1B-203ENST00000526117 FBXL17Q9UF56 701 aa12.86□□□□□ -0.35
LMX1B-203ENST00000526117 DNAH9Q9NYC9 4486 aa12.85□□□□□ -0.35
LMX1B-203ENST00000526117 IGHV3-66A0A0C4DH42 116 aa12.85□□□□□ -0.35
LMX1B-203ENST00000526117 LYL1P12980 280 aa12.85□□□□□ -0.35
LMX1B-203ENST00000526117 OR2F1Q13607 317 aa12.85□□□□□ -0.35
LMX1B-203ENST00000526117 TMEM182Q6ZP80 229 aaPredicted RBP12.85□□□□□ -0.35
LMX1B-203ENST00000526117 DEFB125Q8N687 156 aa12.85□□□□□ -0.35
LMX1B-203ENST00000526117 DCANP1Q8TF63 244 aa12.85□□□□□ -0.35
LMX1B-203ENST00000526117 RNF126Q9BV68 326 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms