RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 PAFAH1B2P68402 229 aa5.48□□□□□ -1.53
GYPB-206ENST00000506516 GAMTQ14353 236 aa5.48□□□□□ -1.53
GYPB-206ENST00000506516 TIGITQ495A1 244 aa5.48□□□□□ -1.53
GYPB-206ENST00000506516 C11orf87Q6NUJ2 197 aa5.48□□□□□ -1.53
GYPB-206ENST00000506516 BTNL8Q6UX41 500 aa5.48□□□□□ -1.53
GYPB-206ENST00000506516 SLC16A13Q7RTY0 426 aa5.48□□□□□ -1.53
GYPB-206ENST00000506516 NARS2Q96I59 477 aaKnown RBP5.48□□□□□ -1.53
GYPB-206ENST00000506516 METTL26Q96S19 204 aa5.48□□□□□ -1.53
GYPB-206ENST00000506516 MARVELD1Q9BSK0 173 aa5.48□□□□□ -1.53
GYPB-206ENST00000506516 RHPN1-AS1Q9BWJ2 59 aa5.48□□□□□ -1.53
GYPB-206ENST00000506516 TMEM231Q9H6L2 316 aa5.48□□□□□ -1.53
GYPB-206ENST00000506516 MRPL36Q9P0J6 103 aaKnown RBP5.48□□□□□ -1.53
GYPB-206ENST00000506516 NOTCH1P46531 2555 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 H3BP45 60 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 L7N2F9 121 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 CCSO14618 274 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 CHEK1O14757 476 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 TSPAN4O14817 238 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 TSC22D2O75157 780 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 SCAF4O95104 1147 aaKnown RBP5.47□□□□□ -1.53
GYPB-206ENST00000506516 IGKV1-17P01599 117 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 MBPP02686 304 aaPredicted RBP5.47□□□□□ -1.53
GYPB-206ENST00000506516 RLN2P04090 185 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 IGLC1P0CG04 106 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 NHLRC4P0CG21 123 aaPredicted RBP5.47□□□□□ -1.53
GYPB-206ENST00000506516 PVALBP20472 110 aaPredicted RBP5.47□□□□□ -1.53
GYPB-206ENST00000506516 CD81P60033 236 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 VAMP2P63027 116 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 TMEM61Q8N0U2 210 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 CLRN3Q8NCR9 226 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 OR10P1Q8NGE3 313 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 C16orf92Q96LL3 132 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 SPAG8Q99932 426 aaPredicted RBP5.47□□□□□ -1.53
GYPB-206ENST00000506516 B9D2Q9BPU9 175 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 NEURL2Q9BR09 285 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 TUBA4BQ9H853 241 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 ZMAT4Q9H898 229 aa5.47□□□□□ -1.53
GYPB-206ENST00000506516 LSM5Q9Y4Y9 91 aaKnown RBP5.47□□□□□ -1.53
GYPB-206ENST00000506516 IGHV3-49A0A0A0MS15 119 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 C7orf66A4D0T2 115 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 A8MZ25 164 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 OR11H12B2RN74 326 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 SSNA1O43805 119 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 PTTG1O95997 202 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 TOMM40O96008 361 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 CFDP00746 253 aaPredicted RBP5.46□□□□□ -1.54
GYPB-206ENST00000506516 IGHV4-30-4P0DP06 118 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 CRYBB3P26998 211 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 EIF2B2P49770 351 aaKnown RBP5.46□□□□□ -1.54
GYPB-206ENST00000506516 BCAP31P51572 246 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 PAX9P55771 341 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 CMC4P56277 68 aaPredicted RBP5.46□□□□□ -1.54
GYPB-206ENST00000506516 CYCSP99999 105 aaKnown RBP5.46□□□□□ -1.54
GYPB-206ENST00000506516 OR51G1Q8NGK1 321 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 GRAMD2BQ96HH9 432 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 RNF2Q99496 336 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 RABAC1Q9UI14 185 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 RCL1Q9Y2P8 373 aaKnown RBP5.46□□□□□ -1.54
GYPB-206ENST00000506516 SELENOKQ9Y6D0 94 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 NOTCH3Q9UM47 2321 aa5.46□□□□□ -1.54
GYPB-206ENST00000506516 OR4C46A6NHA9 309 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 K7EPK0 472 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 DNASE2O00115 360 aaPredicted RBP5.45□□□□□ -1.54
GYPB-206ENST00000506516 GOSR2O14653 212 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 APOHP02749 345 aaPredicted RBP5.45□□□□□ -1.54
GYPB-206ENST00000506516 IL4P05112 153 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 HNRNPCP07910 306 aaKnown RBP eCLIP5.45□□□□□ -1.54
GYPB-206ENST00000506516 CD7P09564 240 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 FRMD6-AS1P0C7T7 363 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 METTL15P1P0C7V9 234 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 PSG1P11464 419 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 S100A7P31151 101 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 CAV2P51636 162 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 AP2S1P53680 142 aaPredicted RBP5.45□□□□□ -1.54
GYPB-206ENST00000506516 S100A10P60903 97 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 AKR1C1Q04828 323 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 OR8G2PQ6IF36 304 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 TMEM14EPQ6UXP3 125 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 TCF24Q7RTU0 167 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 THAP8Q8NA92 274 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 ST8SIA2Q92186 375 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 ZNF414Q96IQ9 312 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 TRGV9Q99603 122 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 GGACTQ9BVM4 153 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 NMES1Q9C002 83 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 VSIRQ9H7M9 311 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 NPVFQ9HCQ7 196 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 MGAT4CQ9UBM8 478 aa5.45□□□□□ -1.54
GYPB-206ENST00000506516 IGKV3-7A0A075B6H7 116 aa5.44□□□□□ -1.54
GYPB-206ENST00000506516 IGKV1D-37A0A075B6S9 117 aa5.44□□□□□ -1.54
GYPB-206ENST00000506516 IGHV3OR16-13A0A075B7E8 117 aa5.44□□□□□ -1.54
GYPB-206ENST00000506516 IGHV3-74A0A0B4J1X5 117 aa5.44□□□□□ -1.54
GYPB-206ENST00000506516 IGHV3-66A0A0C4DH42 116 aa5.44□□□□□ -1.54
GYPB-206ENST00000506516 SMCO3A2RU48 225 aa5.44□□□□□ -1.54
GYPB-206ENST00000506516 HELTA6NFD8 242 aa5.44□□□□□ -1.54
GYPB-206ENST00000506516 PMS2P5A8MQ11 134 aa5.44□□□□□ -1.54
GYPB-206ENST00000506516 PRSS46E5RG02 174 aa5.44□□□□□ -1.54
GYPB-206ENST00000506516 FNDC10F2Z333 226 aa5.44□□□□□ -1.54
GYPB-206ENST00000506516 DEDDO75618 318 aa5.44□□□□□ -1.54
GYPB-206ENST00000506516 DFFBO76075 338 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms