RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 ETV1P50549 477 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 Q56UQ5 140 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 C19orf35Q6ZS72 473 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 LINC00518Q8N0U6 118 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 GDPD1Q8N9F7 314 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 UBAC2Q8NBM4 344 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 CSNK1G2-AS1Q8NCQ2 148 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 ZNRF2Q8NHG8 242 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 ZNF414Q96IQ9 312 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 HSD17B10Q99714 261 aaKnown RBP4.27□□□□□ -1.73
CCDC6-203ENST00000518638 COMMD5Q9GZQ3 224 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 MS4A6AQ9H2W1 248 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 BABAM2Q9NXR7 383 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 BET1LQ9NYM9 111 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 IGLC7A0M8Q6 106 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 TMEM14DPA8MWL7 114 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 E7EUB6 86 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 WRBO00258 174 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 IFNA5P01569 189 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 CD3GP09693 182 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 CFC1BP0CG36 223 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 CFC1P0CG37 223 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 DNAL1Q4LDG9 190 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 OGFRL1Q5TC84 451 aaPredicted RBP4.26□□□□□ -1.73
CCDC6-203ENST00000518638 UBE2UQ5VVX9 321 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 STPG4Q8N801 248 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 OR52I1Q8NGK6 324 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 OR4D5Q8NGN0 318 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 NARS2Q96I59 477 aaKnown RBP4.26□□□□□ -1.73
CCDC6-203ENST00000518638 DERL3Q96Q80 235 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 HDHD3Q9BSH5 251 aaPredicted RBP4.26□□□□□ -1.73
CCDC6-203ENST00000518638 SCRT1Q9BWW7 348 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 HRASLSQ9HDD0 168 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 RABAC1Q9UI14 185 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 RPH3ALQ9UNE2 315 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 RFNGQ9Y644 331 aa4.26□□□□□ -1.73
CCDC6-203ENST00000518638 IGHV3OR16-8A0A075B7F1 116 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 SMIM1B2RUZ4 78 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 SOCS1O15524 211 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 WBP4O75554 376 aaKnown RBP4.25□□□□□ -1.73
CCDC6-203ENST00000518638 SERPINE2P07093 398 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 FCGR3AP08637 254 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 CTXN2P0C2S0 81 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 LIMS3P0CW19 117 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 LIMS4P0CW20 117 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 HTN3P15516 51 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 OR2B8PP59922 312 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 DAD1P61803 113 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 RPS11P62280 158 aaKnown RBP eCLIP4.25□□□□□ -1.73
CCDC6-203ENST00000518638 TIMM50Q3ZCQ8 353 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 RBM48Q5RL73 367 aaKnown RBP4.25□□□□□ -1.73
CCDC6-203ENST00000518638 C1orf100Q5SVJ3 147 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 XAF1Q6GPH4 301 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 OR10K2Q6IF99 312 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 ZNF773Q6PK81 442 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 ZNF705AQ6ZN79 300 aaPredicted RBP4.25□□□□□ -1.73
CCDC6-203ENST00000518638 VKORC1L1Q8N0U8 176 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 TCTEX1D2Q8WW35 142 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 FCAMRQ8WWV6 532 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 PGLYRP3Q96LB9 341 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 LPAR5Q9H1C0 372 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 Q9H3A6 140 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 VSIRQ9H7M9 311 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 FGF20Q9NP95 211 aaPredicted RBP4.25□□□□□ -1.73
CCDC6-203ENST00000518638 MED4Q9NPJ6 270 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 CLEC5AQ9NY25 188 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 POMPQ9Y244 141 aa4.25□□□□□ -1.73
CCDC6-203ENST00000518638 RBMX2Q9Y388 322 aaKnown RBP4.25□□□□□ -1.73
CCDC6-203ENST00000518638 F11RQ9Y624 299 aaKnown RBP4.25□□□□□ -1.73
CCDC6-203ENST00000518638 DNAH5Q8TE73 4624 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 IGHV3-49A0A0A0MS15 119 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 ZNF705FA8MVS1 300 aaPredicted RBP4.24□□□□□ -1.73
CCDC6-203ENST00000518638 K7EQG2 157 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 RBFOX2O43251 390 aaKnown RBP eCLIP4.24□□□□□ -1.73
CCDC6-203ENST00000518638 CTSGP08311 255 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 ZNF705DP0CH99 300 aaPredicted RBP4.24□□□□□ -1.73
CCDC6-203ENST00000518638 ZNF705BP0CI00 300 aaPredicted RBP4.24□□□□□ -1.73
CCDC6-203ENST00000518638 TRAPPC2P0DI81 140 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 TRAPPC2BP0DI82 140 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 OR13C7P0DN81 318 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 GADD45AP24522 165 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 EMP1P54849 157 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 XGP55808 180 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 TAS2R31P59538 309 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 ARPC4P59998 168 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 SNRPD3P62318 126 aaKnown RBP4.24□□□□□ -1.73
CCDC6-203ENST00000518638 QRFPP83859 136 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 ST3GAL4Q11206 333 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 UNC119Q13432 240 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 CLINT1Q14677 625 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 OR2B11Q5JQS5 317 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 ACTL10Q5JWF8 245 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 SPANXN2Q5MJ10 180 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 FAM222AQ5U5X8 452 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 Q6ZS49 121 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 H1FOOQ8IZA3 346 aaPredicted RBP4.24□□□□□ -1.73
CCDC6-203ENST00000518638 STXBP6Q8NFX7 210 aa4.24□□□□□ -1.73
CCDC6-203ENST00000518638 LSM10Q969L4 123 aaKnown RBP4.24□□□□□ -1.73
CCDC6-203ENST00000518638 CENPNQ96H22 339 aaPredicted RBP4.24□□□□□ -1.73
CCDC6-203ENST00000518638 ARHGAP5-AS1Q96IT6 56 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms