RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 SPIN2BQ9BPZ2 258 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 NKX6-2Q9C056 277 aaPredicted RBP2.14□□□□□ -2.07
VPS13B-207ENST00000518569 GTSF1LQ9H1H1 148 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 FBXL12Q9NXK8 326 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 TAAR3PQ9P1P4 343 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 TNFSF18Q9UNG2 199 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 MUC3AQ02505 3323 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 ROBO3Q96MS0 1386 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 DNAH12Q6ZR08 3092 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 LOC102725191A0A1B0GVB3 256 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 A0A1B0GW54 56 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 DPRXA6NFQ7 191 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 TLCD2A6NGC4 264 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 GGT3PA6NGU5 568 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF705GA8MUZ8 300 aaPredicted RBP2.13□□□□□ -2.07
VPS13B-207ENST00000518569 GGTLC3B5MD39 225 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 INS-IGF2F8WCM5 200 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 I3L521 148 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 M0R1X1 148 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 LGALS9O00182 355 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 UBFD1O14562 309 aaKnown RBP2.13□□□□□ -2.07
VPS13B-207ENST00000518569 CDC42EP2O14613 210 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 FFAR1O14842 300 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 HLA-DPB1P04440 258 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 P0DMU3 169 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 FAM231AP0DMU4 169 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 FAM231CP0DMU5 169 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 CCL1P22362 96 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 IMPA1P29218 277 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 SDC2P34741 201 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 OPRM1P35372 400 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 OPRK1P41145 380 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 CA7P43166 264 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 CXCL12P48061 93 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF83P51522 516 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 TPPP2P59282 170 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 FKBP1AP62942 108 aaKnown RBP2.13□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF181Q2M3W8 571 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 ORMDL2Q53FV1 153 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 LINC00483Q53H64 154 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 GLYATL3Q5SZD4 288 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 NCMAPQ5T1S8 102 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 AMMECR1LQ6DCA0 310 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 SSX8Q7RTT4 187 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 TRAPPC6BQ86SZ2 158 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 PRR15Q8IV56 129 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 C1orf174Q8IYL3 243 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 C4orf33Q8N1A6 199 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 DRAM1Q8N682 238 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 ZIC4Q8N9L1 334 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 OR2M3Q8NG83 312 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 OR4C16Q8NGL9 310 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 LCN9Q8WX39 176 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 RMI2Q96E14 147 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 TRIB3Q96RU7 358 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 CCL13Q99616 98 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 TMEM243Q9BU79 118 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 CHAC1Q9BUX1 264 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 RNF122Q9H9V4 155 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 TAS2R8Q9NYW2 309 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 RBM12B-AS1Q9P1G2 102 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 RPUSD1Q9UJJ7 312 aaKnown RBP2.13□□□□□ -2.07
VPS13B-207ENST00000518569 BOKQ9UMX3 212 aaPredicted RBP2.13□□□□□ -2.07
VPS13B-207ENST00000518569 SNX12Q9UMY4 172 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 CYSLTR1Q9Y271 337 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 NOP16Q9Y3C1 178 aaKnown RBP2.13□□□□□ -2.07
VPS13B-207ENST00000518569 REV3LO60673 3130 aa2.13□□□□□ -2.07
VPS13B-207ENST00000518569 LAMA3Q16787 3333 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 NCOR1O75376 2440 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 SCN7AQ01118 1682 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF831Q5JPB2 1677 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 TTC28Q96AY4 2481 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 MGAMO43451 1857 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 CACNA1GO43497 2377 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 TRBV20OR9-2A0A075B6H5 130 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 A0A1B0GVX0 72 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 ARRDC5A6NEK1 342 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 TMEM212A6NML5 194 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 LEUTXA8MZ59 168 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 CLDN25C9JDP6 229 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 GABARAPH6UMI1 98 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 ISLRO14498 428 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 NPFFO15130 113 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 SCO1O75880 301 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 LYZL6O75951 148 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 CST7O76096 145 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 MAS1P04201 325 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF705DP0CH99 300 aaPredicted RBP2.12□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF728P0DKX0 622 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 S100A4P26447 101 aaKnown RBP2.12□□□□□ -2.07
VPS13B-207ENST00000518569 TMBIM6P55061 237 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 DEFA1P59665 94 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 LSM3P62310 102 aaKnown RBP2.12□□□□□ -2.07
VPS13B-207ENST00000518569 RPL23P62829 140 aaKnown RBP2.12□□□□□ -2.07
VPS13B-207ENST00000518569 EIF5AP63241 154 aaKnown RBP2.12□□□□□ -2.07
VPS13B-207ENST00000518569 CRADDP78560 199 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 RHOGP84095 191 aa2.12□□□□□ -2.07
VPS13B-207ENST00000518569 MEF2BQ02080 365 aaPredicted RBP2.12□□□□□ -2.07
VPS13B-207ENST00000518569 ENDOGQ14249 297 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms