RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 C20orf24Q9BUV8 137 aa9.35□□□□□ -0.91
SMCO4-202ENST00000525141 NMES1Q9C002 83 aa9.35□□□□□ -0.91
SMCO4-202ENST00000525141 SRD5A3Q9H8P0 318 aa9.35□□□□□ -0.91
SMCO4-202ENST00000525141 PAIP2BQ9ULR5 123 aaKnown RBP9.35□□□□□ -0.91
SMCO4-202ENST00000525141 PUS1Q9Y606 427 aaKnown RBP eCLIP9.35□□□□□ -0.91
SMCO4-202ENST00000525141 DNAH1Q9P2D7 4330 aa9.35□□□□□ -0.91
SMCO4-202ENST00000525141 LYSTQ99698 3801 aa9.35□□□□□ -0.91
SMCO4-202ENST00000525141 TRAV14DV4A0A0A6YYC5 116 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 TRAV25A0A0B4J276 109 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 PMS2P5A8MQ11 134 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 H3BP45 60 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 L7N2F9 121 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 GOSR2O14653 212 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 PVALBP20472 110 aaPredicted RBP9.34□□□□□ -0.91
SMCO4-202ENST00000525141 VAMP2P63027 116 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 RGS21Q2M5E4 152 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 TIGITQ495A1 244 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 Q8WTZ3 238 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 C11orf1Q9H5F2 150 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 ZFAND3Q9H8U3 227 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 SMPXQ9UHP9 88 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 LSM5Q9Y4Y9 91 aaKnown RBP9.34□□□□□ -0.91
SMCO4-202ENST00000525141 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
SMCO4-202ENST00000525141 IGHV3OR16-8A0A075B7F1 116 aa9.33□□□□□ -0.92
SMCO4-202ENST00000525141 IGHV7-4-1A0A0J9YVY3 117 aa9.33□□□□□ -0.92
SMCO4-202ENST00000525141 FNDC10F2Z333 226 aa9.33□□□□□ -0.92
SMCO4-202ENST00000525141 SIX6O95475 246 aa9.33□□□□□ -0.92
SMCO4-202ENST00000525141 RD3LP0DJH9 198 aa9.33□□□□□ -0.92
SMCO4-202ENST00000525141 RAB32Q13637 225 aa9.33□□□□□ -0.92
SMCO4-202ENST00000525141 ALG5Q9Y673 324 aa9.33□□□□□ -0.92
SMCO4-202ENST00000525141 ZFP92A6NM28 416 aa9.32□□□□□ -0.92
SMCO4-202ENST00000525141 ZNF207O43670 478 aaKnown RBP9.32□□□□□ -0.92
SMCO4-202ENST00000525141 TOMM40O96008 361 aa9.32□□□□□ -0.92
SMCO4-202ENST00000525141 RLN2P04090 185 aa9.32□□□□□ -0.92
SMCO4-202ENST00000525141 FABP1P07148 127 aa9.32□□□□□ -0.92
SMCO4-202ENST00000525141 METTL15P1P0C7V9 234 aa9.32□□□□□ -0.92
SMCO4-202ENST00000525141 H2BFSP57053 126 aa9.32□□□□□ -0.92
SMCO4-202ENST00000525141 DLK1P80370 383 aa9.32□□□□□ -0.92
SMCO4-202ENST00000525141 OXA1LQ15070 435 aa9.32□□□□□ -0.92
SMCO4-202ENST00000525141 OR8G2PQ6IF36 304 aa9.32□□□□□ -0.92
SMCO4-202ENST00000525141 THAP8Q8NA92 274 aa9.32□□□□□ -0.92
SMCO4-202ENST00000525141 OR10P1Q8NGE3 313 aa9.32□□□□□ -0.92
SMCO4-202ENST00000525141 TRGV9Q99603 122 aa9.32□□□□□ -0.92
SMCO4-202ENST00000525141 GGACTQ9BVM4 153 aa9.32□□□□□ -0.92
SMCO4-202ENST00000525141 RHPN1-AS1Q9BWJ2 59 aa9.32□□□□□ -0.92
SMCO4-202ENST00000525141 PLECQ15149 4684 aaKnown RBP9.32□□□□□ -0.92
SMCO4-202ENST00000525141 IGKV1D-37A0A075B6S9 117 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 IGKV1OR2-108A0A075B7D4 117 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 CHEK1O14757 476 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 DEDDO75618 318 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 CD5P06127 495 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 PSG1P11464 419 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 NPPCP23582 126 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 CRYBB3P26998 211 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 BMI1P35226 326 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 S100A10P60903 97 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 LINC01559Q495D7 138 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 LAMTOR1Q6IAA8 161 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 ACOT7LQ6ZUV0 252 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 TMEM144Q7Z5S9 345 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 OR51G1Q8NGK1 321 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 METTL26Q96S19 204 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 OVOL2Q9BRP0 275 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 VSIRQ9H7M9 311 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 NPVFQ9HCQ7 196 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 LYRM2Q9NU23 88 aaPredicted RBP9.31□□□□□ -0.92
SMCO4-202ENST00000525141 MGAT4CQ9UBM8 478 aa9.31□□□□□ -0.92
SMCO4-202ENST00000525141 LCE6AA0A183 80 aa9.3□□□□□ -0.92
SMCO4-202ENST00000525141 A0A1W2PS18 150 aa9.3□□□□□ -0.92
SMCO4-202ENST00000525141 E5RGE8 158 aa9.3□□□□□ -0.92
SMCO4-202ENST00000525141 TSPAN4O14817 238 aa9.3□□□□□ -0.92
SMCO4-202ENST00000525141 CFDP00746 253 aaPredicted RBP9.3□□□□□ -0.92
SMCO4-202ENST00000525141 BCAP31P51572 246 aa9.3□□□□□ -0.92
SMCO4-202ENST00000525141 CAV2P51636 162 aa9.3□□□□□ -0.92
SMCO4-202ENST00000525141 ZNF90Q03938 601 aa9.3□□□□□ -0.92
SMCO4-202ENST00000525141 RBPMS2Q6ZRY4 209 aaKnown RBP9.3□□□□□ -0.92
SMCO4-202ENST00000525141 LILRB2Q8N423 598 aa9.3□□□□□ -0.92
SMCO4-202ENST00000525141 TMEM231Q9H6L2 316 aa9.3□□□□□ -0.92
SMCO4-202ENST00000525141 FAM24AA6NFZ4 105 aa9.29□□□□□ -0.92
SMCO4-202ENST00000525141 CCNKO75909 580 aa9.29□□□□□ -0.92
SMCO4-202ENST00000525141 SULT1A1P50225 295 aa9.29□□□□□ -0.92
SMCO4-202ENST00000525141 AKR1C1Q04828 323 aa9.29□□□□□ -0.92
SMCO4-202ENST00000525141 ARL16Q0P5N6 197 aa9.29□□□□□ -0.92
SMCO4-202ENST00000525141 FAM90A2PQ658T7 463 aa9.29□□□□□ -0.92
SMCO4-202ENST00000525141 TMEM252Q8N6L7 170 aa9.29□□□□□ -0.92
SMCO4-202ENST00000525141 PPP1R1CQ8WVI7 109 aa9.29□□□□□ -0.92
SMCO4-202ENST00000525141 NARS2Q96I59 477 aaKnown RBP9.29□□□□□ -0.92
SMCO4-202ENST00000525141 RNF2Q99496 336 aa9.29□□□□□ -0.92
SMCO4-202ENST00000525141 MED28Q9H204 178 aa9.29□□□□□ -0.92
SMCO4-202ENST00000525141 UBQLN2Q9UHD9 624 aa9.29□□□□□ -0.92
SMCO4-202ENST00000525141 U3KQE9 123 aa9.29□□□□□ -0.92
SMCO4-202ENST00000525141 LOC102724200A0A096LPH7 203 aaPredicted RBP9.28□□□□□ -0.92
SMCO4-202ENST00000525141 H0YIZ8 118 aa9.28□□□□□ -0.92
SMCO4-202ENST00000525141 MPC2O95563 127 aa9.28□□□□□ -0.92
SMCO4-202ENST00000525141 APOHP02749 345 aaPredicted RBP9.28□□□□□ -0.92
SMCO4-202ENST00000525141 IL4P05112 153 aa9.28□□□□□ -0.92
SMCO4-202ENST00000525141 PET100P0DJ07 73 aa9.28□□□□□ -0.92
SMCO4-202ENST00000525141 CXCL3P19876 107 aa9.28□□□□□ -0.92
SMCO4-202ENST00000525141 S100A11P31949 105 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms