RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 K7EIM0 57 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 RBFOX2O43251 390 aaKnown RBP eCLIP2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 FKBP6O75344 327 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 HLA-DQB1P01920 261 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 HBE1P02100 147 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 CTXN2P0C2S0 81 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 TRAPPC2P0DI81 140 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 TRAPPC2BP0DI82 140 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 OR13C7P0DN81 318 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 CD36P16671 472 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 NPPCP23582 126 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 CRHBPP24387 322 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 MAPK3P27361 379 aaPredicted RBP2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 TMEM50BP56557 158 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 LINC00315P59091 139 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 TAS2R31P59538 309 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 B2MP61769 119 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 SNRPD3P62318 126 aaKnown RBP2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 POU2AF1Q16633 256 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 RRN3P1Q2M238 152 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 FFAR4Q5NUL3 377 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 C1orf100Q5SVJ3 147 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 OR2G6Q5TZ20 316 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 SPATA31B1PQ5VZV4 182 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 TOMM20LQ6UXN7 152 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 TMPRSS11AQ6ZMR5 421 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 Q6ZS49 121 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 LRRTM1Q86UE6 522 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 VKORC1L1Q8N0U8 176 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 FAM24BQ8N5W8 94 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 SMIM19Q96E16 107 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 CMSS1Q9BQ75 279 aaKnown RBP2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 TMEM59Q9BXS4 323 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 GABARAPL3Q9BY60 117 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 GABARAPL1Q9H0R8 117 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 ZNF586Q9NXT0 402 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 EXTL2Q9UBQ6 330 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 AK3Q9UIJ7 227 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 MRPS16Q9Y3D3 137 aaKnown RBP2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 GOLT1BQ9Y3E0 138 aa2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 F11RQ9Y624 299 aaKnown RBP2.47□□□□□ -2.01
PDLIM5-218ENST00000513341 IGHV3OR16-13A0A075B7E8 117 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 TRAV9-2A0A087WT02 112 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 IGHV3-49A0A0A0MS15 119 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 IGHV3-74A0A0B4J1X5 117 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 TRAV3A0A0B4J244 114 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 TEX50A0A1B0GTY4 177 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 FOXI3A8MTJ6 420 aaPredicted RBP2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 TMEM14DPA8MWL7 114 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 PRSS46E5RG02 174 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 F5H768 121 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 UPK2O00526 184 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 BET1O15155 118 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 CTDSPLO15194 276 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 SOCS1O15524 211 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 GNG7O60262 68 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 NOL3O60936 208 aaKnown RBP2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 TSC22D2O75157 780 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 HPRT1P00492 218 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 ZNF688P0C7X2 276 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 LIMS3P0CW19 117 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 LIMS4P0CW20 117 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 HLA-DRB4P13762 266 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 NQO2P16083 231 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 CRYBB3P26998 211 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 TSPOP30536 169 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 POLR2IP36954 125 aaKnown RBP2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 NPBWR1P48145 328 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 RPS11P62280 158 aaKnown RBP eCLIP2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 RPL30P62888 115 aaKnown RBP2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 MRPS15P82914 257 aaKnown RBP2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 QRFPP83859 136 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 WT1-ASQ06250 92 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 OPCMLQ14982 345 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 P2RY14Q15391 338 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 MSMO1Q15800 293 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 ESRGQ1W209 222 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 ZFP69Q49AA0 526 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 TMEM69Q5SWH9 247 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 ZNF600Q6ZNG1 722 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 NOTCH2NLQ7Z3S9 236 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 H1FOOQ8IZA3 346 aaPredicted RBP2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 UBAC2Q8NBM4 344 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 STXBP6Q8NFX7 210 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 OR10W1Q8NGF6 305 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 OR1L8Q8NGR8 309 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 OR1P1Q8NH06 330 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 LSM10Q969L4 123 aaKnown RBP2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 C5orf30Q96GV9 206 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 NARS2Q96I59 477 aaKnown RBP2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 TMEM56Q96MV1 263 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 CIB1Q99828 191 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 GINS4Q9BRT9 223 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 LPAR5Q9H1C0 372 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 DCSTAMPQ9H295 470 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 FGF20Q9NP95 211 aaPredicted RBP2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 NDUFA4L2Q9NRX3 87 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 FKBP11Q9NYL4 201 aa2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 ELF5Q9UKW6 265 aaPredicted RBP2.46□□□□□ -2.02
PDLIM5-218ENST00000513341 RBMX2Q9Y388 322 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms