RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 GOLT1AQ6ZVE7 132 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 SFT2D1Q8WV19 159 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 SLAMF6Q96DU3 332 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 PRADC1Q9BSG0 188 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 IMUPQ9GZP8 106 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 TLNRD1Q9H1K6 362 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 BCL2L10Q9HD36 194 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 KLK9Q9UKQ9 250 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 ARL5AQ9Y689 179 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 U3KQ87 197 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 DOCK3Q8IZD9 2030 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 RTL1A6NKG5 1358 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 TRGV10A0A0A0MS01 117 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 TRBV6-7A0A0A0MS04 114 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 OR2T1O43869 369 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 OR1I1O60431 355 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 HYPMO75409 117 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 GADD45GO95257 159 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 IFNA7P01567 189 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 MIFP14174 115 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 ATP5G3P48201 142 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 NCALDP61601 193 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 HSPE1P61604 102 aaKnown RBP0.72□□□□□ -2.29
SKP1-207ENST00000520417 GNG5P63218 68 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 RHOGP84095 191 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 TSNQ15631 228 aaKnown RBP0.72□□□□□ -2.29
SKP1-207ENST00000520417 ESRGQ1W209 222 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 RRN3P1Q2M238 152 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 AKR1C8PQ5T2L2 129 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 BCL2L15Q5TBC7 163 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 EIF5AL1Q6IS14 154 aaKnown RBP0.72□□□□□ -2.29
SKP1-207ENST00000520417 OR2T10Q8NGZ9 312 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 YPEL2Q96QA6 119 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 PAIP2Q9BPZ3 127 aaKnown RBP0.72□□□□□ -2.29
SKP1-207ENST00000520417 CCDC94Q9BW85 323 aaPredicted RBP0.72□□□□□ -2.29
SKP1-207ENST00000520417 FBN2P35556 2912 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 RIC1Q4ADV7 1423 aa0.72□□□□□ -2.29
SKP1-207ENST00000520417 TRBV19A0A075B6N1 114 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 TRBV6-8A0A0A6YYG3 113 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 CCDC160A6NGH7 325 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 C2orf70A6NJV1 201 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 G3V2T6 193 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 C19orf84I3L1E1 186 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 AIPO00170 330 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 TAX1BP3O14907 124 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 BANF1O75531 89 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 ARF6P62330 175 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 CNBPP62633 177 aaKnown RBP0.71□□□□□ -2.3
SKP1-207ENST00000520417 DYNLT1P63172 113 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 MYL5Q02045 173 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 PDZD9Q8IXQ8 264 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 SLC30A7Q8NEW0 376 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 OR10J5Q8NHC4 309 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 TEX47Q8TBZ9 253 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 AP3S1Q92572 193 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 ADAT3Q96EY9 351 aaPredicted RBP0.71□□□□□ -2.3
SKP1-207ENST00000520417 PBDC1Q9BVG4 233 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 ARMC1Q9NVT9 282 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 MED29Q9NX70 200 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 STOML2Q9UJZ1 356 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 PYCARDQ9ULZ3 195 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 CACNA1BQ00975 2339 aa0.71□□□□□ -2.3
SKP1-207ENST00000520417 NCOA6Q14686 2063 aaPredicted RBP0.71□□□□□ -2.3
SKP1-207ENST00000520417 SCN8AQ9UQD0 1980 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 ROS1P08922 2347 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 ZNF106Q9H2Y7 1883 aaKnown RBP0.7□□□□□ -2.3
SKP1-207ENST00000520417 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.7□□□□□ -2.3
SKP1-207ENST00000520417 TRAV12-1A0A0B4J245 112 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 TRAV4A0A0B4J268 109 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 DUXBA0A1W2PPF3 345 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 H7C1C5 153 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 NDUFB3O43676 98 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 TIMM17BO60830 172 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 LYZL6O75951 148 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 NEFHP12036 1026 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 NFYBP25208 207 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 HOXA6P31267 233 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 PHBP35232 272 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 PPP1R2P41236 205 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 LCN6P62502 163 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 RPL19P84098 196 aaKnown RBP0.7□□□□□ -2.3
SKP1-207ENST00000520417 PDE6HQ13956 83 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 SNCBQ16143 134 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 SCGB2B2Q4G0G5 96 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 TMED4Q7Z7H5 227 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 IFT20Q8IY31 132 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 LINC00301Q8NCQ3 95 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 PXT1Q8NFP0 134 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 OR4K15Q8NH41 348 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 ZNF418Q8TF45 676 aaPredicted RBP0.7□□□□□ -2.3
SKP1-207ENST00000520417 C4orf3Q8WVX3 66 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 GPER1Q99527 375 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 SLC25A21Q9BQT8 299 aaPredicted RBP0.7□□□□□ -2.3
SKP1-207ENST00000520417 RASL12Q9NYN1 266 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 SSR3Q9UNL2 185 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 HS3ST2Q9Y278 367 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 SCN3AQ9NY46 2000 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 PIK3C2GO75747 1445 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 EML6Q6ZMW3 1958 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 HECW2Q9P2P5 1572 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms