RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 IGHV3-72A0A0B4J1Y9 119 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 TRAV41A0A0B4J266 112 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 IGKV1-6A0A0C4DH72 117 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 C3orf85A0A1B0GTC6 90 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 A0A1W2PN81 502 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 TCRBV4S1A1TA0A5B7 111 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 ZNF705GA8MUZ8 300 aaPredicted RBP4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 H0Y980 276 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 TMEM250H0YL14 139 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 SLC25A17O43808 307 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 KBTBD11O94819 623 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 IFNA5P01569 189 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 IGF1P05019 195 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 RPLP1P05386 114 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 CT45A6P0DMU7 189 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 CT45A5P0DMU8 189 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 CT45A7P0DMV0 189 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 DEFA4P12838 97 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 ZNF25P17030 456 aaPredicted RBP4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 MDKP21741 143 aaPredicted RBP4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 OR10J1P30954 320 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 CHRNA7P36544 502 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 ZNF134P52741 427 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 SUB1P53999 127 aaKnown RBP eCLIP4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 RAB11AP62491 216 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 RANP62826 216 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 GNB1P62873 340 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 RPL8P62917 257 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 SERF2P84101 59 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 TMEM241Q24JQ0 296 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 PHLDA2Q53GA4 152 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 NMSQ5H8A3 153 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 H2BFWTQ7Z2G1 175 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 ZNF695Q8IW36 515 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 GBGT1Q8N5D6 347 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 Q8N6K4 173 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 OR5AU1Q8NGC0 362 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 OR51G1Q8NGK1 321 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 OR5B3Q8NH48 314 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 OR51H1Q8NH63 302 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 OR4A16Q8NH70 328 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 PINX1Q96BK5 328 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 OR5B12Q96R08 314 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 RAB40CQ96S21 281 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 ZNF355PQ9NSJ1 428 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 BET1LQ9NYM9 111 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 GNG13Q9P2W3 67 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 FOXA2Q9Y261 457 aaPredicted RBP4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 TIMM9Q9Y5J7 89 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 KIAA2026Q5HYC2 2103 aa4.48□□□□□ -1.69
CTNNA1-220ENST00000520260 ARHGAP32A7KAX9 2087 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 H7BYZ3 331 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 CORTO00230 105 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 PAX4O43316 350 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 CHST1O43916 411 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 TMEM50AO95807 157 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 CD24P25063 80 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 G0S2P27469 103 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 GNRHRP30968 328 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 S100A7P31151 101 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 GALR1P47211 349 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 CEBPGP53567 150 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 PAX9P55771 341 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 PROK1P58294 105 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 RPP30P78346 268 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 FXYD3Q14802 87 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 PSG5Q15238 335 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 TNXAQ16473 311 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 BSXQ3C1V8 233 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 DYNAPQ8N1N2 210 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 Q8N9W7 124 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 PIFOQ8TCI5 191 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 SCGB1C1Q8TD33 95 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 USMG5Q96IX5 58 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 TP53RKQ96S44 253 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 TMEM208Q9BTX3 173 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 ZNF702PQ9H963 129 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 CCL28Q9NRJ3 127 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 RPRMQ9NS64 109 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 NAGKQ9UJ70 344 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 SIGLEC9Q9Y336 463 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 RFNGQ9Y644 331 aa4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 ZNF469Q96JG9 3925 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-220ENST00000520260 MXRA5Q9NR99 2828 aa4.46□□□□□ -1.69
CTNNA1-220ENST00000520260 FAM223BA6NKX1 122 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 TNFSF12O43508 249 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 SSSCA1O60232 199 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 PGLYRP1O75594 196 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 CST7O76096 145 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 CA2P00918 260 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 IGKV1-16P04430 117 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 ESDP10768 282 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 BMI1P35226 326 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 RPL27AP46776 148 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 CRIP2P52943 208 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 RPL23P62829 140 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 CX3CL1P78423 397 aa4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 ERHP84090 104 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-220ENST00000520260 RUNX1Q01196 453 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms