RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 UBR5O95071 2799 aaPredicted RBP7.69□□□□□ -1.18
USP53-207ENST00000510852 SAA2-SAA4A0A096LPE2 208 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 A0A0A6YYD4 124 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 A6NIN4 97 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 IGLC1P0CG04 106 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 SAA4P35542 130 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 BSPH1Q075Z2 132 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 GAGE13Q4V321 117 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 TMEM255AQ5JRV8 349 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 ZNF695Q8IW36 515 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 OR51G1Q8NGK1 321 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 OR1J1Q8NGS3 322 aa7.69□□□□□ -1.18
USP53-207ENST00000510852 SPTBN1Q01082 2364 aaKnown RBP7.68□□□□□ -1.18
USP53-207ENST00000510852 ARL6IP5O75915 188 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 PRSS3P35030 304 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 TDRG1Q3Y452 100 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 ZNF506Q5JVG8 444 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 SLC25A40Q8TBP6 338 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 KCNIP2Q9NS61 270 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 BET1LQ9NYM9 111 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 A0A0D9SG52 128 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 C19orf84I3L1E1 186 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 ATP5G1P05496 136 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 GPX1P07203 203 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 OR4A8P0C604 315 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 HKR1P10072 659 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 HIST1H2BLQ99880 126 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 ATG5Q9H1Y0 275 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 TMEM100Q9NV29 134 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 EHFQ9NZC4 300 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 KCNIP1Q9NZI2 227 aa7.68□□□□□ -1.18
USP53-207ENST00000510852 USP9XQ93008 2570 aaPredicted RBP7.67□□□□□ -1.18
USP53-207ENST00000510852 M0R233 179 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 RRHO14718 337 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 PLA2G2AP14555 144 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 ZNF20P17024 532 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 SDC2P34741 201 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 TAS2R4Q9NYW5 299 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 ANKHD1Q8IWZ3 2542 aaKnown RBP7.67□□□□□ -1.18
USP53-207ENST00000510852 COL12A1Q99715 3063 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 TRAV1-2A0A0B4J238 106 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 A0A0U1RQV1 116 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 GGT3PA6NGU5 568 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 FNDC10F2Z333 226 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 MPV17P39210 176 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 IL15RAQ13261 267 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 OR2T2Q6IF00 324 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 Q6ZWC4 215 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 C1QL2Q7Z5L3 287 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 C1orf174Q8IYL3 243 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 KLF14Q8TD94 323 aaPredicted RBP7.67□□□□□ -1.18
USP53-207ENST00000510852 OVOL2Q9BRP0 275 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 CKLFQ9UBR5 152 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 DOPEY1Q5JWR5 2465 aa7.67□□□□□ -1.18
USP53-207ENST00000510852 CADP27708 2225 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 CD300LBA8K4G0 201 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 RPS27AP62979 156 aaKnown RBP7.66□□□□□ -1.18
USP53-207ENST00000510852 ZNF146Q15072 292 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 KIAA1644Q3SXP7 199 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 NUP37Q8NFH4 326 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 OR5D14Q8NGL3 314 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 WDR13Q9H1Z4 485 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 HCFC1P51610 2035 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 A0A1B0GV50 99 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 DEFB108AA8MXU0 73 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 SLC17A2O00624 439 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 MMDQ15546 238 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 MSMPQ1L6U9 139 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 ZNF718Q3SXZ3 478 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 Q6ZS46 218 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 LRRTM1Q86UE6 522 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 TTC9CQ8N5M4 171 aa7.66□□□□□ -1.18
USP53-207ENST00000510852 VWC2LB2RUY7 222 aa7.65□□□□□ -1.18
USP53-207ENST00000510852 SHISA9B4DS77 424 aa7.65□□□□□ -1.18
USP53-207ENST00000510852 C8orf87E5RJ46 101 aa7.65□□□□□ -1.18
USP53-207ENST00000510852 J3QKU1 62 aa7.65□□□□□ -1.18
USP53-207ENST00000510852 CAV3P56539 151 aa7.65□□□□□ -1.18
USP53-207ENST00000510852 RPS23P62266 143 aaKnown RBP7.65□□□□□ -1.18
USP53-207ENST00000510852 PAPPA-AS1Q5QFB9 102 aa7.65□□□□□ -1.18
USP53-207ENST00000510852 PVRIGQ6DKI7 326 aa7.65□□□□□ -1.18
USP53-207ENST00000510852 OR5AS1Q8N127 324 aa7.65□□□□□ -1.18
USP53-207ENST00000510852 OR2T6Q8NHC8 308 aa7.65□□□□□ -1.18
USP53-207ENST00000510852 TMEM18Q96B42 140 aa7.65□□□□□ -1.18
USP53-207ENST00000510852 A0A0B4J2A0 478 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 J3QQQ9 107 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 OVOL1O14753 267 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 THBS3P49746 956 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 AKR1C1Q04828 323 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 CNIH2Q6PI25 160 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 LRP11Q86VZ4 500 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 NR2C2APQ86WQ0 139 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 DEFB125Q8N687 156 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 SLC25A46Q96AG3 418 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 SLC25A38Q96DW6 304 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 HS3ST6Q96QI5 342 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 TAS2R8Q9NYW2 309 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 SHPKQ9UHJ6 478 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 HEATR1Q9H583 2144 aaKnown RBP7.64□□□□□ -1.19
USP53-207ENST00000510852 IGKV1-9A0A0C4DH69 117 aa7.64□□□□□ -1.19
USP53-207ENST00000510852 IQCF6A8MYZ5 107 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms