RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 PRR20AP86496 221 aa16.61■□□□□ 0.25
PTP4A3-203ENST00000520105 SLC39A9Q9NUM3 307 aa16.61■□□□□ 0.25
PTP4A3-203ENST00000520105 ATRQ13535 2644 aa16.6■□□□□ 0.25
PTP4A3-203ENST00000520105 NUPL2O15504 423 aaKnown RBP16.6■□□□□ 0.25
PTP4A3-203ENST00000520105 PSG1P11464 419 aa16.6■□□□□ 0.25
PTP4A3-203ENST00000520105 SERF2P84101 59 aa16.6■□□□□ 0.25
PTP4A3-203ENST00000520105 GCSAMLQ5JQS6 135 aa16.6■□□□□ 0.25
PTP4A3-203ENST00000520105 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.59■□□□□ 0.25
PTP4A3-203ENST00000520105 TGOLN2O43493 480 aa16.59■□□□□ 0.25
PTP4A3-203ENST00000520105 YIF1AO95070 293 aa16.59■□□□□ 0.25
PTP4A3-203ENST00000520105 TSPAN15O95858 294 aa16.59■□□□□ 0.25
PTP4A3-203ENST00000520105 ZNF616Q08AN1 781 aa16.59■□□□□ 0.25
PTP4A3-203ENST00000520105 UBE2E2Q96LR5 201 aa16.59■□□□□ 0.25
PTP4A3-203ENST00000520105 GAR1Q9NY12 217 aaKnown RBP16.59■□□□□ 0.25
PTP4A3-203ENST00000520105 RD3LP0DJH9 198 aa16.59■□□□□ 0.25
PTP4A3-203ENST00000520105 CD28P10747 220 aa16.59■□□□□ 0.25
PTP4A3-203ENST00000520105 FHITP49789 147 aa16.59■□□□□ 0.25
PTP4A3-203ENST00000520105 SELENOTP62341 195 aa16.59■□□□□ 0.25
PTP4A3-203ENST00000520105 C18orf65Q6ZTR6 163 aa16.59■□□□□ 0.25
PTP4A3-203ENST00000520105 RAB2AP61019 212 aa16.58■□□□□ 0.24
PTP4A3-203ENST00000520105 KHDC1LQ5JSQ8 128 aa16.58■□□□□ 0.24
PTP4A3-203ENST00000520105 PRIMA1Q86XR5 153 aa16.58■□□□□ 0.24
PTP4A3-203ENST00000520105 ARL3P36405 182 aa16.57■□□□□ 0.24
PTP4A3-203ENST00000520105 SULT1A2P50226 295 aa16.57■□□□□ 0.24
PTP4A3-203ENST00000520105 YPEL3P61236 119 aaPredicted RBP16.57■□□□□ 0.24
PTP4A3-203ENST00000520105 AKR1C8PQ5T2L2 129 aa16.57■□□□□ 0.24
PTP4A3-203ENST00000520105 ZNF414Q96IQ9 312 aa16.57■□□□□ 0.24
PTP4A3-203ENST00000520105 ATP6V0BQ99437 205 aa16.57■□□□□ 0.24
PTP4A3-203ENST00000520105 KCNIP2Q9NS61 270 aa16.57■□□□□ 0.24
PTP4A3-203ENST00000520105 RPRMQ9NS64 109 aa16.57■□□□□ 0.24
PTP4A3-203ENST00000520105 TOMM40O96008 361 aa16.56■□□□□ 0.24
PTP4A3-203ENST00000520105 Q6ZRG5 221 aa16.56■□□□□ 0.24
PTP4A3-203ENST00000520105 PEF1Q9UBV8 284 aaKnown RBP16.56■□□□□ 0.24
PTP4A3-203ENST00000520105 SPSB3Q6PJ21 355 aa16.56■□□□□ 0.24
PTP4A3-203ENST00000520105 DOK5Q9P104 306 aa16.56■□□□□ 0.24
PTP4A3-203ENST00000520105 SCGB2A1O75556 95 aa16.55■□□□□ 0.24
PTP4A3-203ENST00000520105 CDX1P47902 265 aaPredicted RBP16.55■□□□□ 0.24
PTP4A3-203ENST00000520105 Q8WTZ3 238 aa16.55■□□□□ 0.24
PTP4A3-203ENST00000520105 RNF141Q8WVD5 230 aa16.55■□□□□ 0.24
PTP4A3-203ENST00000520105 PUS1Q9Y606 427 aaKnown RBP eCLIP16.55■□□□□ 0.24
PTP4A3-203ENST00000520105 IGHV3OR16-8A0A075B7F1 116 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 UMAD1C9J7I0 102 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 BMPR1BO00238 502 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 EIF3GO75821 320 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 OR2C1O95371 312 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 FABP1P07148 127 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 LGALS1P09382 135 aaKnown RBP16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 ORM2P19652 201 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 KRTAP10-3P60369 221 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 ACOT6Q3I5F7 207 aaPredicted RBP16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 TMEM41BQ5BJD5 291 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 RPP25LQ8N5L8 163 aaKnown RBP16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 OR51G1Q8NGK1 321 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 OR10G4Q8NGN3 311 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 OR10G9Q8NGN4 311 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 OR10G7Q8NGN6 311 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 CITED2Q99967 270 aaPredicted RBP16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 LYZP61626 148 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 PATE2Q6UY27 113 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 ZNF600Q6ZNG1 722 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 OR1B1Q8NGR6 318 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 FAM213BQ8TBF2 198 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 TMEM37Q8WXS4 190 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 PBDC1Q9BVG4 233 aa16.54■□□□□ 0.24
PTP4A3-203ENST00000520105 IL4P05112 153 aa16.53■□□□□ 0.24
PTP4A3-203ENST00000520105 A0A1B0GUS0 222 aa16.52■□□□□ 0.24
PTP4A3-203ENST00000520105 ZNF705EA8MWA4 302 aaPredicted RBP16.52■□□□□ 0.24
PTP4A3-203ENST00000520105 MBP02144 154 aa16.52■□□□□ 0.24
PTP4A3-203ENST00000520105 FOXL1Q12952 345 aa16.52■□□□□ 0.24
PTP4A3-203ENST00000520105 TOMM20LQ6UXN7 152 aa16.52■□□□□ 0.24
PTP4A3-203ENST00000520105 DNAJC4Q9NNZ3 241 aa16.52■□□□□ 0.24
PTP4A3-203ENST00000520105 FBN1P35555 2871 aaKnown RBP16.52■□□□□ 0.24
PTP4A3-203ENST00000520105 TENM1Q9UKZ4 2725 aa16.52■□□□□ 0.23
PTP4A3-203ENST00000520105 WI2-2373I1.2A0A1W2PRP0 233 aa16.52■□□□□ 0.23
PTP4A3-203ENST00000520105 A0A1W2PRX2 142 aa16.52■□□□□ 0.23
PTP4A3-203ENST00000520105 OR5G3P0C626 314 aa16.52■□□□□ 0.23
PTP4A3-203ENST00000520105 RAB5CP51148 216 aa16.52■□□□□ 0.23
PTP4A3-203ENST00000520105 DEFB136Q30KP8 78 aa16.52■□□□□ 0.23
PTP4A3-203ENST00000520105 KRTAP24-1Q3LI83 254 aa16.52■□□□□ 0.23
PTP4A3-203ENST00000520105 FAM122CQ6P4D5 195 aa16.52■□□□□ 0.23
PTP4A3-203ENST00000520105 UQCC3Q6UW78 93 aa16.52■□□□□ 0.23
PTP4A3-203ENST00000520105 KLHL30-AS1Q8NEE0 82 aa16.52■□□□□ 0.23
PTP4A3-203ENST00000520105 RCC1LQ96I51 464 aaKnown RBP16.52■□□□□ 0.23
PTP4A3-203ENST00000520105 UHRF2Q96PU4 802 aa16.52■□□□□ 0.23
PTP4A3-203ENST00000520105 SEPSECSQ9HD40 501 aaKnown RBP16.52■□□□□ 0.23
PTP4A3-203ENST00000520105 GGCTO75223 188 aaKnown RBP16.51■□□□□ 0.23
PTP4A3-203ENST00000520105 RELQ04864 619 aaPredicted RBP16.51■□□□□ 0.23
PTP4A3-203ENST00000520105 ZNF726P1Q15940 193 aa16.51■□□□□ 0.23
PTP4A3-203ENST00000520105 FAM209BQ5JX69 171 aa16.51■□□□□ 0.23
PTP4A3-203ENST00000520105 SSX7Q7RTT5 188 aa16.51■□□□□ 0.23
PTP4A3-203ENST00000520105 C4orf3Q8WVX3 66 aa16.51■□□□□ 0.23
PTP4A3-203ENST00000520105 RNF125Q96EQ8 232 aa16.51■□□□□ 0.23
PTP4A3-203ENST00000520105 IGHV4OR15-8A0A075B7B6 117 aa16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 A0A087WW49 117 aa16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 COX7A2P2O60397 106 aa16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 PLP1P60201 277 aa16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 USF2Q15853 346 aaPredicted RBP16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 SPATA31B1PQ5VZV4 182 aa16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 SLC25A22Q9H936 323 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms