RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 RD3LP0DJH9 198 aa13.24□□□□□ -0.29
CLK4-211ENST00000522556 ATP5IP56385 69 aaPredicted RBP13.24□□□□□ -0.29
CLK4-211ENST00000522556 C12orf45Q8N5I9 185 aaPredicted RBP13.24□□□□□ -0.29
CLK4-211ENST00000522556 STPG3Q8N7X2 389 aa13.24□□□□□ -0.29
CLK4-211ENST00000522556 ENKURQ8TC29 256 aa13.24□□□□□ -0.29
CLK4-211ENST00000522556 MS4A6AQ9H2W1 248 aa13.24□□□□□ -0.29
CLK4-211ENST00000522556 ZMAT4Q9H898 229 aa13.24□□□□□ -0.29
CLK4-211ENST00000522556 MAP6D1Q9H9H5 199 aa13.24□□□□□ -0.29
CLK4-211ENST00000522556 PSENENQ9NZ42 101 aa13.24□□□□□ -0.29
CLK4-211ENST00000522556 STRAPQ9Y3F4 350 aaKnown RBP13.24□□□□□ -0.29
CLK4-211ENST00000522556 SCGB2A1O75556 95 aa13.23□□□□□ -0.29
CLK4-211ENST00000522556 HNRNPCP07910 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLK4-211ENST00000522556 TMEM182Q6ZP80 229 aaPredicted RBP13.23□□□□□ -0.29
CLK4-211ENST00000522556 GLMPQ8WWB7 406 aa13.23□□□□□ -0.29
CLK4-211ENST00000522556 SPATA25Q9BR10 227 aa13.23□□□□□ -0.29
CLK4-211ENST00000522556 METTL15P1P0C7V9 234 aa13.22□□□□□ -0.29
CLK4-211ENST00000522556 GATA2P23769 480 aaPredicted RBP13.22□□□□□ -0.29
CLK4-211ENST00000522556 RPL11P62913 178 aaKnown RBP13.22□□□□□ -0.29
CLK4-211ENST00000522556 ARL16Q0P5N6 197 aa13.22□□□□□ -0.29
CLK4-211ENST00000522556 OR8G2PQ6IF36 304 aa13.22□□□□□ -0.29
CLK4-211ENST00000522556 THAP8Q8NA92 274 aa13.22□□□□□ -0.29
CLK4-211ENST00000522556 RNF125Q96EQ8 232 aa13.22□□□□□ -0.29
CLK4-211ENST00000522556 SMIM8Q96KF7 97 aa13.22□□□□□ -0.29
CLK4-211ENST00000522556 PBDC1Q9BVG4 233 aa13.22□□□□□ -0.29
CLK4-211ENST00000522556 GGTLC1Q9BX51 225 aa13.22□□□□□ -0.29
CLK4-211ENST00000522556 RPL35AP18077 110 aaKnown RBP13.21□□□□□ -0.29
CLK4-211ENST00000522556 LYZP61626 148 aa13.21□□□□□ -0.29
CLK4-211ENST00000522556 RRAS2P62070 204 aaPredicted RBP13.21□□□□□ -0.29
CLK4-211ENST00000522556 C16orf54Q6UWD8 224 aa13.21□□□□□ -0.29
CLK4-211ENST00000522556 TMEM14EPQ6UXP3 125 aa13.21□□□□□ -0.29
CLK4-211ENST00000522556 STXBP6Q8NFX7 210 aa13.21□□□□□ -0.29
CLK4-211ENST00000522556 TRGV9Q99603 122 aa13.21□□□□□ -0.29
CLK4-211ENST00000522556 C11orf1Q9H5F2 150 aa13.21□□□□□ -0.29
CLK4-211ENST00000522556 RABAC1Q9UI14 185 aa13.21□□□□□ -0.29
CLK4-211ENST00000522556 LSM5Q9Y4Y9 91 aaKnown RBP13.21□□□□□ -0.29
CLK4-211ENST00000522556 NBEAL2Q6ZNJ1 2754 aa13.21□□□□□ -0.29
CLK4-211ENST00000522556 LOC102724200A0A096LPH7 203 aaPredicted RBP13.2□□□□□ -0.3
CLK4-211ENST00000522556 C7orf66A4D0T2 115 aa13.2□□□□□ -0.3
CLK4-211ENST00000522556 C5orf51A6NDU8 294 aa13.2□□□□□ -0.3
CLK4-211ENST00000522556 K7EPK0 472 aa13.2□□□□□ -0.3
CLK4-211ENST00000522556 IL5P05113 134 aa13.2□□□□□ -0.3
CLK4-211ENST00000522556 BMI1P35226 326 aa13.2□□□□□ -0.3
CLK4-211ENST00000522556 RPP30P78346 268 aaKnown RBP13.2□□□□□ -0.3
CLK4-211ENST00000522556 AKR1C1Q04828 323 aa13.2□□□□□ -0.3
CLK4-211ENST00000522556 LEMD1Q68G75 181 aa13.2□□□□□ -0.3
CLK4-211ENST00000522556 TMEM231Q9H6L2 316 aa13.2□□□□□ -0.3
CLK4-211ENST00000522556 AGRNO00468 2067 aa13.19□□□□□ -0.3
CLK4-211ENST00000522556 A0A1W2PS18 150 aa13.19□□□□□ -0.3
CLK4-211ENST00000522556 K7EQG2 157 aa13.19□□□□□ -0.3
CLK4-211ENST00000522556 BUB3O43684 328 aa13.19□□□□□ -0.3
CLK4-211ENST00000522556 DEFB131AP59861 70 aa13.19□□□□□ -0.3
CLK4-211ENST00000522556 DCANP1Q8TF63 244 aa13.19□□□□□ -0.3
CLK4-211ENST00000522556 RAB40CQ96S21 281 aa13.19□□□□□ -0.3
CLK4-211ENST00000522556 EDA2RQ9HAV5 297 aa13.19□□□□□ -0.3
CLK4-211ENST00000522556 SMCO3A2RU48 225 aa13.18□□□□□ -0.3
CLK4-211ENST00000522556 DNASE2O00115 360 aaPredicted RBP13.18□□□□□ -0.3
CLK4-211ENST00000522556 SIX6O95475 246 aa13.18□□□□□ -0.3
CLK4-211ENST00000522556 IL15RAQ13261 267 aa13.18□□□□□ -0.3
CLK4-211ENST00000522556 C2orf50Q96LR7 162 aa13.18□□□□□ -0.3
CLK4-211ENST00000522556 INMT-MINDY4F8WBC2 141 aa13.17□□□□□ -0.3
CLK4-211ENST00000522556 TSC22D2O75157 780 aa13.17□□□□□ -0.3
CLK4-211ENST00000522556 ZNF688P0C7X2 276 aa13.17□□□□□ -0.3
CLK4-211ENST00000522556 EIF2B2P49770 351 aaKnown RBP13.17□□□□□ -0.3
CLK4-211ENST00000522556 GRAMD2BQ96HH9 432 aa13.17□□□□□ -0.3
CLK4-211ENST00000522556 NARS2Q96I59 477 aaKnown RBP13.17□□□□□ -0.3
CLK4-211ENST00000522556 FAM24AA6NFZ4 105 aa13.16□□□□□ -0.3
CLK4-211ENST00000522556 TAS2R30P59541 319 aa13.16□□□□□ -0.3
CLK4-211ENST00000522556 S100A10P60903 97 aa13.16□□□□□ -0.3
CLK4-211ENST00000522556 PAFAH1B2P68402 229 aa13.16□□□□□ -0.3
CLK4-211ENST00000522556 RAB32Q13637 225 aa13.16□□□□□ -0.3
CLK4-211ENST00000522556 DEFB135Q30KP9 77 aa13.16□□□□□ -0.3
CLK4-211ENST00000522556 TMEM144Q7Z5S9 345 aa13.16□□□□□ -0.3
CLK4-211ENST00000522556 OVOL2Q9BRP0 275 aa13.16□□□□□ -0.3
CLK4-211ENST00000522556 TRAV2A0A0B4J234 112 aa13.15□□□□□ -0.3
CLK4-211ENST00000522556 KNCNA6PVL3 124 aa13.15□□□□□ -0.3
CLK4-211ENST00000522556 SNRPGP15A8MWD9 76 aa13.15□□□□□ -0.3
CLK4-211ENST00000522556 GOSR2O14653 212 aa13.15□□□□□ -0.3
CLK4-211ENST00000522556 CD5P06127 495 aa13.15□□□□□ -0.3
CLK4-211ENST00000522556 DLK1P80370 383 aa13.15□□□□□ -0.3
CLK4-211ENST00000522556 SIGLEC15Q6ZMC9 328 aa13.15□□□□□ -0.3
CLK4-211ENST00000522556 MARVELD1Q9BSK0 173 aa13.15□□□□□ -0.3
CLK4-211ENST00000522556 DOK5Q9P104 306 aa13.15□□□□□ -0.3
CLK4-211ENST00000522556 L7N2F9 121 aa13.14□□□□□ -0.31
CLK4-211ENST00000522556 DEFB1P60022 68 aa13.14□□□□□ -0.31
CLK4-211ENST00000522556 VAMP2P63027 116 aa13.14□□□□□ -0.31
CLK4-211ENST00000522556 SLC38A11Q08AI6 406 aa13.14□□□□□ -0.31
CLK4-211ENST00000522556 CYP2G1PQ6ZSU1 146 aa13.14□□□□□ -0.31
CLK4-211ENST00000522556 OR10P1Q8NGE3 313 aa13.14□□□□□ -0.31
CLK4-211ENST00000522556 IGSF23A1L1A6 192 aa13.13□□□□□ -0.31
CLK4-211ENST00000522556 HELTA6NFD8 242 aa13.13□□□□□ -0.31
CLK4-211ENST00000522556 CST7O76096 145 aa13.13□□□□□ -0.31
CLK4-211ENST00000522556 MUC7Q8TAX7 377 aa13.13□□□□□ -0.31
CLK4-211ENST00000522556 C17orf77Q96MU5 243 aa13.13□□□□□ -0.31
CLK4-211ENST00000522556 GPN1Q9HCN4 374 aaPredicted RBP13.13□□□□□ -0.31
CLK4-211ENST00000522556 FABP1P07148 127 aa13.12□□□□□ -0.31
CLK4-211ENST00000522556 ORM2P19652 201 aa13.12□□□□□ -0.31
CLK4-211ENST00000522556 BCAP31P51572 246 aa13.12□□□□□ -0.31
CLK4-211ENST00000522556 CAV2P51636 162 aa13.12□□□□□ -0.31
CLK4-211ENST00000522556 APOC4P55056 127 aa13.12□□□□□ -0.31
CLK4-211ENST00000522556 DEFA1P59665 94 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms