RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 NPFFO15130 113 aa10.65□□□□□ -0.71
PCDHA4-202ENST00000512229 SPATA31B1PQ5VZV4 182 aa10.65□□□□□ -0.71
PCDHA4-202ENST00000512229 VN1R17PQ8TDU5 208 aa10.65□□□□□ -0.71
PCDHA4-202ENST00000512229 OTORQ9NRC9 128 aa10.65□□□□□ -0.71
PCDHA4-202ENST00000512229 SONP18583 2426 aaKnown RBP10.65□□□□□ -0.71
PCDHA4-202ENST00000512229 TRAV20A0A0B4J274 112 aa10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 ATG101Q9BSB4 218 aa10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 PARD6GQ9BYG4 376 aaPredicted RBP10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 LOC389332A0A1B0GUA5 103 aa10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 GRIFINA4D1Z8 144 aa10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 A6NNC1 897 aa10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 DLX1P56177 255 aa10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 HIST1H1AQ02539 215 aaPredicted RBP10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 HSPB8Q9UJY1 196 aa10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 MOB4Q9Y3A3 225 aa10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 MYO18BQ8IUG5 2567 aa10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 FMC1Q96HJ9 113 aa10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 NEU1Q99519 415 aa10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 TRGV9Q99603 122 aa10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 ELOVL1Q9BW60 279 aa10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 TBL2Q9Y4P3 447 aaKnown RBP10.64□□□□□ -0.71
PCDHA4-202ENST00000512229 SNRPD3P62318 126 aaKnown RBP10.63□□□□□ -0.71
PCDHA4-202ENST00000512229 C15orf32Q32M92 178 aa10.63□□□□□ -0.71
PCDHA4-202ENST00000512229 LINC00311Q8N616 119 aa10.63□□□□□ -0.71
PCDHA4-202ENST00000512229 A0A1W2PPI3 338 aa10.63□□□□□ -0.71
PCDHA4-202ENST00000512229 GNG5P63218 68 aa10.63□□□□□ -0.71
PCDHA4-202ENST00000512229 PRSS22Q9GZN4 317 aa10.63□□□□□ -0.71
PCDHA4-202ENST00000512229 PHLDA3Q9Y5J5 127 aa10.63□□□□□ -0.71
PCDHA4-202ENST00000512229 NAV2Q8IVL1 2488 aa10.63□□□□□ -0.71
PCDHA4-202ENST00000512229 FNDC10F2Z333 226 aa10.63□□□□□ -0.71
PCDHA4-202ENST00000512229 SAA4P35542 130 aa10.63□□□□□ -0.71
PCDHA4-202ENST00000512229 MST1LQ2TV78 715 aa10.63□□□□□ -0.71
PCDHA4-202ENST00000512229 C19orf35Q6ZS72 473 aa10.63□□□□□ -0.71
PCDHA4-202ENST00000512229 ZNF833PQ6ZTB9 187 aa10.63□□□□□ -0.71
PCDHA4-202ENST00000512229 RNASE7Q9H1E1 156 aaKnown RBP10.63□□□□□ -0.71
PCDHA4-202ENST00000512229 DIRC3C9JPN6 131 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 H3BUX3 64 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 LHBP01229 141 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 HBBP68871 147 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 CDC42EP3Q9UKI2 254 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 A0A087X0M5 115 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 TRAV41A0A0B4J266 112 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 A0A1B0GX30 115 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 DGAT2L7PQ6IED9 249 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 SPSB3Q6PJ21 355 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 TBX15Q96SF7 602 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 PAM16Q9Y3D7 125 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 TNCP24821 2201 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 VDAC2P45880 294 aaPredicted RBP10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 SPRNQ5BIV9 151 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 LHFPL4Q7Z7J7 247 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 OR8A1Q8NGG7 326 aa10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 GSX1Q9H4S2 264 aaPredicted RBP10.62□□□□□ -0.71
PCDHA4-202ENST00000512229 GGCTO75223 188 aaKnown RBP10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 SOD3P08294 240 aa10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 TEX38Q6PEX7 206 aa10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 CIARTQ8N365 385 aaPredicted RBP10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 OSTCQ9NRP0 149 aa10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 BPTFQ12830 3046 aa10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 NDUFS8O00217 210 aa10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 TDGF1P3P51864 188 aa10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 ZNF562Q6V9R5 426 aa10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 Q8NA96 180 aa10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 RPP21Q9H633 154 aaKnown RBP10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 NDUFA4L2Q9NRX3 87 aa10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 A0A1B0GUT8 65 aa10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 PMS2P5A8MQ11 134 aa10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 FOXA3P55318 350 aaPredicted RBP10.61□□□□□ -0.71
PCDHA4-202ENST00000512229 TRAV9-1A0A075B6T8 112 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 IGKV3-20P01619 116 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 TSPOP30536 169 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 PTTG1IPP53801 180 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 IMMP2LQ96T52 175 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 CHD8Q9HCK8 2581 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 UBE2E1P51965 193 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 Q6ZN92 141 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 TCF24Q7RTU0 167 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 KIR3DL3Q8N743 410 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 DDB2Q92466 427 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 SLC25A39Q9BZJ4 359 aaPredicted RBP10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 TMEM242Q9NWH2 141 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 FBLL1A6NHQ2 334 aaKnown RBP10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 HIGD1CA8MV81 97 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 OR4X2Q8NGF9 303 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 MYOZ3Q8TDC0 251 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 SLC50A1Q9BRV3 221 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 YAE1D1Q9NRH1 226 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 CTSZQ9UBR2 303 aa10.6□□□□□ -0.71
PCDHA4-202ENST00000512229 LEPROTL1O95214 131 aa10.59□□□□□ -0.71
PCDHA4-202ENST00000512229 SLC25A16P16260 332 aa10.59□□□□□ -0.71
PCDHA4-202ENST00000512229 PAX8Q06710 450 aa10.59□□□□□ -0.71
PCDHA4-202ENST00000512229 SP5Q6BEB4 398 aaPredicted RBP10.59□□□□□ -0.71
PCDHA4-202ENST00000512229 SRSF8Q9BRL6 282 aaKnown RBP10.59□□□□□ -0.71
PCDHA4-202ENST00000512229 SCRT1Q9BWW7 348 aa10.59□□□□□ -0.71
PCDHA4-202ENST00000512229 C9JQL5 133 aa10.59□□□□□ -0.71
PCDHA4-202ENST00000512229 UQCRFS1P47985 274 aa10.59□□□□□ -0.71
PCDHA4-202ENST00000512229 LINC01551Q86U37 167 aa10.59□□□□□ -0.71
PCDHA4-202ENST00000512229 FAM159AQ6UWV7 190 aa10.59□□□□□ -0.71
PCDHA4-202ENST00000512229 TMEM183AQ8IXX5 376 aa10.59□□□□□ -0.71
PCDHA4-202ENST00000512229 ZNF418Q8TF45 676 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms