RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 RABAC1Q9UI14 185 aa12.73□□□□□ -0.37
CCNC-213ENST00000523541 K7EQG2 157 aa12.72□□□□□ -0.37
CCNC-213ENST00000523541 BUB3O43684 328 aa12.72□□□□□ -0.37
CCNC-213ENST00000523541 DHRS2Q13268 280 aa12.72□□□□□ -0.37
CCNC-213ENST00000523541 LYG2Q86SG7 212 aa12.72□□□□□ -0.37
CCNC-213ENST00000523541 CXorf65A6NEN9 183 aa12.71□□□□□ -0.37
CCNC-213ENST00000523541 ZFP92A6NM28 416 aa12.71□□□□□ -0.37
CCNC-213ENST00000523541 SNRPGP15A8MWD9 76 aa12.71□□□□□ -0.37
CCNC-213ENST00000523541 DEFB131AP59861 70 aa12.71□□□□□ -0.37
CCNC-213ENST00000523541 PMS2P11Q13670 270 aa12.71□□□□□ -0.37
CCNC-213ENST00000523541 TMEM41BQ5BJD5 291 aa12.71□□□□□ -0.37
CCNC-213ENST00000523541 TMEM217Q8N7C4 229 aa12.71□□□□□ -0.37
CCNC-213ENST00000523541 DCANP1Q8TF63 244 aa12.71□□□□□ -0.37
CCNC-213ENST00000523541 GLMPQ8WWB7 406 aa12.71□□□□□ -0.37
CCNC-213ENST00000523541 RNF125Q96EQ8 232 aa12.71□□□□□ -0.37
CCNC-213ENST00000523541 TRGV9Q99603 122 aa12.71□□□□□ -0.37
CCNC-213ENST00000523541 STARD9Q9P2P6 4700 aa12.71□□□□□ -0.38
CCNC-213ENST00000523541 A0A0J9YWU9 116 aa12.7□□□□□ -0.38
CCNC-213ENST00000523541 IAPPP10997 89 aa12.7□□□□□ -0.38
CCNC-213ENST00000523541 BTCP35070 178 aa12.7□□□□□ -0.38
CCNC-213ENST00000523541 USF2Q15853 346 aaPredicted RBP12.7□□□□□ -0.38
CCNC-213ENST00000523541 ZNF124Q15973 351 aa12.7□□□□□ -0.38
CCNC-213ENST00000523541 C4orf46Q504U0 113 aa12.7□□□□□ -0.38
CCNC-213ENST00000523541 C1orf194Q5T5A4 169 aa12.7□□□□□ -0.38
CCNC-213ENST00000523541 STXBP6Q8NFX7 210 aa12.7□□□□□ -0.38
CCNC-213ENST00000523541 CCDC32Q9BV29 185 aa12.7□□□□□ -0.38
CCNC-213ENST00000523541 FLVCR2Q9UPI3 526 aa12.7□□□□□ -0.38
CCNC-213ENST00000523541 STRAPQ9Y3F4 350 aaKnown RBP12.7□□□□□ -0.38
CCNC-213ENST00000523541 TENM2Q9NT68 2774 aa12.69□□□□□ -0.38
CCNC-213ENST00000523541 LINC00854A0A1B0GVQ3 168 aa12.69□□□□□ -0.38
CCNC-213ENST00000523541 WRBO00258 174 aa12.69□□□□□ -0.38
CCNC-213ENST00000523541 S100A7P31151 101 aa12.69□□□□□ -0.38
CCNC-213ENST00000523541 NKX2-1P43699 371 aaPredicted RBP12.69□□□□□ -0.38
CCNC-213ENST00000523541 STHQ8IWL8 128 aa12.69□□□□□ -0.38
CCNC-213ENST00000523541 THAP8Q8NA92 274 aa12.69□□□□□ -0.38
CCNC-213ENST00000523541 MITD1Q8WV92 249 aa12.69□□□□□ -0.38
CCNC-213ENST00000523541 FBXL17Q9UF56 701 aa12.69□□□□□ -0.38
CCNC-213ENST00000523541 SACSQ9NZJ4 4579 aa12.69□□□□□ -0.38
CCNC-213ENST00000523541 IGKV1D-37A0A075B6S9 117 aa12.68□□□□□ -0.38
CCNC-213ENST00000523541 PLA2G10O15496 165 aa12.68□□□□□ -0.38
CCNC-213ENST00000523541 LYRM1O43325 122 aa12.68□□□□□ -0.38
CCNC-213ENST00000523541 ADAP1O75689 374 aa12.68□□□□□ -0.38
CCNC-213ENST00000523541 SNRPD3P62318 126 aaKnown RBP12.68□□□□□ -0.38
CCNC-213ENST00000523541 MORN3Q6PF18 240 aaPredicted RBP12.68□□□□□ -0.38
CCNC-213ENST00000523541 SIGLEC15Q6ZMC9 328 aa12.68□□□□□ -0.38
CCNC-213ENST00000523541 SMIM8Q96KF7 97 aa12.68□□□□□ -0.38
CCNC-213ENST00000523541 MAGT1Q9H0U3 335 aa12.68□□□□□ -0.38
CCNC-213ENST00000523541 NRN1Q9NPD7 142 aa12.68□□□□□ -0.38
CCNC-213ENST00000523541 SLC45A2Q9UMX9 530 aa12.68□□□□□ -0.38
CCNC-213ENST00000523541 PRSS46E5RG02 174 aa12.67□□□□□ -0.38
CCNC-213ENST00000523541 ANXA7P20073 488 aaKnown RBP12.67□□□□□ -0.38
CCNC-213ENST00000523541 TAS2R30P59541 319 aa12.67□□□□□ -0.38
CCNC-213ENST00000523541 ZNF90Q03938 601 aa12.67□□□□□ -0.38
CCNC-213ENST00000523541 SPANXN5Q5MJ07 72 aa12.67□□□□□ -0.38
CCNC-213ENST00000523541 LEMD1Q68G75 181 aa12.67□□□□□ -0.38
CCNC-213ENST00000523541 OR4D5Q8NGN0 318 aa12.67□□□□□ -0.38
CCNC-213ENST00000523541 S100ZQ8WXG8 99 aa12.67□□□□□ -0.38
CCNC-213ENST00000523541 LYSTQ99698 3801 aa12.67□□□□□ -0.38
CCNC-213ENST00000523541 PAIP2BQ9ULR5 123 aaKnown RBP12.67□□□□□ -0.38
CCNC-213ENST00000523541 SPP1P10451 314 aa12.66□□□□□ -0.38
CCNC-213ENST00000523541 SAMD13Q5VXD3 122 aa12.66□□□□□ -0.38
CCNC-213ENST00000523541 FAM24BQ8N5W8 94 aa12.66□□□□□ -0.38
CCNC-213ENST00000523541 RAB40CQ96S21 281 aa12.66□□□□□ -0.38
CCNC-213ENST00000523541 RARRES2Q99969 163 aa12.66□□□□□ -0.38
CCNC-213ENST00000523541 CA1P00915 261 aaPredicted RBP12.65□□□□□ -0.38
CCNC-213ENST00000523541 TCRBP04435 133 aa12.65□□□□□ -0.38
CCNC-213ENST00000523541 POLR2GP62487 172 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCNC-213ENST00000523541 TMEM144Q7Z5S9 345 aa12.65□□□□□ -0.38
CCNC-213ENST00000523541 TRPT1Q86TN4 253 aaKnown RBP12.65□□□□□ -0.38
CCNC-213ENST00000523541 PBDC1Q9BVG4 233 aa12.65□□□□□ -0.38
CCNC-213ENST00000523541 C20orf85Q9H1P6 137 aa12.65□□□□□ -0.38
CCNC-213ENST00000523541 PSENENQ9NZ42 101 aa12.65□□□□□ -0.38
CCNC-213ENST00000523541 RYR2Q92736 4967 aa12.64□□□□□ -0.39
CCNC-213ENST00000523541 IGKV1OR2-108A0A075B7D4 117 aa12.64□□□□□ -0.39
CCNC-213ENST00000523541 FNDC10F2Z333 226 aa12.64□□□□□ -0.39
CCNC-213ENST00000523541 ZNF688P0C7X2 276 aa12.64□□□□□ -0.39
CCNC-213ENST00000523541 IAH1Q2TAA2 248 aaPredicted RBP12.64□□□□□ -0.39
CCNC-213ENST00000523541 ID1P41134 155 aa12.63□□□□□ -0.39
CCNC-213ENST00000523541 LYZP61626 148 aa12.63□□□□□ -0.39
CCNC-213ENST00000523541 NUTF2P61970 127 aaKnown RBP12.63□□□□□ -0.39
CCNC-213ENST00000523541 BPIFCQ8NFQ6 507 aa12.63□□□□□ -0.39
CCNC-213ENST00000523541 DNAH1Q9P2D7 4330 aa12.62□□□□□ -0.39
CCNC-213ENST00000523541 NUPR2A6NF83 97 aa12.62□□□□□ -0.39
CCNC-213ENST00000523541 TSC22D2O75157 780 aa12.62□□□□□ -0.39
CCNC-213ENST00000523541 SELENOTP62341 195 aa12.62□□□□□ -0.39
CCNC-213ENST00000523541 PSMG4Q5JS54 123 aa12.62□□□□□ -0.39
CCNC-213ENST00000523541 MZT2BQ6NZ67 158 aa12.62□□□□□ -0.39
CCNC-213ENST00000523541 TMEM14EPQ6UXP3 125 aa12.62□□□□□ -0.39
CCNC-213ENST00000523541 S100A7AQ86SG5 101 aa12.62□□□□□ -0.39
CCNC-213ENST00000523541 ZBTB8BQ8NAP8 495 aaPredicted RBP12.62□□□□□ -0.39
CCNC-213ENST00000523541 OR11H2Q8NH07 326 aa12.62□□□□□ -0.39
CCNC-213ENST00000523541 GPR82Q96P67 336 aa12.62□□□□□ -0.39
CCNC-213ENST00000523541 GGACTQ9BVM4 153 aa12.62□□□□□ -0.39
CCNC-213ENST00000523541 C11orf68Q9H3H3 251 aaKnown RBP12.62□□□□□ -0.39
CCNC-213ENST00000523541 NPVFQ9HCQ7 196 aa12.62□□□□□ -0.39
CCNC-213ENST00000523541 PMS2P5A8MQ11 134 aa12.61□□□□□ -0.39
CCNC-213ENST00000523541 SSSCA1O60232 199 aa12.61□□□□□ -0.39
CCNC-213ENST00000523541 MEOX2P50222 304 aa12.61□□□□□ -0.39
CCNC-213ENST00000523541 PAX9P55771 341 aa12.61□□□□□ -0.39
CCNC-213ENST00000523541 DLK1P80370 383 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms