RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 LDLRAD4O15165 306 aa11.85□□□□□ -0.51
TRIO-222ENST00000515144 VENTXO95231 258 aa11.85□□□□□ -0.51
TRIO-222ENST00000515144 OR10J3Q5JRS4 329 aa11.85□□□□□ -0.51
TRIO-222ENST00000515144 NPDC1Q9NQX5 325 aaPredicted RBP11.85□□□□□ -0.51
TRIO-222ENST00000515144 FBLIM1Q8WUP2 373 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 DUTP33316 252 aaKnown RBP11.84□□□□□ -0.51
TRIO-222ENST00000515144 LEPP41159 167 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 C2orf68Q2NKX9 166 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 GATAD1Q8WUU5 269 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 FAM131CQ96AQ9 280 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 AQP10Q96PS8 301 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 NAT1P18440 290 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 CR1LQ2VPA4 569 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 SPATA45Q537H7 98 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 NPIPB5A8MRT5 1133 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 GAFA1Q96PS6 74 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 SLC25A39Q9BZJ4 359 aaPredicted RBP11.84□□□□□ -0.51
TRIO-222ENST00000515144 TRGV1A0A0A0MS02 117 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 SLC25A16P16260 332 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 B3GALT5-AS1P59052 145 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 CFAP161Q6P656 301 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 FER1L6-AS1Q8NA97 138 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 SCGB1A1P11684 91 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 EXOC3-AS1Q8N2X6 119 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 OR10AG1Q8NH19 301 aa11.84□□□□□ -0.51
TRIO-222ENST00000515144 PMS2P5A8MQ11 134 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 GZMBP10144 247 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 RNF114Q9Y508 228 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 TRBV6-7A0A0A0MS04 114 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 IGKV1-12A0A0C4DH73 117 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 IGKV1D-12P01611 117 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 ZNF581Q9P0T4 197 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 A0A0U1RRA0 63 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 IGFBP3P17936 291 aaPredicted RBP11.83□□□□□ -0.52
TRIO-222ENST00000515144 HINT1P49773 126 aaPredicted RBP11.83□□□□□ -0.52
TRIO-222ENST00000515144 SAMD13Q5VXD3 122 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 ZNF660Q6AZW8 331 aaPredicted RBP11.83□□□□□ -0.52
TRIO-222ENST00000515144 FMC1Q96HJ9 113 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 TRAV3A0A0B4J244 114 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 TRAV5A0A0B4J249 113 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 CHCHD5Q9BSY4 110 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 TRAV8-6A0A0B4J262 113 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 ZNF324BQ6AW86 544 aaPredicted RBP11.83□□□□□ -0.52
TRIO-222ENST00000515144 SCGB3A1Q96QR1 104 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 TRAF4Q9BUZ4 470 aaPredicted RBP11.83□□□□□ -0.52
TRIO-222ENST00000515144 ZNF383Q8NA42 475 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 ALKBH7Q9BT30 221 aaPredicted RBP11.83□□□□□ -0.52
TRIO-222ENST00000515144 SCRT1Q9BWW7 348 aa11.83□□□□□ -0.52
TRIO-222ENST00000515144 TBL2Q9Y4P3 447 aaKnown RBP11.82□□□□□ -0.52
TRIO-222ENST00000515144 A0A087X0M5 115 aa11.82□□□□□ -0.52
TRIO-222ENST00000515144 A0A1B0GX30 115 aa11.82□□□□□ -0.52
TRIO-222ENST00000515144 SRRM5B3KS81 715 aa11.82□□□□□ -0.52
TRIO-222ENST00000515144 PAX1P15863 534 aa11.82□□□□□ -0.52
TRIO-222ENST00000515144 ZNF600Q6ZNG1 722 aa11.82□□□□□ -0.52
TRIO-222ENST00000515144 RCC1LQ96I51 464 aaKnown RBP11.82□□□□□ -0.52
TRIO-222ENST00000515144 IGFBPL1Q8WX77 278 aa11.82□□□□□ -0.52
TRIO-222ENST00000515144 RAI1Q7Z5J4 1906 aaPredicted RBP11.82□□□□□ -0.52
TRIO-222ENST00000515144 HOXA3O43365 443 aaPredicted RBP11.82□□□□□ -0.52
TRIO-222ENST00000515144 ADAMTS20P59510 1910 aa11.82□□□□□ -0.52
TRIO-222ENST00000515144 DEFB130BP0DP73 79 aa11.82□□□□□ -0.52
TRIO-222ENST00000515144 DEFB130AP0DP74 79 aa11.82□□□□□ -0.52
TRIO-222ENST00000515144 HBBP68871 147 aa11.82□□□□□ -0.52
TRIO-222ENST00000515144 IGKV1D-8A0A087WSZ0 117 aa11.82□□□□□ -0.52
TRIO-222ENST00000515144 LYPD3O95274 346 aa11.82□□□□□ -0.52
TRIO-222ENST00000515144 GPX4P36969 197 aaPredicted RBP11.82□□□□□ -0.52
TRIO-222ENST00000515144 SNAI2O43623 268 aa11.81□□□□□ -0.52
TRIO-222ENST00000515144 RPLP1P05386 114 aaKnown RBP11.81□□□□□ -0.52
TRIO-222ENST00000515144 CNTFRP26992 372 aa11.81□□□□□ -0.52
TRIO-222ENST00000515144 COX19Q49B96 90 aa11.81□□□□□ -0.52
TRIO-222ENST00000515144 HIGD1CA8MV81 97 aa11.81□□□□□ -0.52
TRIO-222ENST00000515144 SLC25A48Q6ZT89 311 aaKnown RBP11.81□□□□□ -0.52
TRIO-222ENST00000515144 RNF144BQ7Z419 303 aa11.81□□□□□ -0.52
TRIO-222ENST00000515144 HIST1H2BAQ96A08 127 aa11.81□□□□□ -0.52
TRIO-222ENST00000515144 RCHY1Q96PM5 261 aa11.81□□□□□ -0.52
TRIO-222ENST00000515144 A0A1B0GV72 72 aa11.81□□□□□ -0.52
TRIO-222ENST00000515144 LAIR2Q6ISS4 152 aa11.81□□□□□ -0.52
TRIO-222ENST00000515144 IMMP2LQ96T52 175 aa11.81□□□□□ -0.52
TRIO-222ENST00000515144 ZNF257Q9Y2Q1 563 aa11.8□□□□□ -0.52
TRIO-222ENST00000515144 OR11H12B2RN74 326 aa11.8□□□□□ -0.52
TRIO-222ENST00000515144 DANCRP0C864 163 aa11.8□□□□□ -0.52
TRIO-222ENST00000515144 CRYGSP22914 178 aa11.8□□□□□ -0.52
TRIO-222ENST00000515144 TMEM183AQ8IXX5 376 aa11.8□□□□□ -0.52
TRIO-222ENST00000515144 PRELID3AQ96N28 172 aa11.8□□□□□ -0.52
TRIO-222ENST00000515144 COL5A1P20908 1838 aaPredicted RBP11.8□□□□□ -0.52
TRIO-222ENST00000515144 IGKV1D-17A0A075B6S4 117 aa11.8□□□□□ -0.52
TRIO-222ENST00000515144 KCNS1Q96KK3 526 aa11.8□□□□□ -0.52
TRIO-222ENST00000515144 PGPEP1Q9NXJ5 209 aa11.8□□□□□ -0.52
TRIO-222ENST00000515144 UCP1P25874 307 aa11.8□□□□□ -0.52
TRIO-222ENST00000515144 NPC2P61916 151 aa11.8□□□□□ -0.52
TRIO-222ENST00000515144 MINOS1Q5TGZ0 78 aa11.8□□□□□ -0.52
TRIO-222ENST00000515144 MINOS1-NBL1R4GNA1 71 aa11.8□□□□□ -0.52
TRIO-222ENST00000515144 ADARB2-AS1A8MUL3 147 aa11.79□□□□□ -0.52
TRIO-222ENST00000515144 TCF21O43680 179 aa11.79□□□□□ -0.52
TRIO-222ENST00000515144 NDUFS7O75251 213 aa11.79□□□□□ -0.52
TRIO-222ENST00000515144 HGFACQ04756 655 aa11.79□□□□□ -0.52
TRIO-222ENST00000515144 DSCAML1Q8TD84 2053 aa11.79□□□□□ -0.52
TRIO-222ENST00000515144 A6NDN8 102 aa11.79□□□□□ -0.52
TRIO-222ENST00000515144 M0R143 59 aa11.79□□□□□ -0.52
TRIO-222ENST00000515144 M0R1W7 72 aa11.79□□□□□ -0.52
TRIO-222ENST00000515144 APOHP02749 345 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms