RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ASCL2Q99929 193 aa12.49□□□□□ -0.41
SNCA-209ENST00000506244 FAM110AQ9BQ89 295 aa12.49□□□□□ -0.41
SNCA-209ENST00000506244 MARVELD1Q9BSK0 173 aa12.49□□□□□ -0.41
SNCA-209ENST00000506244 RABAC1Q9UI14 185 aa12.49□□□□□ -0.41
SNCA-209ENST00000506244 TRAV2A0A0B4J234 112 aa12.48□□□□□ -0.41
SNCA-209ENST00000506244 P2RY1P47900 373 aa12.48□□□□□ -0.41
SNCA-209ENST00000506244 FAM90A2PQ658T7 463 aa12.48□□□□□ -0.41
SNCA-209ENST00000506244 OR8G2PQ6IF36 304 aa12.48□□□□□ -0.41
SNCA-209ENST00000506244 TMEM14EPQ6UXP3 125 aa12.48□□□□□ -0.41
SNCA-209ENST00000506244 LSM5Q9Y4Y9 91 aaKnown RBP12.48□□□□□ -0.41
SNCA-209ENST00000506244 U3KQK5 164 aa12.48□□□□□ -0.41
SNCA-209ENST00000506244 IGKV1D-37A0A075B6S9 117 aa12.47□□□□□ -0.41
SNCA-209ENST00000506244 IGHV3-66A0A0C4DH42 116 aa12.47□□□□□ -0.41
SNCA-209ENST00000506244 SMCO3A2RU48 225 aa12.47□□□□□ -0.41
SNCA-209ENST00000506244 HELTA6NFD8 242 aa12.47□□□□□ -0.41
SNCA-209ENST00000506244 FNDC10F2Z333 226 aa12.47□□□□□ -0.41
SNCA-209ENST00000506244 APOHP02749 345 aaPredicted RBP12.47□□□□□ -0.41
SNCA-209ENST00000506244 RPL11P62913 178 aaKnown RBP12.47□□□□□ -0.41
SNCA-209ENST00000506244 DLK1P80370 383 aa12.47□□□□□ -0.41
SNCA-209ENST00000506244 USF2Q15853 346 aaPredicted RBP12.47□□□□□ -0.41
SNCA-209ENST00000506244 OR10P1Q8NGE3 313 aa12.47□□□□□ -0.41
SNCA-209ENST00000506244 WFDC10AQ9H1F0 79 aa12.47□□□□□ -0.41
SNCA-209ENST00000506244 MGAT4CQ9UBM8 478 aa12.47□□□□□ -0.41
SNCA-209ENST00000506244 IGKV3-7A0A075B6H7 116 aa12.46□□□□□ -0.41
SNCA-209ENST00000506244 C7orf66A4D0T2 115 aa12.46□□□□□ -0.41
SNCA-209ENST00000506244 K7EPK0 472 aa12.46□□□□□ -0.41
SNCA-209ENST00000506244 DNASE2O00115 360 aaPredicted RBP12.46□□□□□ -0.41
SNCA-209ENST00000506244 DFFBO76075 338 aa12.46□□□□□ -0.41
SNCA-209ENST00000506244 PTTG1O95997 202 aa12.46□□□□□ -0.41
SNCA-209ENST00000506244 METTL15P1P0C7V9 234 aa12.46□□□□□ -0.41
SNCA-209ENST00000506244 S100A7P31151 101 aa12.46□□□□□ -0.41
SNCA-209ENST00000506244 AP2S1P53680 142 aaPredicted RBP12.46□□□□□ -0.41
SNCA-209ENST00000506244 PAX9P55771 341 aa12.46□□□□□ -0.41
SNCA-209ENST00000506244 S100A10P60903 97 aa12.46□□□□□ -0.41
SNCA-209ENST00000506244 ZNF90Q03938 601 aa12.46□□□□□ -0.41
SNCA-209ENST00000506244 TMEM144Q7Z5S9 345 aa12.46□□□□□ -0.41
SNCA-209ENST00000506244 SPATA25Q9BR10 227 aa12.46□□□□□ -0.41
SNCA-209ENST00000506244 PBDC1Q9BVG4 233 aa12.46□□□□□ -0.41
SNCA-209ENST00000506244 GOSR2O14653 212 aa12.45□□□□□ -0.42
SNCA-209ENST00000506244 TFPI2P48307 235 aa12.45□□□□□ -0.42
SNCA-209ENST00000506244 CAV2P51636 162 aa12.45□□□□□ -0.42
SNCA-209ENST00000506244 LYZP61626 148 aa12.45□□□□□ -0.42
SNCA-209ENST00000506244 ODF3L2Q3SX64 289 aa12.45□□□□□ -0.42
SNCA-209ENST00000506244 BPIFCQ8NFQ6 507 aa12.45□□□□□ -0.42
SNCA-209ENST00000506244 TM2D3Q9BRN9 247 aa12.45□□□□□ -0.42
SNCA-209ENST00000506244 GGACTQ9BVM4 153 aa12.45□□□□□ -0.42
SNCA-209ENST00000506244 MS4A6AQ9H2W1 248 aa12.45□□□□□ -0.42
SNCA-209ENST00000506244 U3KQE9 123 aa12.45□□□□□ -0.42
SNCA-209ENST00000506244 IGKV1OR2-108A0A075B7D4 117 aa12.44□□□□□ -0.42
SNCA-209ENST00000506244 PMS2P5A8MQ11 134 aa12.44□□□□□ -0.42
SNCA-209ENST00000506244 SSNA1O43805 119 aa12.44□□□□□ -0.42
SNCA-209ENST00000506244 BCAP31P51572 246 aa12.44□□□□□ -0.42
SNCA-209ENST00000506244 CYCSP99999 105 aaKnown RBP12.44□□□□□ -0.42
SNCA-209ENST00000506244 HAGHQ16775 308 aa12.44□□□□□ -0.42
SNCA-209ENST00000506244 GBGT1Q8N5D6 347 aa12.44□□□□□ -0.42
SNCA-209ENST00000506244 STXBP6Q8NFX7 210 aa12.44□□□□□ -0.42
SNCA-209ENST00000506244 GGTLC1Q9BX51 225 aa12.44□□□□□ -0.42
SNCA-209ENST00000506244 UBQLN2Q9UHD9 624 aa12.44□□□□□ -0.42
SNCA-209ENST00000506244 LOC102724200A0A096LPH7 203 aaPredicted RBP12.43□□□□□ -0.42
SNCA-209ENST00000506244 RRAS2P62070 204 aaPredicted RBP12.43□□□□□ -0.42
SNCA-209ENST00000506244 SELENOTP62341 195 aa12.43□□□□□ -0.42
SNCA-209ENST00000506244 OR2F1Q13607 317 aa12.43□□□□□ -0.42
SNCA-209ENST00000506244 RAB32Q13637 225 aa12.43□□□□□ -0.42
SNCA-209ENST00000506244 C16orf54Q6UWD8 224 aa12.43□□□□□ -0.42
SNCA-209ENST00000506244 LINC00322Q6ZN03 302 aaPredicted RBP12.43□□□□□ -0.42
SNCA-209ENST00000506244 STX12Q86Y82 276 aa12.43□□□□□ -0.42
SNCA-209ENST00000506244 LILRB2Q8N423 598 aa12.43□□□□□ -0.42
SNCA-209ENST00000506244 GLMPQ8WWB7 406 aa12.43□□□□□ -0.42
SNCA-209ENST00000506244 PPP1R14BQ96C90 147 aa12.43□□□□□ -0.42
SNCA-209ENST00000506244 RCHY1Q96PM5 261 aa12.43□□□□□ -0.42
SNCA-209ENST00000506244 NMES1Q9C002 83 aa12.43□□□□□ -0.42
SNCA-209ENST00000506244 FBXL17Q9UF56 701 aa12.43□□□□□ -0.42
SNCA-209ENST00000506244 SLC45A2Q9UMX9 530 aa12.43□□□□□ -0.42
SNCA-209ENST00000506244 RBMY1BA6NDE4 496 aaKnown RBP12.42□□□□□ -0.42
SNCA-209ENST00000506244 RBMY1EA6NEQ0 496 aaKnown RBP12.42□□□□□ -0.42
SNCA-209ENST00000506244 BUB3O43684 328 aa12.42□□□□□ -0.42
SNCA-209ENST00000506244 RBMY1DP0C7P1 496 aaKnown RBP12.42□□□□□ -0.42
SNCA-209ENST00000506244 IL15RAQ13261 267 aa12.42□□□□□ -0.42
SNCA-209ENST00000506244 SIGLEC15Q6ZMC9 328 aa12.42□□□□□ -0.42
SNCA-209ENST00000506244 NPVFQ9HCQ7 196 aa12.42□□□□□ -0.42
SNCA-209ENST00000506244 LYRM2Q9NU23 88 aaPredicted RBP12.42□□□□□ -0.42
SNCA-209ENST00000506244 DEDDO75618 318 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 CCNKO75909 580 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 RLN2P04090 185 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 APOC4P55056 127 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 HBG1P69891 147 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 HBG2P69892 147 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 SLC38A11Q08AI6 406 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 C1orf194Q5T5A4 169 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 TEPPQ6URK8 271 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 CYP2G1PQ6ZSU1 146 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 S100A7AQ86SG5 101 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 WFDC3Q8IUB2 231 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 WWC2-AS2Q96NR7 200 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 C11orf1Q9H5F2 150 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 MAP6D1Q9H9H5 199 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 COL7A1Q02388 2944 aa12.41□□□□□ -0.42
SNCA-209ENST00000506244 PET100P0DJ07 73 aa12.4□□□□□ -0.42
SNCA-209ENST00000506244 ZNF546Q86UE3 836 aa12.4□□□□□ -0.42
SNCA-209ENST00000506244 TMEM147Q9BVK8 224 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 436.3 ms