RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 HSD17B11Q8NBQ5 300 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 GATAD1Q8WUU5 269 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 FANCD2OSQ96PS1 177 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 DUX3Q96PT4 197 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 TXNDC17Q9BRA2 123 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 KLK15Q9H2R5 256 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 TRBV7-1A0A0A6YYK4 115 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 A0A0G2JLM5 398 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 ZNF705EA8MWA4 302 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-206ENST00000519115 AGPAT2O15120 278 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 CLN5O75503 358 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 MT-CO2P00403 227 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 ELANEP08246 267 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 MYOD1P15172 320 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 FGF7P21781 194 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 S100A1P23297 94 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 PSMB8P28062 276 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 PPIFP30405 207 aaKnown RBP5.88□□□□□ -1.47
SDCBP-206ENST00000519115 MFAP4P55083 255 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 SPINK9Q5DT21 86 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 C10orf55Q5SWW7 151 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 ASPHD1Q5U4P2 390 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 SPSB3Q6PJ21 355 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 RNF152Q8N8N0 203 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 STXBP6Q8NFX7 210 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 OR1L4Q8NGR5 311 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 MARC2Q969Z3 335 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 OR5B12Q96R08 314 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 PFDN5Q99471 154 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 GGTLC1Q9BX51 225 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 ACTR3CQ9C0K3 210 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-206ENST00000519115 FNDC4Q9H6D8 234 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-206ENST00000519115 PFDN2Q9UHV9 154 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 ARL2-SNX15V9GYD0 113 aa5.88□□□□□ -1.47
SDCBP-206ENST00000519115 CTXND1A0A1B0GTU2 59 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 UBE2L5PA0A1B0GUS4 154 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 G3V4G9 280 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 K7EIM0 57 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 IGLV1-40P01703 118 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 PRH1P02810 166 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 H2AFB1P0C5Y9 115 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 LINC00869P0C866 280 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 CD33P20138 364 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 MFAP2P55001 183 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 RHOBP62745 196 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 DEFA5Q01523 94 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 AKR1C1Q04828 323 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 RPP25LQ8N5L8 163 aaKnown RBP5.87□□□□□ -1.47
SDCBP-206ENST00000519115 BPIFCQ8NFQ6 507 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 OR5T1Q8NG75 326 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 MYOZ3Q8TDC0 251 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 NPIPB3Q92617 1050 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 MS4A10Q96PG2 267 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 MGST2Q99735 147 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 GNB4Q9HAV0 340 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 DNAJC4Q9NNZ3 241 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 RPRMQ9NS64 109 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 SLC39A9Q9NUM3 307 aa5.87□□□□□ -1.47
SDCBP-206ENST00000519115 IGKV1OR2-108A0A075B7D4 117 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 SMCO3A2RU48 225 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 CCL24O00175 119 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 NDUFB8O95169 186 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 OR2C1O95371 312 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 TRGV3P03979 118 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 CDX1P47902 265 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-206ENST00000519115 PSMB3P49720 205 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 RAB9AP51151 201 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 TPPP2P59282 170 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 B2MP61769 119 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 KIAA0141Q14154 515 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-206ENST00000519115 FFAR4Q5NUL3 377 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 CYP2G1PQ6ZSU1 146 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 LINC00482Q8N8I6 264 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 ZNF491Q8N8L2 437 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 OR10G4Q8NGN3 311 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 OR10G9Q8NGN4 311 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 OR10G7Q8NGN6 311 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 C4orf3Q8WVX3 66 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 MISP3Q96FF7 219 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 RAX2Q96IS3 184 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 RSG1Q9BU20 258 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 PBDC1Q9BVG4 233 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 MRPL32Q9BYC8 188 aaKnown RBP5.86□□□□□ -1.47
SDCBP-206ENST00000519115 NKX6-2Q9C056 277 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-206ENST00000519115 SH3BGRL3Q9H299 93 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 ZNF355PQ9NSJ1 428 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 C21orf62Q9NYP8 219 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 DMRT1Q9Y5R6 373 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 PXMP4Q9Y6I8 212 aa5.86□□□□□ -1.47
SDCBP-206ENST00000519115 CMYA5Q8N3K9 4069 aa5.85□□□□□ -1.47
SDCBP-206ENST00000519115 IGKV1D-37A0A075B6S9 117 aa5.85□□□□□ -1.47
SDCBP-206ENST00000519115 A0A1W2PPV4 95 aa5.85□□□□□ -1.47
SDCBP-206ENST00000519115 MFSD2BA6NFX1 497 aa5.85□□□□□ -1.47
SDCBP-206ENST00000519115 ZFP92A6NM28 416 aa5.85□□□□□ -1.47
SDCBP-206ENST00000519115 KRBOX1C9JBD0 128 aa5.85□□□□□ -1.47
SDCBP-206ENST00000519115 TOMM40O96008 361 aa5.85□□□□□ -1.47
SDCBP-206ENST00000519115 IGHV3-11P01762 117 aa5.85□□□□□ -1.47
SDCBP-206ENST00000519115 CD5P06127 495 aa5.85□□□□□ -1.47
SDCBP-206ENST00000519115 OR5G3P0C626 314 aa5.85□□□□□ -1.47
SDCBP-206ENST00000519115 IGLC1P0CG04 106 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms