RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 CLDN12P56749 244 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 TNNC1P63316 161 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 STX3Q13277 289 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 SYCP1Q15431 976 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 ZNHIT3Q15649 155 aaPredicted RBP-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 DNAL1Q4LDG9 190 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 GLYATL3Q5SZD4 288 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 C2orf82Q6UX34 121 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 PLEKHG7Q6ZR37 379 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 Q6ZS49 121 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 ZCCHC23Q6ZST2 131 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 LRRC25Q8N386 305 aaPredicted RBP-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 TMEM161BQ8NDZ6 487 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 OR52R1Q8NGF1 315 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 Q8TAT8 98 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 MRPL30Q8TCC3 161 aaKnown RBP-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 H1FXQ92522 213 aaKnown RBP-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 CNBD2Q96M20 576 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 GPER1Q99527 375 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 BCL7BQ9BQE9 202 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 C6orf62Q9GZU0 229 aaPredicted RBP-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 IDI2-AS1Q9NZ38 188 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 RABL2BQ9UNT1 228 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 POLR1DQ9Y2S0 133 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 FLNBO75369 2602 aaKnown RBP-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 NEO1Q92859 1461 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 LAMB1P07942 1786 aa-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 N4BP2Q86UW6 1770 aaPredicted RBP-0.62□□□□□ -2.51
CLOCK-207ENST00000508049 STAB2Q8WWQ8 2551 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 TRAV10A0A0B4J240 114 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 TINCRA0A1B0GVN0 87 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 C7orf71A4D174 169 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 B4DSR2 109 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 CYB5BO43169 146 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 HMMRO75330 724 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 OR2J2O76002 312 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 ORM1P02763 201 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 CXCL8P10145 99 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 CD79AP11912 226 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 LCN1P31025 176 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 CASQ1P31415 396 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 KDELR2P33947 212 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 MAP2K4P45985 399 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 MT4P47944 62 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 MARCKSL1P49006 195 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 CAV3P56539 151 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 EIF3IQ13347 325 aaKnown RBP-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 TSNQ15631 228 aaKnown RBP-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 GRK1Q15835 563 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 OCIAD2Q56VL3 154 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 LPCAT3Q6P1A2 487 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 HIST2H3AQ71DI3 136 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 TEN1Q86WV5 123 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 CD302Q8IX05 232 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 GDPD1Q8N9F7 314 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 WFDC5Q8TCV5 224 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 DNAJC9Q8WXX5 260 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 CCDC124Q96CT7 223 aaKnown RBP-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 ADAT3Q96EY9 351 aaPredicted RBP-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 OR51I2Q9H344 312 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 FKBP14Q9NWM8 211 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 C1orf109Q9NX04 203 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 UBAP1Q9NZ09 502 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 PCTPQ9UKL6 214 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 APC2O95996 2303 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 AKAP6Q13023 2319 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 CSPG4Q6UVK1 2322 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 HECW2Q9P2P5 1572 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 CHD6Q8TD26 2715 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 PLXNA1Q9UIW2 1896 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 TANC2Q9HCD6 1990 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 PCLOQ9Y6V0 5065 aa-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 MAP1BP46821 2468 aaKnown RBP-0.63□□□□□ -2.51
CLOCK-207ENST00000508049 AKAP11Q9UKA4 1901 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 MYO7BQ6PIF6 2116 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 ACANP16112 2415 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 SETXQ7Z333 2677 aaKnown RBP-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 DLEC1Q9Y238 1755 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 PPRC1Q5VV67 1664 aaKnown RBP-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 A0A096LNT2 108 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 A0A0J9YY99 117 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 TOX3O15405 576 aaPredicted RBP-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 ERC2-IT1O76042 136 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 GADD45GO95257 159 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 HAND1O96004 215 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 IFNA10P01566 189 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 PDE6GP18545 87 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 SYT1P21579 422 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 RNASE4P34096 147 aaKnown RBP-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 ETV6P41212 452 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 CDC34P49427 236 aaPredicted RBP-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 DYNLT1P63172 113 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 HBA1P69905 142 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 COX6A2Q02221 97 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 BATFQ16520 125 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 FBXO48Q5FWF7 155 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 COQ5Q5HYK3 327 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 PATE2Q6UY27 113 aa-0.64□□□□□ -2.51
CLOCK-207ENST00000508049 C4orf22Q6V702 233 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms