RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 Q8N2B8 174 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 OR2T10Q8NGZ9 312 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 OR4C6Q8NH72 309 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 OR10J5Q8NHC4 309 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 TEX47Q8TBZ9 253 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 C4orf3Q8WVX3 66 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 AQP3Q92482 292 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 DGCR14Q96DF8 476 aaKnown RBP0.68□□□□□ -2.3
GYPB-207ENST00000506679 LINC00467Q9BRT7 94 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 TMEM133Q9H2Q1 129 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 BAZ2BQ9UIF8 2168 aaKnown RBP0.68□□□□□ -2.3
GYPB-207ENST00000506679 PYCARDQ9ULZ3 195 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 SNURFQ9Y675 71 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 COL4A5P29400 1685 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 EIF3AQ14152 1382 aaKnown RBP0.68□□□□□ -2.3
GYPB-207ENST00000506679 CUL9Q8IWT3 2517 aa0.68□□□□□ -2.3
GYPB-207ENST00000506679 C1orf196B1AJZ1 125 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 HMGB3O15347 200 aaKnown RBP0.67□□□□□ -2.3
GYPB-207ENST00000506679 OR1I1O60431 355 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 GGCTO75223 188 aaKnown RBP0.67□□□□□ -2.3
GYPB-207ENST00000506679 HYPMO75409 117 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 NDUFC2O95298 119 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 C1QBP02746 253 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 ATP5G3P48201 142 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 RAB4BP61018 213 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 KRR1Q13601 381 aaKnown RBP0.67□□□□□ -2.3
GYPB-207ENST00000506679 PDE6HQ13956 83 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 POU6F1Q14863 301 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 TAF1AQ15573 450 aaPredicted RBP0.67□□□□□ -2.3
GYPB-207ENST00000506679 RRN3P1Q2M238 152 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 SCGB2B2Q4G0G5 96 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 BRMS1LQ5PSV4 323 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 BCL2L15Q5TBC7 163 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 HACD4Q5VWC8 232 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.67□□□□□ -2.3
GYPB-207ENST00000506679 LINC00311Q8N616 119 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 OR52R1Q8NGF1 315 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 ADAT3Q96EY9 351 aaPredicted RBP0.67□□□□□ -2.3
GYPB-207ENST00000506679 TMEM70Q9BUB7 260 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 C14orf132Q9NPU4 83 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 ZNF462Q96JM2 2506 aa0.67□□□□□ -2.3
GYPB-207ENST00000506679 ARHGEF28Q8N1W1 1705 aaKnown RBP0.67□□□□□ -2.3
GYPB-207ENST00000506679 EML6Q6ZMW3 1958 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 RP1P56715 2156 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 ALPK2Q86TB3 2170 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 INTS1Q8N201 2190 aaKnown RBP0.66□□□□□ -2.3
GYPB-207ENST00000506679 MUC5BQ9HC84 5762 aaPredicted RBP0.66□□□□□ -2.3
GYPB-207ENST00000506679 A0A087WX48 190 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 TRAV12-1A0A0B4J245 112 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 TRAV1-1A0A0B4J248 108 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 IGKV1-9A0A0C4DH69 117 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 C2orf70A6NJV1 201 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 CLDN25C9JDP6 229 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 ATG12O94817 140 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 MGST1P10620 155 aaKnown RBP0.66□□□□□ -2.3
GYPB-207ENST00000506679 RNASE3P12724 160 aaKnown RBP0.66□□□□□ -2.3
GYPB-207ENST00000506679 NCALDP61601 193 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 RPL19P84098 196 aaKnown RBP0.66□□□□□ -2.3
GYPB-207ENST00000506679 MYL5Q02045 173 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 SURF2Q15527 256 aaPredicted RBP0.66□□□□□ -2.3
GYPB-207ENST00000506679 ESRGQ1W209 222 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 AKR1C8PQ5T2L2 129 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 C22orf39Q6P5X5 142 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 WFDC5Q8TCV5 224 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 SFT2D1Q8WV19 159 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 CANT1Q8WVQ1 401 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 AP3S1Q92572 193 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 TEX37Q96LM6 180 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 PAIP2Q9BPZ3 127 aaKnown RBP0.66□□□□□ -2.3
GYPB-207ENST00000506679 MRPL57Q9BQC6 102 aaKnown RBP0.66□□□□□ -2.3
GYPB-207ENST00000506679 PRADC1Q9BSG0 188 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 CCDC94Q9BW85 323 aaPredicted RBP0.66□□□□□ -2.3
GYPB-207ENST00000506679 REG4Q9BYZ8 158 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 C6orf62Q9GZU0 229 aaPredicted RBP0.66□□□□□ -2.3
GYPB-207ENST00000506679 UTP11Q9Y3A2 253 aaKnown RBP0.66□□□□□ -2.3
GYPB-207ENST00000506679 RIMBP3CA6NJZ7 1639 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 RIMBP3BA6NNM3 1639 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 RIMBP3Q9UFD9 1639 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 DIDO1Q9BTC0 2240 aaKnown RBP0.66□□□□□ -2.3
GYPB-207ENST00000506679 MYH10P35580 1976 aa0.66□□□□□ -2.3
GYPB-207ENST00000506679 DSTQ03001 7570 aaKnown RBP0.66□□□□□ -2.3
GYPB-207ENST00000506679 NEBP20929 6669 aa0.65□□□□□ -2.3
GYPB-207ENST00000506679 MIA2Q96PC5 1412 aa0.65□□□□□ -2.3
GYPB-207ENST00000506679 EXPH5Q8NEV8 1989 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 IGKV2D-26A0A0A0MRZ7 120 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 A8MWV9 139 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 E5RI56 91 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 G3V2T6 193 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 H7C1C5 153 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 HCRTO43612 131 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 LYZL6O75951 148 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 IFNA1P01562 189 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 APOA2P02652 100 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 SRIP30626 198 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 RNASE4P34096 147 aaKnown RBP0.65□□□□□ -2.31
GYPB-207ENST00000506679 PHBP35232 272 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 SSR2P43308 183 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 SERPINB9P50453 376 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 LCN6P62502 163 aa0.65□□□□□ -2.31
GYPB-207ENST00000506679 UBE2BP63146 152 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms