RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PARP12Q9H0J9 701 aaKnown RBP2.73□□□□□ -1.97
HTT-210ENST00000512909 LPAR5Q9H1C0 372 aa2.73□□□□□ -1.97
HTT-210ENST00000512909 OR51E2Q9H255 320 aa2.73□□□□□ -1.97
HTT-210ENST00000512909 VCX3AQ9NNX9 186 aa2.73□□□□□ -1.97
HTT-210ENST00000512909 CYTL1Q9NRR1 136 aa2.73□□□□□ -1.97
HTT-210ENST00000512909 LSM2Q9Y333 95 aaKnown RBP2.73□□□□□ -1.97
HTT-210ENST00000512909 SONP18583 2426 aaKnown RBP2.73□□□□□ -1.97
HTT-210ENST00000512909 IGKV2-28A0A075B6P5 120 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 TRAV41A0A0B4J266 112 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 SMIM31A0A1B0GVY4 71 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 TRDV1A0A1B0GX56 115 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 TRIM64CA6NLI5 447 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 IFITM5A6NNB3 132 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 TMEM14DPA8MWL7 114 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 INS-IGF2F8WCM5 200 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 G3V318 75 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 FABP7O15540 132 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 FGF16O43320 207 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 IGKV2D-28P01615 120 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 IGHV3-11P01762 117 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 IGHG2P01859 326 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 APOA2P02652 100 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 SAA2P0DJI9 122 aaPredicted RBP2.72□□□□□ -1.97
HTT-210ENST00000512909 APELAP0DMC3 54 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 CD36P16671 472 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 F2RP25116 425 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 CDKN1BP46527 198 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 GNG2P59768 71 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 ARPC4P59998 168 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 TMEM267Q0VDI3 215 aaPredicted RBP2.72□□□□□ -1.97
HTT-210ENST00000512909 SSX1Q16384 188 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 Q3ZCU0 254 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 UNQ5815/PRO19632Q6UWF5 114 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 FAM131AQ6UXB0 335 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 ZNF695Q8IW36 515 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 Q8N2B8 174 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 STPG2Q8N412 459 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 LINC00311Q8N616 119 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 C5orf56Q8N8D9 126 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 OR10G4Q8NGN3 311 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 CASTOR1Q8WTX7 329 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 FLYWCH2Q96CP2 140 aaKnown RBP2.72□□□□□ -1.97
HTT-210ENST00000512909 KCTD7Q96MP8 289 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 NABP2Q9BQ15 211 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 SLC25A2Q9BXI2 301 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 ABCG5Q9H222 651 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 FBXL15Q9H469 300 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 LINC00574Q9H8X3 128 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 DIABLOQ9NR28 239 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 TXNL4BQ9NX01 149 aaKnown RBP2.72□□□□□ -1.97
HTT-210ENST00000512909 METTL1Q9UBP6 276 aaKnown RBP2.72□□□□□ -1.97
HTT-210ENST00000512909 JPT1Q9UK76 154 aa2.72□□□□□ -1.97
HTT-210ENST00000512909 IGLV4-60A0A075B6I1 120 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 A0A087WXM4 84 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 TRAV1-2A0A0B4J238 106 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 MEIS3P1A6NDR6 274 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 FAM25AB3EWG3 89 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 FAM25CB3EWG5 89 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 FAM25GB3EWG6 89 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 AIREO43918 545 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 MRPS14O60783 128 aaKnown RBP2.71□□□□□ -1.98
HTT-210ENST00000512909 OR2J3O76001 311 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 CT45A6P0DMU7 189 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 CT45A5P0DMU8 189 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 CT45A7P0DMV0 189 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 OR5H8P0DN80 308 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 NFYAP23511 347 aaPredicted RBP2.71□□□□□ -1.98
HTT-210ENST00000512909 SDC2P34741 201 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 MYCNOSP40205 109 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 SERPINB10P48595 397 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 TPPP2P59282 170 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 GABARAPL2P60520 117 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 HLA-DRB3P79483 266 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 QRFPP83859 136 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 FXYD3Q14802 87 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 KIR2DS1Q14954 304 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 HMGN3Q15651 99 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 TNXAQ16473 311 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 RTL8BQ17RB0 113 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 DEFB136Q30KP8 78 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 DEFB116Q30KQ4 102 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 ZNF773Q6PK81 442 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 COMMD1Q8N668 190 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 C8orf31Q8N9H6 132 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 ZNF439Q8NDP4 499 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 LFNGQ8NES3 379 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 OR11H1Q8NG94 326 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 OR4A4PQ8NGN8 299 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 OR1S2Q8NGQ3 325 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 OR5B3Q8NH48 314 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 OR4S2Q8NH73 311 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 GRPEL2Q8TAA5 225 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 GIMAP1Q8WWP7 306 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 ACOT12Q8WYK0 555 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 S100A16Q96FQ6 103 aaKnown RBP2.71□□□□□ -1.98
HTT-210ENST00000512909 TSNAXQ99598 290 aaKnown RBP2.71□□□□□ -1.98
HTT-210ENST00000512909 HSPB9Q9BQS6 159 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 FAM103A1Q9BTL3 118 aaKnown RBP2.71□□□□□ -1.98
HTT-210ENST00000512909 C20orf24Q9BUV8 137 aa2.71□□□□□ -1.98
HTT-210ENST00000512909 OR2D2Q9H210 308 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms