RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 IGKV1-5P01602 117 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 IGKV1D-12P01611 117 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 IGHV3-13P01766 116 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 MAS1P04201 325 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 HIST1H1BP16401 226 aaKnown RBP3.19□□□□□ -1.9
CD44-213ENST00000525209 CASP1P29466 404 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 CXCL5P42830 114 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 RAB5CP51148 216 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 ZNF80P51504 273 aaPredicted RBP3.19□□□□□ -1.9
CD44-213ENST00000525209 TMBIM6P55061 237 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 RBM11P57052 281 aaKnown RBP3.19□□□□□ -1.9
CD44-213ENST00000525209 MSMO1Q15800 293 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 SP6Q3SY56 376 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 BCL2L15Q5TBC7 163 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 FAM72AQ5TYM5 149 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 FAM72DQ6L9T8 149 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 FAM72BQ86X60 149 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 RNF175Q8N4F7 328 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 Q8N7P7 452 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 OR2T10Q8NGZ9 312 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 OR4A5Q8NH83 315 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 DCANP1Q8TF63 244 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 GTSF1Q8WW33 167 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 PP6455Q8WZ26 134 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 PYGO2Q9BRQ0 406 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 ZNF286AQ9HBT8 521 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 C8orf17Q9NRJ1 99 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 CBLN4Q9NTU7 201 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 ZNF581Q9P0T4 197 aa3.19□□□□□ -1.9
CD44-213ENST00000525209 RANBP2P49792 3224 aaKnown RBP3.19□□□□□ -1.9
CD44-213ENST00000525209 IGHV3-66A0A0C4DH42 116 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 SPAARA0A1B0GVQ0 90 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 SRRM5B3KS81 715 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 ZNF670-ZNF695F2Z2N8 137 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 H0YJW9 148 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 M0R378 163 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 SLC25A14O95258 325 aaPredicted RBP3.18□□□□□ -1.9
CD44-213ENST00000525209 IGLV1-44P01699 117 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 HIST1H2BOP23527 126 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 HIST1H2BBP33778 126 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 SDC2P34741 201 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 NMUP48645 174 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 NDUFA6P56556 154 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 HIST1H2BDP58876 126 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 HIST1H2BCP62807 126 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 CCL20P78556 96 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 KRTAP1-1Q07627 177 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 HIST2H2BEQ16778 126 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.18□□□□□ -1.9
CD44-213ENST00000525209 MMGT1Q8N4V1 131 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 OR5C1Q8NGR4 320 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 OR5H6Q8NGV6 325 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 PPTC7Q8NI37 304 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 C2orf15Q8WU43 125 aaKnown RBP3.18□□□□□ -1.9
CD44-213ENST00000525209 HIST1H2BHQ93079 126 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 RNASE6Q93091 150 aaKnown RBP3.18□□□□□ -1.9
CD44-213ENST00000525209 ZC2HC1AQ96GY0 325 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 HIST1H2BNQ99877 126 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 HIST1H2BMQ99879 126 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 SNHG12Q9BXW3 62 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 TMEM133Q9H2Q1 129 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 TCEAL2Q9H3H9 227 aaPredicted RBP3.18□□□□□ -1.9
CD44-213ENST00000525209 LHX9Q9NQ69 397 aa3.18□□□□□ -1.9
CD44-213ENST00000525209 SOX21Q9Y651 276 aaPredicted RBP3.18□□□□□ -1.9
CD44-213ENST00000525209 MYO5AQ9Y4I1 1855 aaKnown RBP3.18□□□□□ -1.9
CD44-213ENST00000525209 LAMA2P24043 3122 aaKnown RBP3.17□□□□□ -1.9
CD44-213ENST00000525209 MYH7BA7E2Y1 1941 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 IGHV7-4-1A0A0J9YVY3 117 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 A0A1B0GW54 56 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 ZNF860A6NHJ4 632 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 BMPR1BO00238 502 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 OR2T1O43869 369 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 HSPB1P04792 205 aaKnown RBP3.17□□□□□ -1.9
CD44-213ENST00000525209 AKAIN1P0CW23 69 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 PLA2G2AP14555 144 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 IL9P15248 144 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 ZNF32P17041 273 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 ATP6V0CP27449 155 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 PSMB8P28062 276 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 GUCA1AP43080 201 aaPredicted RBP3.17□□□□□ -1.9
CD44-213ENST00000525209 NUDT2P50583 147 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 ZNF136P52737 540 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 BSPH1Q075Z2 132 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 C11orf87Q6NUJ2 197 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 RPL22L1Q6P5R6 122 aaKnown RBP3.17□□□□□ -1.9
CD44-213ENST00000525209 TIFABQ6ZNK6 161 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 SLC25A42Q86VD7 318 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 C3orf22Q8N5N4 141 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 FER1L6-AS1Q8NA97 138 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 C20orf203Q8NBC4 194 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 OR4K13Q8NH42 304 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 MAGOHBQ96A72 148 aaKnown RBP3.17□□□□□ -1.9
CD44-213ENST00000525209 RMI2Q96E14 147 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 ZNF414Q96IQ9 312 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 OR4C12Q96R67 309 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 B9D2Q9BPU9 175 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 NAA38Q9BRA0 125 aaKnown RBP3.17□□□□□ -1.9
CD44-213ENST00000525209 HDHD3Q9BSH5 251 aaPredicted RBP3.17□□□□□ -1.9
CD44-213ENST00000525209 TSSK6Q9BXA6 273 aa3.17□□□□□ -1.9
CD44-213ENST00000525209 TMEM191AQ9H0A3 160 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms