RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 MYH10P35580 1976 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 IGLV3-9A0A075B6K5 115 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 TRAV7A0A075B6U4 112 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 A0A096LPI6 279 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 LOC107984640A0A0U1RRK4 108 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 TMEM235A6NFC5 223 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 CCDC160A6NGH7 325 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 C5orf58C9J3I9 102 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 C3orf84H3BNL1 204 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 K7ERJ3 54 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 GNRH2O43555 120 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 SULT1C4O75897 302 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 CPSF4O95639 269 aaKnown RBP1.1□□□□□ -2.23
XRCC4-204ENST00000509268 NAPSAO96009 420 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 MT-ND4LP03901 98 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 ZNF14P17017 642 aaPredicted RBP1.1□□□□□ -2.23
XRCC4-204ENST00000509268 LGALS3P17931 250 aaKnown RBP1.1□□□□□ -2.23
XRCC4-204ENST00000509268 EIF2B2P49770 351 aaKnown RBP1.1□□□□□ -2.23
XRCC4-204ENST00000509268 DYNLT3P51808 116 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 TMBIM6P55061 237 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 LINC00315P59091 139 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 MED1Q15648 1581 aaPredicted RBP1.1□□□□□ -2.23
XRCC4-204ENST00000509268 BCL2L15Q5TBC7 163 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 C22orf39Q6P5X5 142 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 LYZL1Q6UWQ5 148 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 TRAPPC6BQ86SZ2 158 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 CROCCP2Q86T23 111 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 TCTE3Q8IZS6 198 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 OR8I2Q8N0Y5 310 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 C10orf126Q8N4M7 172 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 OR4E2Q8NGC2 313 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 HIST1H2BLQ99880 126 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 ZNF471Q9BX82 626 aaPredicted RBP1.1□□□□□ -2.23
XRCC4-204ENST00000509268 TAF9BQ9HBM6 251 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 TXNL4BQ9NX01 149 aaKnown RBP1.1□□□□□ -2.23
XRCC4-204ENST00000509268 MRPL16Q9NX20 251 aaKnown RBP1.1□□□□□ -2.23
XRCC4-204ENST00000509268 NYNRINQ9P2P1 1898 aaKnown RBP1.1□□□□□ -2.23
XRCC4-204ENST00000509268 HSPE1-MOB4S4R3N1 261 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 TAF1LQ8IZX4 1826 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 HEATR5AQ86XA9 2040 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 MYH7BA7E2Y1 1941 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 MEIKINA0A087WXM9 373 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 TRGV5A0A0B4J1U4 118 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 TRAV5A0A0B4J249 113 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 TRAV40A0A0B4J280 105 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 IGHV1-58A0A0C4DH39 117 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 TRBV7-6A0A0J9YX20 115 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 MEIS3P1A6NDR6 274 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 TP53I11O14683 189 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 CREBL2O60519 120 aaPredicted RBP1.09□□□□□ -2.23
XRCC4-204ENST00000509268 GGCTO75223 188 aaKnown RBP1.09□□□□□ -2.23
XRCC4-204ENST00000509268 CST7O76096 145 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 DPM2O94777 84 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 OR2H2O95918 312 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 CLPSP04118 112 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 SHBGP04278 402 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 HRES1P13985 223 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 EVI2AP22794 236 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 SDC2P34741 201 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 HBBP68871 147 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 VMA21Q3ZAQ7 101 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 FAM27BQ5VT28 67 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 TMEM244Q5VVB8 128 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 AMMECR1LQ6DCA0 310 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 SOSTDC1Q6X4U4 206 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 LRRC28Q86X40 367 aaPredicted RBP1.09□□□□□ -2.23
XRCC4-204ENST00000509268 PDZD9Q8IXQ8 264 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 TEX29Q8N6K0 151 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 TSTD1Q8NFU3 115 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 TMEM106AQ96A25 262 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 C2orf88Q9BSF0 95 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 NPCDR1Q9BY65 106 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 SMIM3Q9BZL3 60 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 DUSP21Q9H596 190 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 CBLN4Q9NTU7 201 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 PAIP2BQ9ULR5 123 aaKnown RBP1.09□□□□□ -2.23
XRCC4-204ENST00000509268 EPDR1Q9UM22 224 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 CEP164Q9UPV0 1460 aa1.09□□□□□ -2.23
XRCC4-204ENST00000509268 OTOGLQ3ZCN5 2332 aa1.09□□□□□ -2.24
XRCC4-204ENST00000509268 EML6Q6ZMW3 1958 aa1.09□□□□□ -2.24
XRCC4-204ENST00000509268 SEC16AO15027 2179 aa1.09□□□□□ -2.24
XRCC4-204ENST00000509268 ECM29Q5VYK3 1845 aa1.09□□□□□ -2.24
XRCC4-204ENST00000509268 IGKV2D-24A0A075B6R9 120 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 A0A1B0GVG6 124 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 SLC22A1O15245 554 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 DLEU1O43261 78 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 NDUFB3O43676 98 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 MSMBP08118 114 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 UCHL1P09936 223 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 CRYGAP11844 174 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 FABP2P12104 132 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 CSRP1P21291 193 aaKnown RBP1.08□□□□□ -2.24
XRCC4-204ENST00000509268 S100A1P23297 94 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 RRAS2P62070 204 aaPredicted RBP1.08□□□□□ -2.24
XRCC4-204ENST00000509268 DYNLT1P63172 113 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 BIKQ13323 160 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 TAF9Q16594 264 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 GLYATL3Q5SZD4 288 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 TMEM14EPQ6UXP3 125 aa1.08□□□□□ -2.24
XRCC4-204ENST00000509268 PATE2Q6UY27 113 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms