RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 MAGT1Q9H0U3 335 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 NRN1Q9NPD7 142 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 BLOC1S6Q9UL45 172 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 HLA-DRB4X5D2U9 266 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 A0A0A6YYH2 397 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 A6NJ64 397 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 ZNF705GA8MUZ8 300 aaPredicted RBP4.06□□□□□ -1.76
GYPB-208ENST00000507009 EPM2AB3EWF7 344 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 M0QYG6 137 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 IGKV1-17P01599 117 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 IGKV1-5P01602 117 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 PRM2P04554 102 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 INAFM2P0DMQ5 153 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 OR10J1P30954 320 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 PRSS3P35030 304 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 FUSP35637 526 aaKnown RBP eCLIP4.06□□□□□ -1.76
GYPB-208ENST00000507009 TGFBR1P36897 503 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 RORCP51449 518 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 CLINT1Q14677 625 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 FCN2Q15485 313 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 SP6Q3SY56 376 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 LPCAT3Q6P1A2 487 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 IZUMO2Q6UXV1 221 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 SNX29P2Q8IUI4 249 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 SAMD12Q8N8I0 201 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 C15orf53Q8NAA6 179 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 OR51G1Q8NGK1 321 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 OR1S2Q8NGQ3 325 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 OR4X1Q8NH49 305 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 S100A16Q96FQ6 103 aaKnown RBP4.06□□□□□ -1.76
GYPB-208ENST00000507009 TP53RKQ96S44 253 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 NEU1Q99519 415 aa4.06□□□□□ -1.76
GYPB-208ENST00000507009 HEYLQ9NQ87 328 aaPredicted RBP4.06□□□□□ -1.76
GYPB-208ENST00000507009 TRAV30A0A087WSZ9 112 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 A0A0B4J293 547 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 A0A0G2JRQ6 117 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 IGLC1P0CG04 106 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 RD3LP0DJH9 198 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 ID1P41134 155 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 NKX2-1P43699 371 aaPredicted RBP4.05□□□□□ -1.76
GYPB-208ENST00000507009 CCL18P55774 89 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 KRTAP10-2P60368 255 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 PSG9Q00887 426 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 UBE2NLQ5JXB2 153 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 FAM78BQ5VT40 261 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 EBLN2Q6P2I7 272 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 LYSMD2Q8IV50 215 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 SPARTQ8N0X7 666 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 CADM3Q8N126 398 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 C1orf158Q8N1D5 194 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 ZNRF2Q8NHG8 242 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 NPIPB3Q92617 1050 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 PPP1R14BQ96C90 147 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 RRNAD1Q96FB5 475 aaKnown RBP4.05□□□□□ -1.76
GYPB-208ENST00000507009 UHRF2Q96PU4 802 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 WDR12Q9GZL7 423 aaKnown RBP4.05□□□□□ -1.76
GYPB-208ENST00000507009 SAV1Q9H4B6 383 aaPredicted RBP4.05□□□□□ -1.76
GYPB-208ENST00000507009 LRP1BQ9NZR2 4599 aa4.05□□□□□ -1.76
GYPB-208ENST00000507009 APOBP04114 4563 aaKnown RBP4.05□□□□□ -1.76
GYPB-208ENST00000507009 C3orf85A0A1B0GTC6 90 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 CEBPZOSA8MTT3 80 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 GSTZ1O43708 216 aaPredicted RBP4.04□□□□□ -1.76
GYPB-208ENST00000507009 ATG12O94817 140 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 HTN1P15515 57 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 HTR2BP41595 481 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 RPL5P46777 297 aaKnown RBP4.04□□□□□ -1.76
GYPB-208ENST00000507009 PIGPP57054 158 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 SCAND1P57086 179 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 FAM3BP58499 235 aaPredicted RBP4.04□□□□□ -1.76
GYPB-208ENST00000507009 LYZP61626 148 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 LSM3P62310 102 aaKnown RBP4.04□□□□□ -1.76
GYPB-208ENST00000507009 NEDD8Q15843 81 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 C21orf62-AS1Q17RA5 79 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 PRSS54Q6PEW0 395 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 FOXI2Q6ZQN5 318 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 SSX7Q7RTT5 188 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 ZNF709Q8N972 641 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 SCPEP1Q9HB40 452 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 FAM212BQ9NTI7 297 aaPredicted RBP4.04□□□□□ -1.76
GYPB-208ENST00000507009 KLK11Q9UBX7 282 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 ANAPC10Q9UM13 185 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 LINC00588Q9Y4M8 146 aa4.04□□□□□ -1.76
GYPB-208ENST00000507009 DNAH5Q8TE73 4624 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 A0A0J9YX75 114 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 ZFP92A6NM28 416 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 M0R2Z0 102 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 BUB3O43684 328 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 TOMM40O96008 361 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 PRB4P10163 310 aaPredicted RBP4.03□□□□□ -1.76
GYPB-208ENST00000507009 PSG1P11464 419 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 SLC25A4P12235 298 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 RCVRNP35243 200 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 PSMB3P49720 205 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 GABARAPL2P60520 117 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 YPEL3P61236 119 aaPredicted RBP4.03□□□□□ -1.76
GYPB-208ENST00000507009 OR2F1Q13607 317 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 MEF2DQ14814 521 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 KIR3DS1Q14943 382 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 OXA1LQ15070 435 aa4.03□□□□□ -1.76
GYPB-208ENST00000507009 SPINK13Q1W4C9 94 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms