RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 M0QZK8 103 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 ST8SIA3O43173 380 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 CCNKO75909 580 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 SIX6O95475 246 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 TMEM50AO95807 157 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 PTTG1O95997 202 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 HRASP01112 189 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 IL5P05113 134 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 SERPINE2P07093 398 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 CTRB1P17538 263 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 HLA-GP17693 338 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 CXCL3P19876 107 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 VDAC1P21796 283 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 PSMB8P28062 276 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 VDAC2P45880 294 aaPredicted RBP2.21□□□□□ -2.06
CSDE1-208ENST00000524652 RPL27AP46776 148 aaKnown RBP2.21□□□□□ -2.06
CSDE1-208ENST00000524652 AKR1C2P52895 323 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 RPL8P62917 257 aaKnown RBP2.21□□□□□ -2.06
CSDE1-208ENST00000524652 IL15RAQ13261 267 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 SCGB2A2Q13296 93 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 FXYD3Q14802 87 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 PLGLAQ15195 96 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 TATDN3Q17R31 274 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 TRIM16LQ309B1 348 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 BSXQ3C1V8 233 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 VMA21Q3ZAQ7 101 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 CTRB2Q6GPI1 263 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 MZT2BQ6NZ67 158 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 UNQ5815/PRO19632Q6UWF5 114 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 ZNF562Q6V9R5 426 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 ZNF429Q86V71 674 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 ZNF695Q8IW36 515 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 MMD2Q8IY49 270 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 OR5T1Q8NG75 326 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 OR11H7Q8NGC8 314 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 OR8H1Q8NGG4 311 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 OR4D5Q8NGN0 318 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 OR4A5Q8NH83 315 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 GRPEL2Q8TAA5 225 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 MYOZ3Q8TDC0 251 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 CD300LFQ8TDQ1 290 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 ZNF431Q8TF32 576 aaPredicted RBP2.21□□□□□ -2.06
CSDE1-208ENST00000524652 CHPT1Q8WUD6 406 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 MITD1Q8WV92 249 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 IL22RA2Q969J5 263 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 LSM10Q969L4 123 aaKnown RBP2.21□□□□□ -2.06
CSDE1-208ENST00000524652 TSNAXQ99598 290 aaKnown RBP2.21□□□□□ -2.06
CSDE1-208ENST00000524652 CITED1Q99966 193 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 CITED2Q99967 270 aaPredicted RBP2.21□□□□□ -2.06
CSDE1-208ENST00000524652 C11orf1Q9H5F2 150 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 GNB4Q9HAV0 340 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 RAB18Q9NP72 206 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 NDUFA4L2Q9NRX3 87 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 MRPL36Q9P0J6 103 aaKnown RBP2.21□□□□□ -2.06
CSDE1-208ENST00000524652 SHPKQ9UHJ6 478 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 FOXA2Q9Y261 457 aaPredicted RBP2.21□□□□□ -2.06
CSDE1-208ENST00000524652 OR51B2Q9Y5P1 312 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 S4R3C0 116 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 CSMD3Q7Z407 3707 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 SORL1Q92673 2214 aa2.21□□□□□ -2.06
CSDE1-208ENST00000524652 IGLV11-55A0A075B6I3 123 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 TRAV14DV4A0A0A6YYC5 116 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 TRBV9A0A0B4J1U6 114 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 IGHV3-21A0A0B4J1V1 117 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 TRAV41A0A0B4J266 112 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 DUXBA0A1W2PPF3 345 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 PSMB11A5LHX3 300 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 MFSD2BA6NFX1 497 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 PRSS46E5RG02 174 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 I3L521 148 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 GOSR2O14653 212 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 B3GALNT1O75752 331 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 OR2J3O76001 311 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 SCGB1D1O95968 90 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 TRBV12-3P01733 135 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 IGHV3-48P01763 117 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 IGHV3-23P01764 117 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 IGHG4P01861 327 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 CRYBA1P05813 215 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 CRYGCP07315 174 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 TRAPPC2P0DI81 140 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 TRAPPC2BP0DI82 140 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 SULT1A3P0DMM9 295 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 SULT1A4P0DMN0 295 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 RNASE2P10153 161 aaKnown RBP2.2□□□□□ -2.06
CSDE1-208ENST00000524652 IAPPP10997 89 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 ANXA3P12429 323 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 MAS1LP35410 378 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 RAB9AP51151 201 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 H2BFSP57053 126 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 DEFA1P59665 94 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 DEFA3P59666 94 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 ERVK-16P61578 105 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 HSPE1P61604 102 aaKnown RBP2.2□□□□□ -2.06
CSDE1-208ENST00000524652 PRCDQ00LT1 54 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 TNFRSF9Q07011 255 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 CBX3Q13185 183 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 SMCO1Q147U7 214 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 RGS21Q2M5E4 152 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms