RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 GLMPQ8WWB7 406 aa11.79□□□□□ -0.52
IGHV3-42-201ENST00000520410 RNF125Q96EQ8 232 aa11.79□□□□□ -0.52
IGHV3-42-201ENST00000520410 IGHV4-28A0A0C4DH34 117 aa11.78□□□□□ -0.52
IGHV3-42-201ENST00000520410 FABP1P07148 127 aa11.78□□□□□ -0.52
IGHV3-42-201ENST00000520410 NUP62P37198 522 aaPredicted RBP11.78□□□□□ -0.52
IGHV3-42-201ENST00000520410 OR2F1Q13607 317 aa11.78□□□□□ -0.52
IGHV3-42-201ENST00000520410 TMEM41BQ5BJD5 291 aa11.78□□□□□ -0.52
IGHV3-42-201ENST00000520410 NRN1Q9NPD7 142 aa11.78□□□□□ -0.52
IGHV3-42-201ENST00000520410 FAM90A26D6RGX4 464 aa11.77□□□□□ -0.53
IGHV3-42-201ENST00000520410 IGKV3-20P01619 116 aa11.77□□□□□ -0.53
IGHV3-42-201ENST00000520410 HOXB5P09067 269 aa11.77□□□□□ -0.53
IGHV3-42-201ENST00000520410 NUTF2P61970 127 aaKnown RBP11.77□□□□□ -0.53
IGHV3-42-201ENST00000520410 TMEM128Q5BJH2 165 aa11.77□□□□□ -0.53
IGHV3-42-201ENST00000520410 COQ8AQ8NI60 647 aa11.77□□□□□ -0.53
IGHV3-42-201ENST00000520410 C2CD4CQ8TF44 421 aa11.77□□□□□ -0.53
IGHV3-42-201ENST00000520410 LINC00052Q96N35 136 aa11.77□□□□□ -0.53
IGHV3-42-201ENST00000520410 RAB40CQ96S21 281 aa11.77□□□□□ -0.53
IGHV3-42-201ENST00000520410 LYSTQ99698 3801 aa11.77□□□□□ -0.53
IGHV3-42-201ENST00000520410 DUXBA0A1W2PPF3 345 aa11.76□□□□□ -0.53
IGHV3-42-201ENST00000520410 IGLL5B9A064 214 aa11.76□□□□□ -0.53
IGHV3-42-201ENST00000520410 MED6O75586 246 aa11.76□□□□□ -0.53
IGHV3-42-201ENST00000520410 DEDDO75618 318 aa11.76□□□□□ -0.53
IGHV3-42-201ENST00000520410 RPP30P78346 268 aaKnown RBP11.76□□□□□ -0.53
IGHV3-42-201ENST00000520410 ZNF90Q03938 601 aa11.76□□□□□ -0.53
IGHV3-42-201ENST00000520410 TRIM63Q969Q1 353 aa11.76□□□□□ -0.53
IGHV3-42-201ENST00000520410 MAGT1Q9H0U3 335 aa11.76□□□□□ -0.53
IGHV3-42-201ENST00000520410 TBC1D24Q9ULP9 559 aa11.76□□□□□ -0.53
IGHV3-42-201ENST00000520410 U3KQE9 123 aa11.76□□□□□ -0.53
IGHV3-42-201ENST00000520410 ALMS1Q8TCU4 4167 aa11.75□□□□□ -0.53
IGHV3-42-201ENST00000520410 WRBO00258 174 aa11.75□□□□□ -0.53
IGHV3-42-201ENST00000520410 BUB3O43684 328 aa11.75□□□□□ -0.53
IGHV3-42-201ENST00000520410 MIFP14174 115 aa11.75□□□□□ -0.53
IGHV3-42-201ENST00000520410 GAMTQ14353 236 aa11.75□□□□□ -0.53
IGHV3-42-201ENST00000520410 TRIQKQ629K1 86 aa11.75□□□□□ -0.53
IGHV3-42-201ENST00000520410 RPP25LQ8N5L8 163 aaKnown RBP11.75□□□□□ -0.53
IGHV3-42-201ENST00000520410 SOSTQ9BQB4 213 aa11.75□□□□□ -0.53
IGHV3-42-201ENST00000520410 XCL2Q9UBD3 114 aa11.75□□□□□ -0.53
IGHV3-42-201ENST00000520410 V9GYH0 126 aa11.75□□□□□ -0.53
IGHV3-42-201ENST00000520410 IGHV3OR16-12A0A075B7B8 117 aa11.74□□□□□ -0.53
IGHV3-42-201ENST00000520410 LINC00854A0A1B0GVQ3 168 aa11.74□□□□□ -0.53
IGHV3-42-201ENST00000520410 SFT2D2O95562 160 aa11.74□□□□□ -0.53
IGHV3-42-201ENST00000520410 GPX4P36969 197 aaPredicted RBP11.74□□□□□ -0.53
IGHV3-42-201ENST00000520410 ID1P41134 155 aa11.74□□□□□ -0.53
IGHV3-42-201ENST00000520410 FXYD7P58549 80 aa11.74□□□□□ -0.53
IGHV3-42-201ENST00000520410 AKR1C1Q04828 323 aa11.74□□□□□ -0.53
IGHV3-42-201ENST00000520410 PPP1R1AQ13522 171 aa11.74□□□□□ -0.53
IGHV3-42-201ENST00000520410 SPANXN2Q5MJ10 180 aa11.74□□□□□ -0.53
IGHV3-42-201ENST00000520410 OR8G2PQ6IF36 304 aa11.74□□□□□ -0.53
IGHV3-42-201ENST00000520410 Q8NAQ8 132 aa11.74□□□□□ -0.53
IGHV3-42-201ENST00000520410 SLC25A21Q9BQT8 299 aaPredicted RBP11.74□□□□□ -0.53
IGHV3-42-201ENST00000520410 C1QTNF4Q9BXJ3 329 aa11.74□□□□□ -0.53
IGHV3-42-201ENST00000520410 SMCO3A2RU48 225 aa11.73□□□□□ -0.53
IGHV3-42-201ENST00000520410 SNRPGP15A8MWD9 76 aa11.73□□□□□ -0.53
IGHV3-42-201ENST00000520410 H3BP45 60 aa11.73□□□□□ -0.53
IGHV3-42-201ENST00000520410 HLA-DMBP28068 263 aa11.73□□□□□ -0.53
IGHV3-42-201ENST00000520410 ATP5IP56385 69 aaPredicted RBP11.73□□□□□ -0.53
IGHV3-42-201ENST00000520410 ZNF79Q15937 498 aa11.73□□□□□ -0.53
IGHV3-42-201ENST00000520410 SPANXN5Q5MJ07 72 aa11.73□□□□□ -0.53
IGHV3-42-201ENST00000520410 GSG1LQ6UXU4 331 aa11.73□□□□□ -0.53
IGHV3-42-201ENST00000520410 OR8I2Q8N0Y5 310 aa11.73□□□□□ -0.53
IGHV3-42-201ENST00000520410 OR4B1Q8NGF8 309 aa11.73□□□□□ -0.53
IGHV3-42-201ENST00000520410 CIB3Q96Q77 187 aaPredicted RBP11.73□□□□□ -0.53
IGHV3-42-201ENST00000520410 SLC25A22Q9H936 323 aa11.73□□□□□ -0.53
IGHV3-42-201ENST00000520410 TMED3Q9Y3Q3 217 aa11.73□□□□□ -0.53
IGHV3-42-201ENST00000520410 DNAH1Q9P2D7 4330 aa11.72□□□□□ -0.53
IGHV3-42-201ENST00000520410 C11orf94C9JXX5 98 aa11.72□□□□□ -0.53
IGHV3-42-201ENST00000520410 SYNGR2O43760 224 aa11.72□□□□□ -0.53
IGHV3-42-201ENST00000520410 RBMY1A1P0DJD3 496 aaKnown RBP11.72□□□□□ -0.53
IGHV3-42-201ENST00000520410 RBMY1CP0DJD4 496 aa11.72□□□□□ -0.53
IGHV3-42-201ENST00000520410 RBMY1FQ15415 496 aaKnown RBP11.72□□□□□ -0.53
IGHV3-42-201ENST00000520410 LGALS9CQ6DKI2 356 aa11.72□□□□□ -0.53
IGHV3-42-201ENST00000520410 ZNF767PQ75MW2 155 aa11.72□□□□□ -0.53
IGHV3-42-201ENST00000520410 GIG44P09565 113 aaPredicted RBP11.71□□□□□ -0.53
IGHV3-42-201ENST00000520410 EMP1P54849 157 aa11.71□□□□□ -0.53
IGHV3-42-201ENST00000520410 DEFB1P60022 68 aa11.71□□□□□ -0.53
IGHV3-42-201ENST00000520410 GGNBP1Q5YKI7 109 aa11.71□□□□□ -0.53
IGHV3-42-201ENST00000520410 Q6ZTC4 211 aa11.71□□□□□ -0.53
IGHV3-42-201ENST00000520410 X6R8D5 127 aa11.71□□□□□ -0.53
IGHV3-42-201ENST00000520410 HYDINQ4G0P3 5121 aa11.7□□□□□ -0.54
IGHV3-42-201ENST00000520410 IGKV1D-37A0A075B6S9 117 aa11.7□□□□□ -0.54
IGHV3-42-201ENST00000520410 TRAV10A0A0B4J240 114 aa11.7□□□□□ -0.54
IGHV3-42-201ENST00000520410 ZNF705EA8MWA4 302 aaPredicted RBP11.7□□□□□ -0.54
IGHV3-42-201ENST00000520410 H3BMM0 161 aa11.7□□□□□ -0.54
IGHV3-42-201ENST00000520410 PITX3O75364 302 aa11.7□□□□□ -0.54
IGHV3-42-201ENST00000520410 SCGB1D2O95969 90 aa11.7□□□□□ -0.54
IGHV3-42-201ENST00000520410 ORM2P19652 201 aa11.7□□□□□ -0.54
IGHV3-42-201ENST00000520410 NKX2-1P43699 371 aaPredicted RBP11.7□□□□□ -0.54
IGHV3-42-201ENST00000520410 TRGV9Q99603 122 aa11.7□□□□□ -0.54
IGHV3-42-201ENST00000520410 WDR12Q9GZL7 423 aaKnown RBP11.7□□□□□ -0.54
IGHV3-42-201ENST00000520410 STRAPQ9Y3F4 350 aaKnown RBP11.7□□□□□ -0.54
IGHV3-42-201ENST00000520410 ELOA3CA0A087WX78 387 aaPredicted RBP11.69□□□□□ -0.54
IGHV3-42-201ENST00000520410 IFNA21P01568 189 aa11.69□□□□□ -0.54
IGHV3-42-201ENST00000520410 SLC25A6P12236 298 aa11.69□□□□□ -0.54
IGHV3-42-201ENST00000520410 HLA-DRB4P13762 266 aa11.69□□□□□ -0.54
IGHV3-42-201ENST00000520410 PSMB3P49720 205 aa11.69□□□□□ -0.54
IGHV3-42-201ENST00000520410 GDF5OSQ5U4N7 250 aa11.69□□□□□ -0.54
IGHV3-42-201ENST00000520410 EBLN2Q6P2I7 272 aa11.69□□□□□ -0.54
IGHV3-42-201ENST00000520410 CCDC190Q86UF4 302 aa11.69□□□□□ -0.54
IGHV3-42-201ENST00000520410 LRTM2Q8N967 370 aa11.69□□□□□ -0.54
IGHV3-42-201ENST00000520410 BPIFCQ8NFQ6 507 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms