RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 DYNLT1P63172 113 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 AKIRIN2Q53H80 203 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 GNPDA2Q8TDQ7 276 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 SLAMF6Q96DU3 332 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 BTF3L4Q96K17 158 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 PRADC1Q9BSG0 188 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 BCL2L10Q9HD36 194 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 ENY2Q9NPA8 101 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 KLK9Q9UKQ9 250 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 FAM32AQ9Y421 112 aaKnown RBP0.8□□□□□ -2.28
LSM6-205ENST00000507449 ALPK2Q86TB3 2170 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 ECM29Q5VYK3 1845 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 POLEQ07864 2286 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 TRBV6-7A0A0A0MS04 114 aa0.79□□□□□ -2.28
LSM6-205ENST00000507449 SERPINA1P01009 418 aa0.79□□□□□ -2.28
LSM6-205ENST00000507449 RHOBP62745 196 aa0.79□□□□□ -2.28
LSM6-205ENST00000507449 RRN3P1Q2M238 152 aa0.79□□□□□ -2.28
LSM6-205ENST00000507449 GOLT1AQ6ZVE7 132 aa0.79□□□□□ -2.28
LSM6-205ENST00000507449 FAM172AQ8WUF8 416 aa0.79□□□□□ -2.28
LSM6-205ENST00000507449 C9orf16Q9BUW7 83 aa0.79□□□□□ -2.28
LSM6-205ENST00000507449 TMEM126AQ9H061 195 aa0.79□□□□□ -2.28
LSM6-205ENST00000507449 ARL2BPQ9Y2Y0 163 aa0.79□□□□□ -2.28
LSM6-205ENST00000507449 RIMBP3CA6NJZ7 1639 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 RIMBP3BA6NNM3 1639 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 RIMBP3Q9UFD9 1639 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 TNRC6BQ9UPQ9 1833 aaKnown RBP0.78□□□□□ -2.28
LSM6-205ENST00000507449 PLXND1Q9Y4D7 1925 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 TRBV19A0A075B6N1 114 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 J3QRK9 145 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 M0R2N4 97 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 PROSCO94903 275 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 GADD45GO95257 159 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 C1QBP02746 253 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 EIF5AP63241 154 aaKnown RBP0.78□□□□□ -2.28
LSM6-205ENST00000507449 PRB3Q04118 309 aaPredicted RBP0.78□□□□□ -2.28
LSM6-205ENST00000507449 SOSTDC1Q6X4U4 206 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 MED12LQ86YW9 2145 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 CLECL1Q8IZS7 167 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 Q8N814 137 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 LINC00301Q8NCQ3 95 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 SLC30A7Q8NEW0 376 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 ACER3Q9NUN7 267 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 ARMC1Q9NVT9 282 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 OPTCQ9UBM4 332 aa0.78□□□□□ -2.28
LSM6-205ENST00000507449 ADGRB2O60241 1585 aa0.78□□□□□ -2.29
LSM6-205ENST00000507449 ARHGEF28Q8N1W1 1705 aaKnown RBP0.78□□□□□ -2.29
LSM6-205ENST00000507449 ATP5HO75947 161 aa0.77□□□□□ -2.29
LSM6-205ENST00000507449 HSPE1P61604 102 aaKnown RBP0.77□□□□□ -2.29
LSM6-205ENST00000507449 KRR1Q13601 381 aaKnown RBP0.77□□□□□ -2.29
LSM6-205ENST00000507449 TAF1AQ15573 450 aaPredicted RBP0.77□□□□□ -2.29
LSM6-205ENST00000507449 LYRM7Q5U5X0 104 aa0.77□□□□□ -2.29
LSM6-205ENST00000507449 PDZD9Q8IXQ8 264 aa0.77□□□□□ -2.29
LSM6-205ENST00000507449 OR2T10Q8NGZ9 312 aa0.77□□□□□ -2.29
LSM6-205ENST00000507449 CHMP6Q96FZ7 201 aa0.77□□□□□ -2.29
LSM6-205ENST00000507449 CHCHD2Q9Y6H1 151 aaPredicted RBP0.77□□□□□ -2.29
LSM6-205ENST00000507449 SCN10AQ9Y5Y9 1956 aa0.77□□□□□ -2.29
LSM6-205ENST00000507449 EXPH5Q8NEV8 1989 aa0.76□□□□□ -2.29
LSM6-205ENST00000507449 FMN1Q68DA7 1419 aa0.76□□□□□ -2.29
LSM6-205ENST00000507449 B4DSR2 109 aa0.76□□□□□ -2.29
LSM6-205ENST00000507449 ZNF736B4DX44 427 aaPredicted RBP0.76□□□□□ -2.29
LSM6-205ENST00000507449 M0R378 163 aa0.76□□□□□ -2.29
LSM6-205ENST00000507449 INE1O15225 51 aa0.76□□□□□ -2.29
LSM6-205ENST00000507449 SRP14P37108 136 aaKnown RBP0.76□□□□□ -2.29
LSM6-205ENST00000507449 ANP32AP39687 249 aaKnown RBP0.76□□□□□ -2.29
LSM6-205ENST00000507449 MRPS15P82914 257 aaKnown RBP0.76□□□□□ -2.29
LSM6-205ENST00000507449 EXOC3-AS1Q8N2X6 119 aa0.76□□□□□ -2.29
LSM6-205ENST00000507449 LINC00526Q96FQ7 95 aa0.76□□□□□ -2.29
LSM6-205ENST00000507449 C14orf132Q9NPU4 83 aa0.76□□□□□ -2.29
LSM6-205ENST00000507449 CDC42SE1Q9NRR8 79 aa0.76□□□□□ -2.29
LSM6-205ENST00000507449 SBF1O95248 1867 aa0.75□□□□□ -2.29
LSM6-205ENST00000507449 ROS1P08922 2347 aa0.75□□□□□ -2.29
LSM6-205ENST00000507449 CCDC160A6NGH7 325 aa0.75□□□□□ -2.29
LSM6-205ENST00000507449 TAX1BP3O14907 124 aa0.75□□□□□ -2.29
LSM6-205ENST00000507449 HMGB3O15347 200 aaKnown RBP0.75□□□□□ -2.29
LSM6-205ENST00000507449 TIMM17BO60830 172 aa0.75□□□□□ -2.29
LSM6-205ENST00000507449 MRPS25P82663 173 aaKnown RBP0.75□□□□□ -2.29
LSM6-205ENST00000507449 DEFB115Q30KQ5 88 aa0.75□□□□□ -2.29
LSM6-205ENST00000507449 C22orf39Q6P5X5 142 aa0.75□□□□□ -2.29
LSM6-205ENST00000507449 TEX261Q6UWH6 196 aa0.75□□□□□ -2.29
LSM6-205ENST00000507449 TEX47Q8TBZ9 253 aa0.75□□□□□ -2.29
LSM6-205ENST00000507449 IMUPQ9GZP8 106 aa0.75□□□□□ -2.29
LSM6-205ENST00000507449 C6orf62Q9GZU0 229 aaPredicted RBP0.75□□□□□ -2.29
LSM6-205ENST00000507449 RASL12Q9NYN1 266 aa0.75□□□□□ -2.29
LSM6-205ENST00000507449 U3KQ87 197 aa0.75□□□□□ -2.29
LSM6-205ENST00000507449 DOCK3Q8IZD9 2030 aa0.75□□□□□ -2.29
LSM6-205ENST00000507449 NDUFB3O43676 98 aa0.74□□□□□ -2.29
LSM6-205ENST00000507449 DHFRP00374 187 aa0.74□□□□□ -2.29
LSM6-205ENST00000507449 ZNF25P17030 456 aaPredicted RBP0.74□□□□□ -2.29
LSM6-205ENST00000507449 ROMO1P60602 79 aa0.74□□□□□ -2.29
LSM6-205ENST00000507449 SPRNQ5BIV9 151 aa0.74□□□□□ -2.29
LSM6-205ENST00000507449 GDF5OSQ5U4N7 250 aa0.74□□□□□ -2.29
LSM6-205ENST00000507449 DHRS4L2Q6PKH6 230 aa0.74□□□□□ -2.29
LSM6-205ENST00000507449 PHB2Q99623 299 aa0.74□□□□□ -2.29
LSM6-205ENST00000507449 MRPL57Q9BQC6 102 aaKnown RBP0.74□□□□□ -2.29
LSM6-205ENST00000507449 MED29Q9NX70 200 aa0.74□□□□□ -2.29
LSM6-205ENST00000507449 ARL5AQ9Y689 179 aa0.74□□□□□ -2.29
LSM6-205ENST00000507449 NCOA6Q14686 2063 aaPredicted RBP0.74□□□□□ -2.29
LSM6-205ENST00000507449 TRGV10A0A0A0MS01 117 aa0.73□□□□□ -2.29
LSM6-205ENST00000507449 TMEM256-PLSCR3K7ERE1 68 aa0.73□□□□□ -2.29
LSM6-205ENST00000507449 IFNA7P01567 189 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms