RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 NPCDR1Q9BY65 106 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 SLC39A9Q9NUM3 307 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 BAZ1AQ9NRL2 1556 aaPredicted RBP4.31□□□□□ -1.72
CHD1-208ENST00000512392 PTPRTO14522 1441 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 KDM6AO15550 1401 aaPredicted RBP4.31□□□□□ -1.72
CHD1-208ENST00000512392 TRGV10A0A0A0MS01 117 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 IGHV3-49A0A0A0MS15 119 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 A8MWL6 223 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 OOSP1A8MZH6 123 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 BMPR1BO00238 502 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 SLC25A14O95258 325 aaPredicted RBP4.31□□□□□ -1.72
CHD1-208ENST00000512392 CLLU1Q5K131 121 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 Q6AWC8 147 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 ZNF880Q6PDB4 577 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 SOSTDC1Q6X4U4 206 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 ZFAND2AQ8N6M9 145 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 TMEM204Q9BSN7 226 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 TXNL4BQ9NX01 149 aaKnown RBP4.31□□□□□ -1.72
CHD1-208ENST00000512392 CHCHD2Q9Y6H1 151 aaPredicted RBP4.31□□□□□ -1.72
CHD1-208ENST00000512392 NSD3Q9BZ95 1437 aa4.3□□□□□ -1.72
CHD1-208ENST00000512392 DICER1Q9UPY3 1922 aaKnown RBP4.3□□□□□ -1.72
CHD1-208ENST00000512392 SYNGR2O43760 224 aa4.3□□□□□ -1.72
CHD1-208ENST00000512392 OR1I1O60431 355 aa4.3□□□□□ -1.72
CHD1-208ENST00000512392 HIST1H2BKO60814 126 aa4.3□□□□□ -1.72
CHD1-208ENST00000512392 HIST1H2BJP06899 126 aa4.3□□□□□ -1.72
CHD1-208ENST00000512392 NUDT2P50583 147 aa4.3□□□□□ -1.72
CHD1-208ENST00000512392 C9orf153Q5TBE3 101 aa4.3□□□□□ -1.72
CHD1-208ENST00000512392 C9orf47Q6ZRZ4 202 aa4.3□□□□□ -1.72
CHD1-208ENST00000512392 C7orf65Q6ZTY9 151 aa4.3□□□□□ -1.72
CHD1-208ENST00000512392 C15orf56Q8N910 161 aa4.3□□□□□ -1.72
CHD1-208ENST00000512392 KLHL30-AS1Q8NEE0 82 aa4.3□□□□□ -1.72
CHD1-208ENST00000512392 C21orf62Q9NYP8 219 aa4.3□□□□□ -1.72
CHD1-208ENST00000512392 COL18A1P39060 1754 aa4.3□□□□□ -1.72
CHD1-208ENST00000512392 KTN1Q86UP2 1357 aaKnown RBP4.3□□□□□ -1.72
CHD1-208ENST00000512392 YEATS2Q9ULM3 1422 aa4.3□□□□□ -1.72
CHD1-208ENST00000512392 IGKV6D-41A0A0C4DH26 115 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 A0A1W2PRS3 328 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 A8MWP4 228 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 INSP01308 110 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 ZNF286BP0CG31 522 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 CCL3P10147 92 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 UBE2AP49459 152 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 ZNF90Q03938 601 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 RPL18Q07020 188 aaKnown RBP4.29□□□□□ -1.72
CHD1-208ENST00000512392 FAM78AQ5JUQ0 283 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 ATOH7Q8N100 152 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 BPIFB6Q8NFQ5 453 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 LSM10Q969L4 123 aaKnown RBP4.29□□□□□ -1.72
CHD1-208ENST00000512392 LITAFQ99732 161 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 C11orf1Q9H5F2 150 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 OSTCQ9NRP0 149 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 DSCAML1Q8TD84 2053 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 TET2Q6N021 2002 aaPredicted RBP4.29□□□□□ -1.72
CHD1-208ENST00000512392 TRAV12-2A0A075B6T6 113 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 IGKV3D-20A0A0C4DH25 116 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 MUC21A0A0G2JKD1 596 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 A0A1B0GUV1 79 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 PINLYPA6NC86 204 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 UQCRQO14949 82 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 IGKV1D-33P01593 117 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 IGKV1-33P01594 117 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 OR5AC1P0C628 307 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 IL7P13232 177 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 NPPCP23582 126 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 AKR1C2P52895 323 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 NTM-AS1Q6ZSK4 140 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 LINC00052Q96N35 136 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 OPRPNQ99935 248 aaPredicted RBP4.29□□□□□ -1.72
CHD1-208ENST00000512392 AGPAT4-IT1Q9H0P7 198 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 GABARAPL1Q9H0R8 117 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 SDF2L1Q9HCN8 221 aa4.29□□□□□ -1.72
CHD1-208ENST00000512392 IGLV1-44P01699 117 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 IGKV2-30P06310 120 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 GIG44P09565 113 aaPredicted RBP4.28□□□□□ -1.72
CHD1-208ENST00000512392 P0C879 139 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 ZFP2Q6ZN57 461 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 NRKQ7Z2Y5 1582 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 AMN1Q8IY45 258 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 SVBPQ8N300 66 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 KCNRGQ8N5I3 272 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.28□□□□□ -1.72
CHD1-208ENST00000512392 Q8N976 141 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 OR5D16Q8NGK9 328 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 OTOSQ8NHW6 89 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 RBMXL1Q96E39 390 aaKnown RBP4.28□□□□□ -1.72
CHD1-208ENST00000512392 HIST1H2BLQ99880 126 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 DEFB126Q9BYW3 111 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 FANCMQ8IYD8 2048 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 RAI1Q7Z5J4 1906 aaPredicted RBP4.28□□□□□ -1.72
CHD1-208ENST00000512392 UBR2Q8IWV8 1755 aa4.28□□□□□ -1.72
CHD1-208ENST00000512392 A6NED7 52 aa4.27□□□□□ -1.73
CHD1-208ENST00000512392 TRGV3P03979 118 aa4.27□□□□□ -1.73
CHD1-208ENST00000512392 IGHV1-8P0DP01 117 aa4.27□□□□□ -1.73
CHD1-208ENST00000512392 YPEL3P61236 119 aaPredicted RBP4.27□□□□□ -1.73
CHD1-208ENST00000512392 TIMM10P62072 90 aa4.27□□□□□ -1.73
CHD1-208ENST00000512392 C2orf83Q53S99 150 aa4.27□□□□□ -1.73
CHD1-208ENST00000512392 Q6ZUT4 128 aa4.27□□□□□ -1.73
CHD1-208ENST00000512392 HIST3H2BBQ8N257 126 aa4.27□□□□□ -1.73
CHD1-208ENST00000512392 C3orf56Q8N813 242 aa4.27□□□□□ -1.73
CHD1-208ENST00000512392 DIRC1Q969H9 104 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms