RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 USF2Q15853 346 aaPredicted RBP16.47■□□□□ 0.23
VEGFA-217ENST00000518538 FAM90A2PQ658T7 463 aa16.47■□□□□ 0.23
VEGFA-217ENST00000518538 NARS2Q96I59 477 aaKnown RBP16.47■□□□□ 0.23
VEGFA-217ENST00000518538 C19orf73Q9NVV2 129 aa16.47■□□□□ 0.23
VEGFA-217ENST00000518538 IGHV3-66A0A0C4DH42 116 aa16.46■□□□□ 0.23
VEGFA-217ENST00000518538 SSNA1O43805 119 aa16.46■□□□□ 0.23
VEGFA-217ENST00000518538 SIX6O95475 246 aa16.46■□□□□ 0.23
VEGFA-217ENST00000518538 HNRNPCP07910 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
VEGFA-217ENST00000518538 DLK1P80370 383 aa16.46■□□□□ 0.23
VEGFA-217ENST00000518538 TCF24Q7RTU0 167 aa16.46■□□□□ 0.23
VEGFA-217ENST00000518538 TMEM144Q7Z5S9 345 aa16.46■□□□□ 0.23
VEGFA-217ENST00000518538 U3KQE9 123 aa16.46■□□□□ 0.23
VEGFA-217ENST00000518538 OR4C46A6NHA9 309 aa16.45■□□□□ 0.22
VEGFA-217ENST00000518538 FNDC10F2Z333 226 aa16.45■□□□□ 0.22
VEGFA-217ENST00000518538 BCAP31P51572 246 aa16.45■□□□□ 0.22
VEGFA-217ENST00000518538 LILRB2Q8N423 598 aa16.45■□□□□ 0.22
VEGFA-217ENST00000518538 RNF125Q96EQ8 232 aa16.45■□□□□ 0.22
VEGFA-217ENST00000518538 NMES1Q9C002 83 aa16.45■□□□□ 0.22
VEGFA-217ENST00000518538 SMCO3A2RU48 225 aa16.44■□□□□ 0.22
VEGFA-217ENST00000518538 OR11H12B2RN74 326 aa16.44■□□□□ 0.22
VEGFA-217ENST00000518538 DFFBO76075 338 aa16.44■□□□□ 0.22
VEGFA-217ENST00000518538 CAV2P51636 162 aa16.44■□□□□ 0.22
VEGFA-217ENST00000518538 RRAS2P62070 204 aaPredicted RBP16.44■□□□□ 0.22
VEGFA-217ENST00000518538 CYCSP99999 105 aaKnown RBP16.44■□□□□ 0.22
VEGFA-217ENST00000518538 GRAMD2BQ96HH9 432 aa16.44■□□□□ 0.22
VEGFA-217ENST00000518538 TUBA4BQ9H853 241 aa16.44■□□□□ 0.22
VEGFA-217ENST00000518538 RABAC1Q9UI14 185 aa16.44■□□□□ 0.22
VEGFA-217ENST00000518538 P2RY1P47900 373 aa16.43■□□□□ 0.22
VEGFA-217ENST00000518538 ARL16Q0P5N6 197 aa16.43■□□□□ 0.22
VEGFA-217ENST00000518538 OR2F1Q13607 317 aa16.43■□□□□ 0.22
VEGFA-217ENST00000518538 DEFB125Q8N687 156 aa16.43■□□□□ 0.22
VEGFA-217ENST00000518538 WFDC10AQ9H1F0 79 aa16.43■□□□□ 0.22
VEGFA-217ENST00000518538 LYRM2Q9NU23 88 aaPredicted RBP16.43■□□□□ 0.22
VEGFA-217ENST00000518538 MGAT4CQ9UBM8 478 aa16.43■□□□□ 0.22
VEGFA-217ENST00000518538 FAM24AA6NFZ4 105 aa16.42■□□□□ 0.22
VEGFA-217ENST00000518538 DEDDO75618 318 aa16.42■□□□□ 0.22
VEGFA-217ENST00000518538 NHLRC4P0CG21 123 aaPredicted RBP16.42■□□□□ 0.22
VEGFA-217ENST00000518538 H2BFSP57053 126 aa16.42■□□□□ 0.22
VEGFA-217ENST00000518538 PAFAH1B2P68402 229 aa16.42■□□□□ 0.22
VEGFA-217ENST00000518538 ASCL2Q99929 193 aa16.42■□□□□ 0.22
VEGFA-217ENST00000518538 PBDC1Q9BVG4 233 aa16.42■□□□□ 0.22
VEGFA-217ENST00000518538 GGACTQ9BVM4 153 aa16.42■□□□□ 0.22
VEGFA-217ENST00000518538 ALG5Q9Y673 324 aa16.42■□□□□ 0.22
VEGFA-217ENST00000518538 IGKV3-7A0A075B6H7 116 aa16.41■□□□□ 0.22
VEGFA-217ENST00000518538 CFDP00746 253 aaPredicted RBP16.41■□□□□ 0.22
VEGFA-217ENST00000518538 NUP62P37198 522 aaPredicted RBP16.41■□□□□ 0.22
VEGFA-217ENST00000518538 EIF2B2P49770 351 aaKnown RBP16.41■□□□□ 0.22
VEGFA-217ENST00000518538 LYZP61626 148 aa16.41■□□□□ 0.22
VEGFA-217ENST00000518538 C16orf54Q6UWD8 224 aa16.41■□□□□ 0.22
VEGFA-217ENST00000518538 SBSPONQ8IVN8 264 aa16.41■□□□□ 0.22
VEGFA-217ENST00000518538 FAM110AQ9BQ89 295 aa16.41■□□□□ 0.22
VEGFA-217ENST00000518538 SRD5A3Q9H8P0 318 aa16.41■□□□□ 0.22
VEGFA-217ENST00000518538 NPVFQ9HCQ7 196 aa16.41■□□□□ 0.22
VEGFA-217ENST00000518538 RLN2P04090 185 aa16.4■□□□□ 0.22
VEGFA-217ENST00000518538 RPL11P62913 178 aaKnown RBP16.4■□□□□ 0.22
VEGFA-217ENST00000518538 GBGT1Q8N5D6 347 aa16.4■□□□□ 0.22
VEGFA-217ENST00000518538 GLMPQ8WWB7 406 aa16.4■□□□□ 0.22
VEGFA-217ENST00000518538 PFDN2Q9UHV9 154 aa16.4■□□□□ 0.22
VEGFA-217ENST00000518538 TRAV2A0A0B4J234 112 aa16.39■□□□□ 0.21
VEGFA-217ENST00000518538 BUB3O43684 328 aa16.39■□□□□ 0.21
VEGFA-217ENST00000518538 CST7O76096 145 aa16.39■□□□□ 0.21
VEGFA-217ENST00000518538 TFPI2P48307 235 aa16.39■□□□□ 0.21
VEGFA-217ENST00000518538 SLC38A11Q08AI6 406 aa16.39■□□□□ 0.21
VEGFA-217ENST00000518538 RGS21Q2M5E4 152 aa16.39■□□□□ 0.21
VEGFA-217ENST00000518538 ODF3L2Q3SX64 289 aa16.39■□□□□ 0.21
VEGFA-217ENST00000518538 LRRC37A5PQ49AS3 106 aa16.39■□□□□ 0.21
VEGFA-217ENST00000518538 CYP2G1PQ6ZSU1 146 aa16.39■□□□□ 0.21
VEGFA-217ENST00000518538 TMEM252Q8N6L7 170 aa16.39■□□□□ 0.21
VEGFA-217ENST00000518538 BPIFCQ8NFQ6 507 aa16.39■□□□□ 0.21
VEGFA-217ENST00000518538 MS4A6AQ9H2W1 248 aa16.39■□□□□ 0.21
VEGFA-217ENST00000518538 UBQLN2Q9UHD9 624 aa16.39■□□□□ 0.21
VEGFA-217ENST00000518538 TGP01266 2768 aa16.38■□□□□ 0.21
VEGFA-217ENST00000518538 IGSF23A1L1A6 192 aa16.38■□□□□ 0.21
VEGFA-217ENST00000518538 HELTA6NFD8 242 aa16.38■□□□□ 0.21
VEGFA-217ENST00000518538 DNASE2O00115 360 aaPredicted RBP16.38■□□□□ 0.21
VEGFA-217ENST00000518538 SULT1A1P50225 295 aa16.38■□□□□ 0.21
VEGFA-217ENST00000518538 TEPPQ6URK8 271 aa16.38■□□□□ 0.21
VEGFA-217ENST00000518538 LINC00322Q6ZN03 302 aaPredicted RBP16.38■□□□□ 0.21
VEGFA-217ENST00000518538 TMEM182Q6ZP80 229 aaPredicted RBP16.38■□□□□ 0.21
VEGFA-217ENST00000518538 STX12Q86Y82 276 aa16.38■□□□□ 0.21
VEGFA-217ENST00000518538 E5RGE8 158 aa16.37■□□□□ 0.21
VEGFA-217ENST00000518538 GATA2P23769 480 aaPredicted RBP16.37■□□□□ 0.21
VEGFA-217ENST00000518538 CMC4P56277 68 aaPredicted RBP16.37■□□□□ 0.21
VEGFA-217ENST00000518538 TMEM217Q8N7C4 229 aa16.37■□□□□ 0.21
VEGFA-217ENST00000518538 PPP1R1CQ8WVI7 109 aa16.37■□□□□ 0.21
VEGFA-217ENST00000518538 RBMY1BA6NDE4 496 aaKnown RBP16.36■□□□□ 0.21
VEGFA-217ENST00000518538 RBMY1EA6NEQ0 496 aaKnown RBP16.36■□□□□ 0.21
VEGFA-217ENST00000518538 RBMY1DP0C7P1 496 aaKnown RBP16.36■□□□□ 0.21
VEGFA-217ENST00000518538 S100A11P31949 105 aa16.36■□□□□ 0.21
VEGFA-217ENST00000518538 AP2S1P53680 142 aaPredicted RBP16.36■□□□□ 0.21
VEGFA-217ENST00000518538 SELENOTP62341 195 aa16.36■□□□□ 0.21
VEGFA-217ENST00000518538 HBG1P69891 147 aa16.36■□□□□ 0.21
VEGFA-217ENST00000518538 HBG2P69892 147 aa16.36■□□□□ 0.21
VEGFA-217ENST00000518538 WFDC3Q8IUB2 231 aa16.36■□□□□ 0.21
VEGFA-217ENST00000518538 STXBP6Q8NFX7 210 aa16.36■□□□□ 0.21
VEGFA-217ENST00000518538 OR5AC2Q9NZP5 309 aa16.36■□□□□ 0.21
VEGFA-217ENST00000518538 SLC45A2Q9UMX9 530 aa16.36■□□□□ 0.21
VEGFA-217ENST00000518538 H0YIZ8 118 aa16.35■□□□□ 0.21
VEGFA-217ENST00000518538 HAGHQ16775 308 aa16.35■□□□□ 0.21
VEGFA-217ENST00000518538 C1orf194Q5T5A4 169 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms