RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 MPDZO75970 2070 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 ZCCHC11Q5TAX3 1644 aaKnown RBP0.71□□□□□ -2.3
SMN2-208ENST00000508258 ICE1Q9Y2F5 2266 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 MYH11P35749 1972 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 MDC1Q14676 2089 aaKnown RBP0.7□□□□□ -2.3
SMN2-208ENST00000508258 NCAPD3P42695 1498 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 TRGV10A0A0A0MS01 117 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 DUXBA0A1W2PPF3 345 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 FUOMA2VDF0 154 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 RIIAD1A6NNX1 92 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 PGRMC1O00264 195 aaKnown RBP0.7□□□□□ -2.3
SMN2-208ENST00000508258 GGCTO75223 188 aaKnown RBP0.7□□□□□ -2.3
SMN2-208ENST00000508258 CRPP02741 224 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 GPX1P07203 203 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 ASAH2BP0C7U1 165 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 BAALC-AS2P0C853 105 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 UBBP0CG47 229 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 RNASE3P12724 160 aaKnown RBP0.7□□□□□ -2.3
SMN2-208ENST00000508258 UBE2BP63146 152 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 DYNLT1P63172 113 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 PDE6HQ13956 83 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 SCGB2B2Q4G0G5 96 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 BRMS1LQ5PSV4 323 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 BCL2L15Q5TBC7 163 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 STX19Q8N4C7 294 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 NUP35Q8NFH5 326 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 OR2T10Q8NGZ9 312 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 OR10J5Q8NHC4 309 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 ZNF563Q8TA94 476 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 PLEKHB2Q96CS7 222 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 MALSU1Q96EH3 234 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 TEX37Q96LM6 180 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 YPEL2Q96QA6 119 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 PRADC1Q9BSG0 188 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 MRPL32Q9BYC8 188 aaKnown RBP0.7□□□□□ -2.3
SMN2-208ENST00000508258 ATPIF1Q9UII2 106 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 PCTPQ9UKL6 214 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 HS3ST2Q9Y278 367 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 SLC35A3Q9Y2D2 325 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 V9GYQ6 96 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 TRPM1Q7Z4N2 1603 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 CD109Q6YHK3 1445 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 NUMA1Q14980 2115 aa0.7□□□□□ -2.3
SMN2-208ENST00000508258 ZFHX2Q9C0A1 2572 aaPredicted RBP0.69□□□□□ -2.3
SMN2-208ENST00000508258 ADGBQ8N7X0 1667 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 HEATR5AQ86XA9 2040 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 CAMSAP2Q08AD1 1489 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 TRGV2A0A075B6R0 118 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 TRAV1-1A0A0B4J248 108 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 TRBV6-5A0A0K0K1A5 114 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 C2orf70A6NJV1 201 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 TMEM256-PLSCR3K7ERE1 68 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 GPR31O00270 319 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 BANF1O75531 89 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 PIAS1O75925 651 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 APOA2P02652 100 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 IDO1P14902 403 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 GLRXP35754 106 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 SSR2P43308 183 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 INSL3P51460 131 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 SNCBQ16143 134 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 ESRGQ1W209 222 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 C10orf55Q5SWW7 151 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 TMEM78Q5T7P6 136 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 SOSTDC1Q6X4U4 206 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 PHF13Q86YI8 300 aaPredicted RBP0.69□□□□□ -2.3
SMN2-208ENST00000508258 PDZD9Q8IXQ8 264 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 Q8N2B8 174 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 SLC30A7Q8NEW0 376 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 ZHX1-C8orf76Q96EF9 292 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 GPX7Q96SL4 187 aaPredicted RBP0.69□□□□□ -2.3
SMN2-208ENST00000508258 GPER1Q99527 375 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 SELENOSQ9BQE4 189 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 LINC00467Q9BRT7 94 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 TMEM70Q9BUB7 260 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 PBDC1Q9BVG4 233 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 RTL8AQ9BWD3 113 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 OR2J1Q9GZK6 312 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 CYSTM1Q9H1C7 97 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 BCL2L10Q9HD36 194 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 SOX21Q9Y651 276 aaPredicted RBP0.69□□□□□ -2.3
SMN2-208ENST00000508258 MYH7BA7E2Y1 1941 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 OBSL1O75147 1896 aa0.69□□□□□ -2.3
SMN2-208ENST00000508258 KIAA2026Q5HYC2 2103 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 CEP164Q9UPV0 1460 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 CUL9Q8IWT3 2517 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 TRAV3A0A0B4J244 114 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 TRAV12-1A0A0B4J245 112 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 A0A1B0GV72 72 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 NDUFB3O43676 98 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 OR1I1O60431 355 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 CST8O60676 142 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 MRPS14O60783 128 aaKnown RBP0.68□□□□□ -2.3
SMN2-208ENST00000508258 TIMM17BO60830 172 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 LYZL6O75951 148 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 UBL3O95164 117 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 TRGC2P03986 189 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 CRHP06850 196 aa0.68□□□□□ -2.3
SMN2-208ENST00000508258 MGST1P10620 155 aaKnown RBP0.68□□□□□ -2.3
SMN2-208ENST00000508258 OGNP20774 298 aaKnown RBP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms