RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 GSX1Q9H4S2 264 aaPredicted RBP7.4□□□□□ -1.22
SHPRH-209ENST00000521977 ZNF355PQ9NSJ1 428 aa7.4□□□□□ -1.22
SHPRH-209ENST00000521977 SERTAD4Q9NUC0 356 aa7.4□□□□□ -1.22
SHPRH-209ENST00000521977 BAHCC1Q9P281 2608 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 HIVEP2P31629 2446 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 RAB19A4D1S5 217 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 INAFM1C9JVW0 142 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 GNG7O60262 68 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 TOMM40O96008 361 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 TRGV3P03979 118 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 CTSGP08311 255 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 OR5G3P0C626 314 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 PSG1P11464 419 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 CDC34P49427 236 aaPredicted RBP7.39□□□□□ -1.23
SHPRH-209ENST00000521977 ATP5G2Q06055 141 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 PMS2P11Q13670 270 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 PATE2Q6UY27 113 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 GATAD1Q8WUU5 269 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 SFT2D1Q8WV19 159 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 TMEM37Q8WXS4 190 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 RAB24Q969Q5 203 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 MARC2Q969Z3 335 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 CCDC140Q96MF4 163 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 MS4A10Q96PG2 267 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 SCRT1Q9BWW7 348 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 SLC25A22Q9H936 323 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 GAR1Q9NY12 217 aaKnown RBP7.39□□□□□ -1.23
SHPRH-209ENST00000521977 S4R3C0 116 aa7.39□□□□□ -1.23
SHPRH-209ENST00000521977 KRTAP9-6A0A140TA67 174 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 A0A1W2PPV4 95 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 WI2-2373I1.2A0A1W2PRP0 233 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 MAP1LC3B2A6NCE7 125 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 CYSRT1A8MQ03 144 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 TEX46H3BTG2 121 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 OR2C1O95371 312 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 IGHV3-23P01764 117 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 FABP1P07148 127 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 STAG3L2P0CL84 134 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 STAG3L3P0CL85 134 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 RAB9AP51151 201 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 TPPP2P59282 170 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 RHOBP62745 196 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 CCL20P78556 96 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 KIAA0141Q14154 515 aaPredicted RBP7.38□□□□□ -1.23
SHPRH-209ENST00000521977 Q56UQ5 140 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 LCN15Q6UWW0 184 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 Q6ZSV7 163 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 RNF152Q8N8N0 203 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 OR1L4Q8NGR5 311 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 MYOZ3Q8TDC0 251 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 PFDN5Q99471 154 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 RNF2Q99496 336 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 MRPL32Q9BYC8 188 aaKnown RBP7.38□□□□□ -1.23
SHPRH-209ENST00000521977 MAP1LC3BQ9GZQ8 125 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 KLK15Q9H2R5 256 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 SEPSECSQ9HD40 501 aaKnown RBP7.38□□□□□ -1.23
SHPRH-209ENST00000521977 DNAJC4Q9NNZ3 241 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 FUT9Q9Y231 359 aa7.38□□□□□ -1.23
SHPRH-209ENST00000521977 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.37□□□□□ -1.23
SHPRH-209ENST00000521977 A0A0G2JLM5 398 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 OR2T8A6NH00 312 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 ATP6V1G1O75348 118 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 SCGB2A1O75556 95 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 CLEC3BP05452 202 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 ELANEP08246 267 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 RD3LP0DJH9 198 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 PF4V1P10720 104 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 ADMP35318 185 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 SLC35B1P78383 322 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 FOXE3Q13461 319 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 FAM78BQ5VT40 261 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 SPATA31B1PQ5VZV4 182 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 ZNF343Q6P1L6 599 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 UQCC3Q6UW78 93 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 C10orf99Q6UWK7 81 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 ZNF491Q8N8L2 437 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 OR51G1Q8NGK1 321 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 WIPF2Q8TF74 440 aaPredicted RBP7.37□□□□□ -1.23
SHPRH-209ENST00000521977 FAM210AQ96ND0 272 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 JMJD8Q96S16 334 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 CHRDL1Q9BU40 450 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 C16orf95Q9H693 158 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 MRPL27Q9P0M9 148 aaKnown RBP7.37□□□□□ -1.23
SHPRH-209ENST00000521977 HIVEP1P15822 2718 aa7.37□□□□□ -1.23
SHPRH-209ENST00000521977 FLNBO75369 2602 aaKnown RBP7.37□□□□□ -1.23
SHPRH-209ENST00000521977 NUPL2O15504 423 aaKnown RBP7.36□□□□□ -1.23
SHPRH-209ENST00000521977 TGOLN2O43493 480 aa7.36□□□□□ -1.23
SHPRH-209ENST00000521977 COX7A2P2O60397 106 aa7.36□□□□□ -1.23
SHPRH-209ENST00000521977 HYPMO75409 117 aa7.36□□□□□ -1.23
SHPRH-209ENST00000521977 CRLF1O75462 422 aa7.36□□□□□ -1.23
SHPRH-209ENST00000521977 EIF3GO75821 320 aaKnown RBP eCLIP7.36□□□□□ -1.23
SHPRH-209ENST00000521977 CD5P06127 495 aa7.36□□□□□ -1.23
SHPRH-209ENST00000521977 GPR183P32249 361 aa7.36□□□□□ -1.23
SHPRH-209ENST00000521977 FGF8P55075 233 aaPredicted RBP7.36□□□□□ -1.23
SHPRH-209ENST00000521977 C10orf113Q5VZT2 155 aa7.36□□□□□ -1.23
SHPRH-209ENST00000521977 TEX38Q6PEX7 206 aa7.36□□□□□ -1.23
SHPRH-209ENST00000521977 CLEC19AQ6UXS0 136 aa7.36□□□□□ -1.23
SHPRH-209ENST00000521977 ZNF600Q6ZNG1 722 aa7.36□□□□□ -1.23
SHPRH-209ENST00000521977 Q71RC1 249 aaPredicted RBP7.36□□□□□ -1.23
SHPRH-209ENST00000521977 MIR17HGQ75NE6 70 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms