RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 ARHGAP5-AS1Q96IT6 56 aa2.32□□□□□ -2.04
SCARNA13-201ENST00000516672 S1PR3Q99500 378 aa2.32□□□□□ -2.04
SCARNA13-201ENST00000516672 RARRES2Q99969 163 aa2.32□□□□□ -2.04
SCARNA13-201ENST00000516672 PYGO2Q9BRQ0 406 aa2.32□□□□□ -2.04
SCARNA13-201ENST00000516672 AGMATQ9BSE5 352 aa2.32□□□□□ -2.04
SCARNA13-201ENST00000516672 CABLES2Q9BTV7 478 aa2.32□□□□□ -2.04
SCARNA13-201ENST00000516672 SNHG12Q9BXW3 62 aa2.32□□□□□ -2.04
SCARNA13-201ENST00000516672 SMIM3Q9BZL3 60 aa2.32□□□□□ -2.04
SCARNA13-201ENST00000516672 PARP12Q9H0J9 701 aaKnown RBP2.32□□□□□ -2.04
SCARNA13-201ENST00000516672 SMDT1Q9H4I9 107 aa2.32□□□□□ -2.04
SCARNA13-201ENST00000516672 PLEKHA2Q9HB19 425 aa2.32□□□□□ -2.04
SCARNA13-201ENST00000516672 GNG12Q9UBI6 72 aa2.32□□□□□ -2.04
SCARNA13-201ENST00000516672 AK3Q9UIJ7 227 aa2.32□□□□□ -2.04
SCARNA13-201ENST00000516672 FBXO7Q9Y3I1 522 aa2.32□□□□□ -2.04
SCARNA13-201ENST00000516672 NACAE9PAV3 2078 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 TRBV24-1A0A075B6N3 115 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 TRAV1-1A0A0B4J248 108 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 A0A1B0GU03 582 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 A6NDX4 124 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 RBFOX3A6NFN3 312 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 MARCH11A6NNE9 402 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 E5RGE8 158 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 HSPA12AO43301 675 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 TUSC2O75896 110 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 MMP23AO75900 390 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 TRGC2P03986 189 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 TRGC1P0CF51 173 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 PET100P0DJ07 73 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 OR13C7P0DN81 318 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 RAB4AP20338 218 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 COX7A1P24310 79 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 ATP6V0CP27449 155 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 RPS10P46783 165 aaKnown RBP2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 LGALS7P47929 136 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 CAMLGP49069 296 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 ZNF134P52741 427 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 TAS2R46P59540 309 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 RND3P61587 244 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 HLA-DRB3P79483 266 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 NHLH2Q02577 135 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 ARFRP1Q13795 201 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 ZNF674Q2M3X9 581 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 PRAMEF5Q5TYX0 476 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 ZNF833PQ6ZTB9 187 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 SLC35E3Q7Z769 313 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 ZNF329Q86UD4 541 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 TMEM183AQ8IXX5 376 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 ZNF664Q8N3J9 261 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 TCTEX1D1Q8N7M0 179 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 CYB561D1Q8N8Q1 229 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 ZBTB34Q8NCN2 500 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 OR5AN1Q8NGI8 311 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 OR4D5Q8NGN0 318 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 OR5H2Q8NGV7 314 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 OR2T10Q8NGZ9 312 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 OR1P1Q8NH06 330 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 OR4X1Q8NH49 305 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 OR1L1Q8NH94 360 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 RNASE11Q8TAA1 199 aaKnown RBP2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 RFESDQ8TAC1 157 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 RTN4IP1Q8WWV3 396 aaPredicted RBP2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 MAFIPQ8WZ33 124 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 RPEQ96AT9 228 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 ADTRPQ96IZ2 230 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 PACRGQ96M98 296 aaPredicted RBP2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 NOL4LQ96MY1 436 aaPredicted RBP2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 TMEM70Q9BUB7 260 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 ACTR3CQ9C0K3 210 aaPredicted RBP2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 NAA60Q9H7X0 242 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 ZNF286AQ9HBT8 521 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 EHFQ9NZC4 300 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 ANXA10Q9UJ72 324 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 ZNF580Q9UK33 172 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 TCF19Q9Y242 345 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 NSG2Q9Y328 171 aa2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 PUS1Q9Y606 427 aaKnown RBP eCLIP2.31□□□□□ -2.04
SCARNA13-201ENST00000516672 BORCS7-ASMTA0A0B4J1R7 106 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 PIGBOS1A0A0B4J2F0 54 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 IGHV1-3A0A0C4DH29 117 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 IGKV1-6A0A0C4DH72 117 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 A0A1W2PPI3 338 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 PSMB11A5LHX3 300 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 KRTAP4-16G5E9R7 235 aaPredicted RBP2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 TSTD3H0UI37 97 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 LCE2BO14633 110 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 PPP1R2P9O14990 202 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 RBFOX2O43251 390 aaKnown RBP eCLIP2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 TMEM50AO95807 157 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 MOSP00540 346 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 IFNA21P01568 189 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 HSPB1P04792 205 aaKnown RBP2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 PFN1P07737 140 aaKnown RBP2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 SCTP09683 121 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 OR5AC1P0C628 307 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 OR5H8P0DN80 308 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 FABP4P15090 132 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 FGF7P21781 194 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 TAGLN2P37802 199 aaKnown RBP2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 PAX9P55771 341 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms