RNA–Protein interactions for RNA: ENST00000515509.1

CXXC4-203, Transcript of CXXC finger protein 4, humanhuman

TSL 2

Gene CXXC4, Length 363 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-203ENST00000515509 C14orf105Q9NVL8 296 aa0.24□□□□□ -2.37
CXXC4-203ENST00000515509 RIMBP3CA6NJZ7 1639 aa0.24□□□□□ -2.37
CXXC4-203ENST00000515509 RIMBP3BA6NNM3 1639 aa0.24□□□□□ -2.37
CXXC4-203ENST00000515509 RIMBP3Q9UFD9 1639 aa0.24□□□□□ -2.37
CXXC4-203ENST00000515509 DOCK3Q8IZD9 2030 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 PIK3C2GO75747 1445 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 SMIM9A6NGZ8 99 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 NIPSNAP2O75323 286 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 GADD45GO95257 159 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 LYPLA2O95372 231 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 PRH1P02810 166 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 C8GP07360 202 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 SMIM17P0DL12 118 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 SRIP30626 198 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 RNASE4P34096 147 aaKnown RBP0.23□□□□□ -2.37
CXXC4-203ENST00000515509 ANP32AP39687 249 aaKnown RBP0.23□□□□□ -2.37
CXXC4-203ENST00000515509 AP3S2P59780 193 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 RANP62826 216 aaKnown RBP0.23□□□□□ -2.37
CXXC4-203ENST00000515509 DYNLT1P63172 113 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 Q6Q795 121 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 GKN2Q86XP6 184 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 SLC25A40Q8TBP6 338 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.23□□□□□ -2.37
CXXC4-203ENST00000515509 UQCC1Q9NVA1 299 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 ARHGEF28Q8N1W1 1705 aaKnown RBP0.23□□□□□ -2.37
CXXC4-203ENST00000515509 SCN3AQ9NY46 2000 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 PLXND1Q9Y4D7 1925 aa0.23□□□□□ -2.37
CXXC4-203ENST00000515509 SERPINE1P05121 402 aa0.22□□□□□ -2.37
CXXC4-203ENST00000515509 RPS17P08708 135 aaKnown RBP0.22□□□□□ -2.37
CXXC4-203ENST00000515509 LSM6P62312 80 aaKnown RBP0.22□□□□□ -2.37
CXXC4-203ENST00000515509 RHOBP62745 196 aa0.22□□□□□ -2.37
CXXC4-203ENST00000515509 AESQ08117 197 aa0.22□□□□□ -2.37
CXXC4-203ENST00000515509 EDDM3AQ14507 147 aa0.22□□□□□ -2.37
CXXC4-203ENST00000515509 SLC30A7Q8NEW0 376 aa0.22□□□□□ -2.37
CXXC4-203ENST00000515509 TMEM254Q8TBM7 123 aa0.22□□□□□ -2.37
CXXC4-203ENST00000515509 PRADC1Q9BSG0 188 aa0.22□□□□□ -2.37
CXXC4-203ENST00000515509 TLNRD1Q9H1K6 362 aa0.22□□□□□ -2.37
CXXC4-203ENST00000515509 TVP23BQ9NYZ1 205 aa0.22□□□□□ -2.37
CXXC4-203ENST00000515509 IDI2-AS1Q9NZ38 188 aa0.22□□□□□ -2.37
CXXC4-203ENST00000515509 TMEM14CQ9P0S9 112 aa0.22□□□□□ -2.37
CXXC4-203ENST00000515509 FBXO5Q9UKT4 447 aa0.22□□□□□ -2.37
CXXC4-203ENST00000515509 PRELID3BQ9Y3B1 194 aa0.22□□□□□ -2.37
CXXC4-203ENST00000515509 NCOA1Q15788 1441 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 RTL1A6NKG5 1358 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 IGHV1-58A0A0C4DH39 117 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 TCRBV4S1A1TA0A5B7 111 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 TLCD2A6NGC4 264 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 J3QRK9 145 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 CYB5BO43169 146 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 PDE6DO43924 150 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 NUPR1O60356 82 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 KLF7O75840 302 aaPredicted RBP0.21□□□□□ -2.38
CXXC4-203ENST00000515509 TCRBP04435 133 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 DEFA3P59666 94 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 HIST1H3AP68431 136 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 H3F3AP84243 136 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 ST6GALNAC3Q8NDV1 305 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 PLPP5Q8NEB5 264 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 OR8J2Q8NGG1 315 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 OR52L1Q8NGH7 329 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 OR51A2Q8NGJ7 313 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 FAM172AQ8WUF8 416 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 ARL5BQ96KC2 179 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 LINC00052Q96N35 136 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 GPER1Q99527 375 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 TRIM4Q9C037 500 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 UCK1Q9HA47 277 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 TAS2R7Q9NYW3 318 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 ZFC3H1O60293 1989 aaKnown RBP0.21□□□□□ -2.38
CXXC4-203ENST00000515509 KIAA1549Q9HCM3 1950 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 ZFYVE9O95405 1425 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 TNS3Q68CZ2 1445 aa0.21□□□□□ -2.38
CXXC4-203ENST00000515509 TIMM17BO60830 172 aa0.2□□□□□ -2.38
CXXC4-203ENST00000515509 RPP14O95059 124 aaKnown RBP0.2□□□□□ -2.38
CXXC4-203ENST00000515509 HOXA6P31267 233 aa0.2□□□□□ -2.38
CXXC4-203ENST00000515509 EIF5AP63241 154 aaKnown RBP0.2□□□□□ -2.38
CXXC4-203ENST00000515509 OR2T35Q8NGX2 323 aa0.2□□□□□ -2.38
CXXC4-203ENST00000515509 SMR3AQ99954 134 aa0.2□□□□□ -2.38
CXXC4-203ENST00000515509 TMEM126AQ9H061 195 aa0.2□□□□□ -2.38
CXXC4-203ENST00000515509 GLTPQ9NZD2 209 aa0.2□□□□□ -2.38
CXXC4-203ENST00000515509 ORMDL1Q9P0S3 153 aa0.2□□□□□ -2.38
CXXC4-203ENST00000515509 FRAS1Q86XX4 4008 aa0.2□□□□□ -2.38
CXXC4-203ENST00000515509 PLB1Q6P1J6 1458 aa0.2□□□□□ -2.38
CXXC4-203ENST00000515509 CASP8AP2Q9UKL3 1982 aa0.19□□□□□ -2.38
CXXC4-203ENST00000515509 OR2T8A6NH00 312 aa0.19□□□□□ -2.38
CXXC4-203ENST00000515509 HAND1O96004 215 aa0.19□□□□□ -2.38
CXXC4-203ENST00000515509 CEBPGP53567 150 aa0.19□□□□□ -2.38
CXXC4-203ENST00000515509 TMEM97Q5BJF2 176 aa0.19□□□□□ -2.38
CXXC4-203ENST00000515509 KRTAP26-1Q6PEX3 210 aa0.19□□□□□ -2.38
CXXC4-203ENST00000515509 ZNF833PQ6ZTB9 187 aa0.19□□□□□ -2.38
CXXC4-203ENST00000515509 GRINAQ7Z429 371 aa0.19□□□□□ -2.38
CXXC4-203ENST00000515509 PDZD9Q8IXQ8 264 aa0.19□□□□□ -2.38
CXXC4-203ENST00000515509 STAG3L4Q8TBR4 150 aa0.19□□□□□ -2.38
CXXC4-203ENST00000515509 TP53RKQ96S44 253 aa0.19□□□□□ -2.38
CXXC4-203ENST00000515509 LINC00467Q9BRT7 94 aa0.19□□□□□ -2.38
CXXC4-203ENST00000515509 PHRF1Q9P1Y6 1649 aaKnown RBP0.19□□□□□ -2.38
CXXC4-203ENST00000515509 CCDC144AA2RUR9 1427 aa0.19□□□□□ -2.38
CXXC4-203ENST00000515509 TRAV4A0A0B4J268 109 aa0.18□□□□□ -2.38
CXXC4-203ENST00000515509 SRP14P37108 136 aaKnown RBP0.18□□□□□ -2.38
CXXC4-203ENST00000515509 ROMO1P60602 79 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms