RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 IGHV3-66A0A0C4DH42 116 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 K7EIM0 57 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 DNASE2O00115 360 aaPredicted RBP4.18□□□□□ -1.74
PABPC1-216ENST00000520868 KRASP01116 189 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 IGHV3-48P01763 117 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 HLA-DMBP28068 263 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 LPAR6P43657 344 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 AQP4P55087 323 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 DSCR10P59022 87 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 DEFB131AP59861 70 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 PAFAH1B2P68402 229 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 MSMO1Q15800 293 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 POU2AF1Q16633 256 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 LEMD1Q68G75 181 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 TCF24Q7RTU0 167 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 TMEM17Q86X19 198 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 GIMAP1Q8WWP7 306 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 LSM10Q969L4 123 aaKnown RBP4.18□□□□□ -1.74
PABPC1-216ENST00000520868 SLC25A46Q96AG3 418 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 ZNF414Q96IQ9 312 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 NDUFA4L2Q9NRX3 87 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 DAPK2Q9UIK4 370 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 RRP15Q9Y3B9 282 aaKnown RBP4.18□□□□□ -1.74
PABPC1-216ENST00000520868 OR51B2Q9Y5P1 312 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 F11RQ9Y624 299 aaKnown RBP4.18□□□□□ -1.74
PABPC1-216ENST00000520868 MEIS3P1A6NDR6 274 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 C11orf94C9JXX5 98 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 M0R2N4 97 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 NUPL2O15504 423 aaKnown RBP4.17□□□□□ -1.74
PABPC1-216ENST00000520868 ST8SIA3O43173 380 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 SNAPC5O75971 98 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 SCGNO76038 276 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 DFFBO76075 338 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 EIF4EP06730 217 aaKnown RBP4.17□□□□□ -1.74
PABPC1-216ENST00000520868 RBMY1A1P0DJD3 496 aaKnown RBP4.17□□□□□ -1.74
PABPC1-216ENST00000520868 RBMY1CP0DJD4 496 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 G6PCP35575 357 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 ERVK-16P61578 105 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 RBMY1FQ15415 496 aaKnown RBP4.17□□□□□ -1.74
PABPC1-216ENST00000520868 THOC7Q6I9Y2 204 aaKnown RBP4.17□□□□□ -1.74
PABPC1-216ENST00000520868 LINC00336Q6ZUF6 198 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 HSD17B13Q7Z5P4 300 aaPredicted RBP4.17□□□□□ -1.74
PABPC1-216ENST00000520868 HOGA1Q86XE5 327 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 CENPSQ8N2Z9 138 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 FAM24BQ8N5W8 94 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 MAPKAPK5-AS1Q8N8E1 139 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 OR5AP2Q8NGF4 316 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 OR5H6Q8NGV6 325 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 LGALS14Q8TCE9 139 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 DGCR14Q96DF8 476 aaKnown RBP4.17□□□□□ -1.74
PABPC1-216ENST00000520868 TMEM56Q96MV1 263 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 ATP6V0BQ99437 205 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 MS4A6AQ9H2W1 248 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 NDUFB11Q9NX14 153 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 RHBDL2Q9NX52 303 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 COMMD9Q9P000 198 aa4.17□□□□□ -1.74
PABPC1-216ENST00000520868 TRAV10A0A0B4J240 114 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 C15orf61A6NNL5 157 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 ANKRD65E5RJM6 399 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 I3L2K1 104 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 PGLYRP1O75594 196 aaPredicted RBP4.16□□□□□ -1.74
PABPC1-216ENST00000520868 MT-CO2P00403 227 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 RLN1P04808 185 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 F2RP25116 425 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 GNRHRP30968 328 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 MXD1Q05195 221 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 SFXN4Q6P4A7 337 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 TOMM20LQ6UXN7 152 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 ZNF767PQ75MW2 155 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 TPRA1Q86W33 373 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 STHQ8IWL8 128 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 Q8NAQ8 132 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 TSPAN14Q8NG11 270 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 OR1P1Q8NH06 330 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 PINX1Q96BK5 328 aaKnown RBP4.16□□□□□ -1.74
PABPC1-216ENST00000520868 OR10C1Q96KK4 312 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 CNBD2Q96M20 576 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 NXF2Q9GZY0 626 aaKnown RBP4.16□□□□□ -1.74
PABPC1-216ENST00000520868 AUNIPQ9H7T9 357 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 TXNL4BQ9NX01 149 aaKnown RBP4.16□□□□□ -1.74
PABPC1-216ENST00000520868 CLEC5AQ9NY25 188 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 RABAC1Q9UI14 185 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 DNAH5Q8TE73 4624 aa4.16□□□□□ -1.74
PABPC1-216ENST00000520868 APOBP04114 4563 aaKnown RBP4.16□□□□□ -1.74
PABPC1-216ENST00000520868 DEFB131BA0A096LNP1 70 aa4.15□□□□□ -1.75
PABPC1-216ENST00000520868 KNCNA6PVL3 124 aa4.15□□□□□ -1.75
PABPC1-216ENST00000520868 RTL8CO15255 209 aa4.15□□□□□ -1.75
PABPC1-216ENST00000520868 GNG7O60262 68 aa4.15□□□□□ -1.75
PABPC1-216ENST00000520868 PMP2P02689 132 aa4.15□□□□□ -1.75
PABPC1-216ENST00000520868 GIG44P09565 113 aaPredicted RBP4.15□□□□□ -1.75
PABPC1-216ENST00000520868 PSMB9P28065 219 aa4.15□□□□□ -1.75
PABPC1-216ENST00000520868 SDC2P34741 201 aa4.15□□□□□ -1.75
PABPC1-216ENST00000520868 SPINK9Q5DT21 86 aa4.15□□□□□ -1.75
PABPC1-216ENST00000520868 IDNKQ5T6J7 187 aa4.15□□□□□ -1.75
PABPC1-216ENST00000520868 PVRIGQ6DKI7 326 aa4.15□□□□□ -1.75
PABPC1-216ENST00000520868 POM121L12Q8N7R1 296 aa4.15□□□□□ -1.75
PABPC1-216ENST00000520868 DUSP18Q8NEJ0 188 aa4.15□□□□□ -1.75
PABPC1-216ENST00000520868 STXBP6Q8NFX7 210 aa4.15□□□□□ -1.75
PABPC1-216ENST00000520868 OR4A16Q8NH70 328 aa4.15□□□□□ -1.75
PABPC1-216ENST00000520868 MOB3AQ96BX8 217 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms